Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC28BQ9BUN5 OR8V1P-201ENST00000395193 873 ntBASIC5.03□□□□□ -1.6
CCDC28BQ9BUN5 AP000580.1-201ENST00000404439 358 ntBASIC5.03□□□□□ -1.6
CCDC28BQ9BUN5 AL121834.1-202ENST00000404494 277 ntBASIC5.03□□□□□ -1.6
CCDC28BQ9BUN5 AL133388.1-201ENST00000404509 287 ntBASIC5.03□□□□□ -1.6
CCDC28BQ9BUN5 OR2AT2P-201ENST00000413438 905 ntBASIC5.03□□□□□ -1.6
CCDC28BQ9BUN5 Z93019.1-201ENST00000416450 973 ntBASIC5.03□□□□□ -1.6
CCDC28BQ9BUN5 AC004690.1-201ENST00000418216 328 ntBASIC5.03□□□□□ -1.6
CCDC28BQ9BUN5 COX6CP13-201ENST00000428703 226 ntBASIC5.03□□□□□ -1.6
CCDC28BQ9BUN5 AC069154.1-201ENST00000432914 542 ntBASIC5.03□□□□□ -1.6
CCDC28BQ9BUN5 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC28BQ9BUN5 AC104634.1-201ENST00000452720 462 ntBASIC5.03□□□□□ -1.6
CCDC28BQ9BUN5 AL356981.1-201ENST00000454879 684 ntBASIC5.03□□□□□ -1.6
CCDC28BQ9BUN5 EIF2S2P5-201ENST00000457635 968 ntBASIC5.03□□□□□ -1.6
CCDC28BQ9BUN5 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC5.03□□□□□ -1.6
CCDC28BQ9BUN5 AP002884.1-201ENST00000479691 655 ntBASIC5.03□□□□□ -1.6
CCDC28BQ9BUN5 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC28BQ9BUN5 RPEP1-201ENST00000504507 658 ntBASIC5.03□□□□□ -1.6
CCDC28BQ9BUN5 AC113398.2-201ENST00000507630 558 ntBASIC5.03□□□□□ -1.6
CCDC28BQ9BUN5 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.03□□□□□ -1.6
CCDC28BQ9BUN5 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.03□□□□□ -1.6
CCDC28BQ9BUN5 AC027308.1-201ENST00000517993 110 ntBASIC5.03□□□□□ -1.6
CCDC28BQ9BUN5 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.03□□□□□ -1.6
CCDC28BQ9BUN5 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.03□□□□□ -1.6
CCDC28BQ9BUN5 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.03□□□□□ -1.6
CCDC28BQ9BUN5 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.03□□□□□ -1.6
CCDC28BQ9BUN5 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.03□□□□□ -1.6
CCDC28BQ9BUN5 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.03□□□□□ -1.6
CCDC28BQ9BUN5 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.03□□□□□ -1.6
CCDC28BQ9BUN5 RPL26P30-202ENST00000602923 645 ntBASIC5.03□□□□□ -1.6
CCDC28BQ9BUN5 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.03□□□□□ -1.6
CCDC28BQ9BUN5 AL133406.3-201ENST00000606817 541 ntBASIC5.03□□□□□ -1.6
CCDC28BQ9BUN5 AC016911.1-201ENST00000613297 452 ntBASIC5.03□□□□□ -1.6
CCDC28BQ9BUN5 AC008115.3-201ENST00000614874 549 ntBASIC5.03□□□□□ -1.6
CCDC28BQ9BUN5 MIR6806-201ENST00000622141 64 ntBASIC5.03□□□□□ -1.6
CCDC28BQ9BUN5 MIR193BHG-214ENST00000641765 509 ntBASIC5.03□□□□□ -1.6
CCDC28BQ9BUN5 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.03□□□□□ -1.6
CCDC28BQ9BUN5 DHX9P1-201ENST00000436565 3076 ntBASIC5.03□□□□□ -1.6
CCDC28BQ9BUN5 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC28BQ9BUN5 AC063976.2-201ENST00000425667 3556 ntBASIC5.03□□□□□ -1.6
CCDC28BQ9BUN5 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC28BQ9BUN5 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.03□□□□□ -1.6
CCDC28BQ9BUN5 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.03□□□□□ -1.6
CCDC28BQ9BUN5 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC28BQ9BUN5 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.03□□□□□ -1.6
CCDC28BQ9BUN5 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.03□□□□□ -1.6
CCDC28BQ9BUN5 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
CCDC28BQ9BUN5 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
CCDC28BQ9BUN5 AC027228.2-201ENST00000567141 2154 ntBASIC5.02□□□□□ -1.61
CCDC28BQ9BUN5 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.02□□□□□ -1.61
CCDC28BQ9BUN5 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.02□□□□□ -1.61
CCDC28BQ9BUN5 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
CCDC28BQ9BUN5 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC28BQ9BUN5 SALL4P2-201ENST00000423288 2910 ntBASIC5.02□□□□□ -1.61
CCDC28BQ9BUN5 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.02□□□□□ -1.61
CCDC28BQ9BUN5 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.02□□□□□ -1.61
CCDC28BQ9BUN5 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
CCDC28BQ9BUN5 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC28BQ9BUN5 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC28BQ9BUN5 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC28BQ9BUN5 SNORA79B-201ENST00000410557 148 ntBASIC5.02□□□□□ -1.61
CCDC28BQ9BUN5 AL596448.1-201ENST00000415024 392 ntBASIC5.02□□□□□ -1.61
CCDC28BQ9BUN5 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.02□□□□□ -1.61
CCDC28BQ9BUN5 AC093155.2-201ENST00000420734 937 ntBASIC5.02□□□□□ -1.61
CCDC28BQ9BUN5 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.02□□□□□ -1.61
CCDC28BQ9BUN5 AC066692.1-201ENST00000421721 457 ntBASIC5.02□□□□□ -1.61
CCDC28BQ9BUN5 GTF2IP2-201ENST00000424290 697 ntBASIC5.02□□□□□ -1.61
CCDC28BQ9BUN5 FMO7P-201ENST00000436045 768 ntBASIC5.02□□□□□ -1.61
CCDC28BQ9BUN5 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.02□□□□□ -1.61
CCDC28BQ9BUN5 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.02□□□□□ -1.61
CCDC28BQ9BUN5 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC5.02□□□□□ -1.61
CCDC28BQ9BUN5 AL445665.1-202ENST00000452436 324 ntBASIC5.02□□□□□ -1.61
CCDC28BQ9BUN5 GYG1P1-201ENST00000460864 698 ntBASIC5.02□□□□□ -1.61
CCDC28BQ9BUN5 AC104339.1-201ENST00000465478 348 ntBASIC5.02□□□□□ -1.61
CCDC28BQ9BUN5 AC108751.2-201ENST00000469993 231 ntBASIC5.02□□□□□ -1.61
CCDC28BQ9BUN5 NIP7P2-201ENST00000485801 544 ntBASIC5.02□□□□□ -1.61
CCDC28BQ9BUN5 DEFB109F-201ENST00000491870 277 ntBASIC5.02□□□□□ -1.61
CCDC28BQ9BUN5 RN7SL612P-201ENST00000497704 295 ntBASIC5.02□□□□□ -1.61
CCDC28BQ9BUN5 AC097173.1-201ENST00000505862 819 ntBASIC5.02□□□□□ -1.61
CCDC28BQ9BUN5 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.02□□□□□ -1.61
CCDC28BQ9BUN5 STMN1P2-201ENST00000508435 439 ntBASIC5.02□□□□□ -1.61
CCDC28BQ9BUN5 RNA5SP271-201ENST00000516700 88 ntBASIC5.02□□□□□ -1.61
CCDC28BQ9BUN5 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.02□□□□□ -1.61
CCDC28BQ9BUN5 AL049872.1-201ENST00000556323 322 ntBASIC5.02□□□□□ -1.61
CCDC28BQ9BUN5 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.02□□□□□ -1.61
CCDC28BQ9BUN5 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
CCDC28BQ9BUN5 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC5.02□□□□□ -1.61
CCDC28BQ9BUN5 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.02□□□□□ -1.61
CCDC28BQ9BUN5 uc_338.18-201ENST00000615451 175 ntBASIC5.02□□□□□ -1.61
CCDC28BQ9BUN5 AF117829.2-201ENST00000619538 361 ntBASIC5.02□□□□□ -1.61
CCDC28BQ9BUN5 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CCDC28BQ9BUN5 AL683826.1-201ENST00000624104 627 ntBASIC5.02□□□□□ -1.61
CCDC28BQ9BUN5 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
CCDC28BQ9BUN5 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC28BQ9BUN5 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC5.02□□□□□ -1.61
CCDC28BQ9BUN5 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC5.02□□□□□ -1.61
CCDC28BQ9BUN5 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.02□□□□□ -1.61
CCDC28BQ9BUN5 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
CCDC28BQ9BUN5 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC28BQ9BUN5 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 127.1 ms