Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 CCT5-215ENST00000625723 135 ntTSL 5 BASIC6.49□□□□□ -1.37
VTA1Q9NP79 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC6.49□□□□□ -1.37
VTA1Q9NP79 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
VTA1Q9NP79 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
VTA1Q9NP79 AL121768.1-201ENST00000613917 2544 ntBASIC6.49□□□□□ -1.37
VTA1Q9NP79 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
VTA1Q9NP79 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.49□□□□□ -1.37
VTA1Q9NP79 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC6.49□□□□□ -1.37
VTA1Q9NP79 IMMTP1-201ENST00000435590 2219 ntBASIC6.49□□□□□ -1.37
VTA1Q9NP79 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
VTA1Q9NP79 AC235565.1-201ENST00000456962 1325 ntBASIC6.49□□□□□ -1.37
VTA1Q9NP79 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.49□□□□□ -1.37
VTA1Q9NP79 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
VTA1Q9NP79 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
VTA1Q9NP79 ZNF849P-201ENST00000594711 1566 ntBASIC6.48□□□□□ -1.37
VTA1Q9NP79 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.48□□□□□ -1.37
VTA1Q9NP79 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
VTA1Q9NP79 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
VTA1Q9NP79 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
VTA1Q9NP79 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.48□□□□□ -1.37
VTA1Q9NP79 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
VTA1Q9NP79 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
VTA1Q9NP79 AC137056.2-201ENST00000624055 1958 ntBASIC6.48□□□□□ -1.37
VTA1Q9NP79 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
VTA1Q9NP79 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
VTA1Q9NP79 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
VTA1Q9NP79 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
VTA1Q9NP79 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
VTA1Q9NP79 U3.7-201ENST00000363668 216 ntBASIC6.48□□□□□ -1.37
VTA1Q9NP79 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
VTA1Q9NP79 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC6.48□□□□□ -1.37
VTA1Q9NP79 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
VTA1Q9NP79 ATF1P1-201ENST00000406040 927 ntBASIC6.48□□□□□ -1.37
VTA1Q9NP79 OR51B3P-201ENST00000412287 913 ntBASIC6.48□□□□□ -1.37
VTA1Q9NP79 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
VTA1Q9NP79 AL133173.1-201ENST00000423458 397 ntBASIC6.48□□□□□ -1.37
VTA1Q9NP79 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.48□□□□□ -1.37
VTA1Q9NP79 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC6.48□□□□□ -1.37
VTA1Q9NP79 Z73417.1-201ENST00000447373 778 ntBASIC6.48□□□□□ -1.37
VTA1Q9NP79 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC6.48□□□□□ -1.37
VTA1Q9NP79 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
VTA1Q9NP79 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC6.48□□□□□ -1.37
VTA1Q9NP79 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
VTA1Q9NP79 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC6.48□□□□□ -1.37
VTA1Q9NP79 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC6.48□□□□□ -1.37
VTA1Q9NP79 SNORA19.3-201ENST00000516165 130 ntBASIC6.48□□□□□ -1.37
VTA1Q9NP79 IGHV3-63-201ENST00000518422 341 ntBASIC6.48□□□□□ -1.37
VTA1Q9NP79 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC6.48□□□□□ -1.37
VTA1Q9NP79 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC6.48□□□□□ -1.37
VTA1Q9NP79 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC6.48□□□□□ -1.37
VTA1Q9NP79 LRRC6P1-201ENST00000532188 885 ntBASIC6.48□□□□□ -1.37
VTA1Q9NP79 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC6.48□□□□□ -1.37
VTA1Q9NP79 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC6.48□□□□□ -1.37
VTA1Q9NP79 AC011611.5-201ENST00000552477 578 ntBASIC6.48□□□□□ -1.37
VTA1Q9NP79 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC6.48□□□□□ -1.37
VTA1Q9NP79 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
VTA1Q9NP79 AL049779.3-201ENST00000557141 606 ntBASIC6.48□□□□□ -1.37
VTA1Q9NP79 ZNF971P-201ENST00000562068 1249 ntBASIC6.48□□□□□ -1.37
VTA1Q9NP79 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC6.48□□□□□ -1.37
VTA1Q9NP79 MIR1269B-201ENST00000580405 75 ntBASIC6.48□□□□□ -1.37
VTA1Q9NP79 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.48□□□□□ -1.37
VTA1Q9NP79 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC6.48□□□□□ -1.37
VTA1Q9NP79 AC025811.1-201ENST00000604312 472 ntBASIC6.48□□□□□ -1.37
VTA1Q9NP79 AC002487.1-201ENST00000604565 994 ntBASIC6.48□□□□□ -1.37
VTA1Q9NP79 AC106052.1-201ENST00000608029 497 ntBASIC6.48□□□□□ -1.37
VTA1Q9NP79 AC211433.2-201ENST00000608433 387 ntBASIC6.48□□□□□ -1.37
VTA1Q9NP79 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
VTA1Q9NP79 AC009159.2-201ENST00000617603 606 ntBASIC6.48□□□□□ -1.37
VTA1Q9NP79 MIR8080-201ENST00000622224 89 ntBASIC6.48□□□□□ -1.37
VTA1Q9NP79 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
VTA1Q9NP79 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
VTA1Q9NP79 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
VTA1Q9NP79 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.48□□□□□ -1.37
VTA1Q9NP79 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
VTA1Q9NP79 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
VTA1Q9NP79 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
VTA1Q9NP79 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC6.47□□□□□ -1.37
VTA1Q9NP79 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC6.47□□□□□ -1.37
VTA1Q9NP79 AC079753.1-201ENST00000623243 3868 ntBASIC6.47□□□□□ -1.37
VTA1Q9NP79 AL034546.1-201ENST00000623740 3693 ntBASIC6.47□□□□□ -1.37
VTA1Q9NP79 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
VTA1Q9NP79 RNA5SP30-201ENST00000365552 115 ntBASIC6.47□□□□□ -1.37
VTA1Q9NP79 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
VTA1Q9NP79 BPHL-201ENST00000380368 797 ntTSL 5 BASIC6.47□□□□□ -1.37
VTA1Q9NP79 RNU6-1005P-201ENST00000384519 107 ntBASIC6.47□□□□□ -1.37
VTA1Q9NP79 RPL7P27-201ENST00000403775 720 ntBASIC6.47□□□□□ -1.37
VTA1Q9NP79 HMGB1P13-201ENST00000406019 642 ntBASIC6.47□□□□□ -1.37
VTA1Q9NP79 MIR1286-201ENST00000408112 78 ntBASIC6.47□□□□□ -1.37
VTA1Q9NP79 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC6.47□□□□□ -1.37
VTA1Q9NP79 MTCO2P21-201ENST00000419780 677 ntBASIC6.47□□□□□ -1.37
VTA1Q9NP79 OSTCP5-201ENST00000425293 453 ntBASIC6.47□□□□□ -1.37
VTA1Q9NP79 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC6.47□□□□□ -1.37
VTA1Q9NP79 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC6.47□□□□□ -1.37
VTA1Q9NP79 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC6.47□□□□□ -1.37
VTA1Q9NP79 NDUFAF4P2-201ENST00000445374 520 ntBASIC6.47□□□□□ -1.37
VTA1Q9NP79 MTATP6P26-201ENST00000445926 662 ntBASIC6.47□□□□□ -1.37
VTA1Q9NP79 MTCYBP11-201ENST00000447254 1109 ntBASIC6.47□□□□□ -1.37
VTA1Q9NP79 AL450023.1-201ENST00000450868 751 ntBASIC6.47□□□□□ -1.37
VTA1Q9NP79 RPS20P4-201ENST00000461659 355 ntBASIC6.47□□□□□ -1.37
VTA1Q9NP79 OR2AO1P-201ENST00000476497 403 ntBASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms