Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
LIM2P55344 C4BPAP1-201ENST00000415474 1893 ntBASIC4.85□□□□□ -1.63
LIM2P55344 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC4.85□□□□□ -1.63
LIM2P55344 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
LIM2P55344 AC112198.2-201ENST00000426589 6996 ntBASIC4.85□□□□□ -1.63
LIM2P55344 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.85□□□□□ -1.63
LIM2P55344 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
LIM2P55344 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
LIM2P55344 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
LIM2P55344 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
LIM2P55344 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.85□□□□□ -1.63
LIM2P55344 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
LIM2P55344 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
LIM2P55344 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
LIM2P55344 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
LIM2P55344 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
LIM2P55344 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
LIM2P55344 AC100778.3-201ENST00000580060 1750 ntBASIC4.84□□□□□ -1.63
LIM2P55344 OFD1P8Y-201ENST00000449148 1433 ntBASIC4.84□□□□□ -1.63
LIM2P55344 CASC19-221ENST00000641309 1382 ntBASIC4.84□□□□□ -1.63
LIM2P55344 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
LIM2P55344 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
LIM2P55344 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC4.84□□□□□ -1.63
LIM2P55344 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
LIM2P55344 AC240504.1-201ENST00000395709 845 ntBASIC4.84□□□□□ -1.63
LIM2P55344 AL589994.1-201ENST00000404962 340 ntBASIC4.84□□□□□ -1.63
LIM2P55344 AL035079.1-201ENST00000405210 287 ntBASIC4.84□□□□□ -1.63
LIM2P55344 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.84□□□□□ -1.63
LIM2P55344 RN7SKP114-201ENST00000410327 279 ntBASIC4.84□□□□□ -1.63
LIM2P55344 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.84□□□□□ -1.63
LIM2P55344 RPL12P43-201ENST00000420608 499 ntBASIC4.84□□□□□ -1.63
LIM2P55344 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.84□□□□□ -1.63
LIM2P55344 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
LIM2P55344 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.84□□□□□ -1.63
LIM2P55344 EEF1B2P5-201ENST00000444820 548 ntBASIC4.84□□□□□ -1.63
LIM2P55344 FCF1P7-201ENST00000451185 558 ntBASIC4.84□□□□□ -1.63
LIM2P55344 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC4.84□□□□□ -1.63
LIM2P55344 MTCYBP14-201ENST00000457471 715 ntBASIC4.84□□□□□ -1.63
LIM2P55344 RN7SL443P-201ENST00000464331 290 ntBASIC4.84□□□□□ -1.63
LIM2P55344 AC097484.1-201ENST00000471148 389 ntBASIC4.84□□□□□ -1.63
LIM2P55344 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.84□□□□□ -1.63
LIM2P55344 RN7SL799P-201ENST00000475891 298 ntBASIC4.84□□□□□ -1.63
LIM2P55344 RPS4XP14-201ENST00000493072 781 ntBASIC4.84□□□□□ -1.63
LIM2P55344 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC4.84□□□□□ -1.63
LIM2P55344 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC4.84□□□□□ -1.63
LIM2P55344 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.84□□□□□ -1.63
LIM2P55344 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC4.84□□□□□ -1.63
LIM2P55344 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.84□□□□□ -1.63
LIM2P55344 AC006349.1-201ENST00000555526 235 ntBASIC4.84□□□□□ -1.63
LIM2P55344 AC011270.1-201ENST00000558606 583 ntBASIC4.84□□□□□ -1.63
LIM2P55344 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC4.84□□□□□ -1.63
LIM2P55344 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.84□□□□□ -1.63
LIM2P55344 AC011447.4-201ENST00000587562 111 ntBASIC4.84□□□□□ -1.63
LIM2P55344 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC4.84□□□□□ -1.63
LIM2P55344 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.84□□□□□ -1.63
LIM2P55344 AL356752.1-201ENST00000615844 593 ntBASIC4.84□□□□□ -1.63
LIM2P55344 AC108359.1-201ENST00000616451 1211 ntBASIC4.84□□□□□ -1.63
LIM2P55344 AC015660.5-201ENST00000623238 564 ntBASIC4.84□□□□□ -1.63
LIM2P55344 AC002044.3-201ENST00000623314 541 ntBASIC4.84□□□□□ -1.63
LIM2P55344 AC243960.7-201ENST00000623532 707 ntBASIC4.84□□□□□ -1.63
LIM2P55344 AC138965.3-201ENST00000623875 498 ntBASIC4.84□□□□□ -1.63
LIM2P55344 AC073869.10-201ENST00000642016 354 ntBASIC4.84□□□□□ -1.63
LIM2P55344 SAMMSON-227ENST00000642114 1199 ntBASIC4.84□□□□□ -1.63
LIM2P55344 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.84□□□□□ -1.63
LIM2P55344 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
LIM2P55344 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
LIM2P55344 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
LIM2P55344 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.84□□□□□ -1.64
LIM2P55344 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
LIM2P55344 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.64
LIM2P55344 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
LIM2P55344 THAP12P5-201ENST00000405864 2275 ntBASIC4.84□□□□□ -1.64
LIM2P55344 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC4.84□□□□□ -1.64
LIM2P55344 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
LIM2P55344 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.84□□□□□ -1.64
LIM2P55344 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
LIM2P55344 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LIM2P55344 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.83□□□□□ -1.64
LIM2P55344 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.83□□□□□ -1.64
LIM2P55344 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
LIM2P55344 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LIM2P55344 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
LIM2P55344 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
LIM2P55344 AC104623.2-202ENST00000623477 4002 ntBASIC4.83□□□□□ -1.64
LIM2P55344 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
LIM2P55344 RN7SKP113-201ENST00000363891 295 ntBASIC4.83□□□□□ -1.64
LIM2P55344 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
LIM2P55344 MRRF-207ENST00000373729 870 ntTSL 3 BASIC4.83□□□□□ -1.64
LIM2P55344 SNORA2.3-201ENST00000383920 135 ntBASIC4.83□□□□□ -1.64
LIM2P55344 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC4.83□□□□□ -1.64
LIM2P55344 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.83□□□□□ -1.64
LIM2P55344 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.83□□□□□ -1.64
LIM2P55344 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.83□□□□□ -1.64
LIM2P55344 AL157385.1-201ENST00000446973 268 ntBASIC4.83□□□□□ -1.64
LIM2P55344 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.83□□□□□ -1.64
LIM2P55344 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC4.83□□□□□ -1.64
LIM2P55344 BX284632.1-201ENST00000478218 541 ntBASIC4.83□□□□□ -1.64
LIM2P55344 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.83□□□□□ -1.64
LIM2P55344 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC4.83□□□□□ -1.64
LIM2P55344 OR10G5P-201ENST00000532733 358 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 135.2 ms