Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.05□□□□□ -1.6
SHMT2P34897 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.05□□□□□ -1.6
SHMT2P34897 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.05□□□□□ -1.6
SHMT2P34897 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC5.05□□□□□ -1.6
SHMT2P34897 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.05□□□□□ -1.6
SHMT2P34897 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.05□□□□□ -1.6
SHMT2P34897 NPM1P48-201ENST00000436002 853 ntBASIC5.05□□□□□ -1.6
SHMT2P34897 EEF1B2P5-201ENST00000444820 548 ntBASIC5.05□□□□□ -1.6
SHMT2P34897 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.05□□□□□ -1.6
SHMT2P34897 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.05□□□□□ -1.6
SHMT2P34897 NOP56P2-201ENST00000447491 769 ntBASIC5.05□□□□□ -1.6
SHMT2P34897 TPT1P1-201ENST00000458495 518 ntBASIC5.05□□□□□ -1.6
SHMT2P34897 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.05□□□□□ -1.6
SHMT2P34897 NIFKP7-201ENST00000503365 834 ntBASIC5.05□□□□□ -1.6
SHMT2P34897 AC093763.2-201ENST00000505334 1223 ntBASIC5.05□□□□□ -1.6
SHMT2P34897 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.05□□□□□ -1.6
SHMT2P34897 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC5.05□□□□□ -1.6
SHMT2P34897 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.05□□□□□ -1.6
SHMT2P34897 OR4A46P-201ENST00000527255 933 ntBASIC5.05□□□□□ -1.6
SHMT2P34897 BMPR1APS2-201ENST00000527904 1012 ntBASIC5.05□□□□□ -1.6
SHMT2P34897 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.05□□□□□ -1.6
SHMT2P34897 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.05□□□□□ -1.6
SHMT2P34897 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.05□□□□□ -1.6
SHMT2P34897 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC5.05□□□□□ -1.6
SHMT2P34897 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.05□□□□□ -1.6
SHMT2P34897 NPM1P45-201ENST00000583151 559 ntBASIC5.05□□□□□ -1.6
SHMT2P34897 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.05□□□□□ -1.6
SHMT2P34897 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.05□□□□□ -1.6
SHMT2P34897 AC011626.1-201ENST00000604710 562 ntBASIC5.05□□□□□ -1.6
SHMT2P34897 AL139407.1-201ENST00000613826 1175 ntBASIC5.05□□□□□ -1.6
SHMT2P34897 AL354950.1-201ENST00000614150 568 ntBASIC5.05□□□□□ -1.6
SHMT2P34897 MIR6839-201ENST00000620425 113 ntBASIC5.05□□□□□ -1.6
SHMT2P34897 AC138627.1-204ENST00000641894 765 ntBASIC5.05□□□□□ -1.6
SHMT2P34897 PANDAR-201ENST00000629595 1506 ntBASIC5.05□□□□□ -1.6
SHMT2P34897 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SHMT2P34897 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.05□□□□□ -1.6
SHMT2P34897 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
SHMT2P34897 AC093591.2-201ENST00000565254 3843 ntBASIC5.05□□□□□ -1.6
SHMT2P34897 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SHMT2P34897 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.04□□□□□ -1.6
SHMT2P34897 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SHMT2P34897 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.04□□□□□ -1.6
SHMT2P34897 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SHMT2P34897 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SHMT2P34897 AC022417.1-201ENST00000624768 1303 ntBASIC5.04□□□□□ -1.6
SHMT2P34897 AL022322.2-201ENST00000624072 20397 ntBASIC5.04□□□□□ -1.6
SHMT2P34897 AC006210.2-201ENST00000367074 1545 ntBASIC5.04□□□□□ -1.6
SHMT2P34897 OR5AQ1P-202ENST00000641257 1534 ntBASIC5.04□□□□□ -1.6
SHMT2P34897 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SHMT2P34897 AC000374.1-201ENST00000434698 1745 ntBASIC5.04□□□□□ -1.6
SHMT2P34897 RNA5SP507-201ENST00000363603 121 ntBASIC5.04□□□□□ -1.6
SHMT2P34897 RNA5SP223-201ENST00000365174 120 ntBASIC5.04□□□□□ -1.6
SHMT2P34897 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SHMT2P34897 MIR105-2-201ENST00000385083 81 ntBASIC5.04□□□□□ -1.6
SHMT2P34897 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.04□□□□□ -1.6
SHMT2P34897 EI24P4-201ENST00000423683 1078 ntBASIC5.04□□□□□ -1.6
SHMT2P34897 AL121578.1-201ENST00000428051 892 ntBASIC5.04□□□□□ -1.6
SHMT2P34897 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.04□□□□□ -1.6
SHMT2P34897 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.04□□□□□ -1.6
SHMT2P34897 SEPT7P3-201ENST00000455017 621 ntBASIC5.04□□□□□ -1.6
SHMT2P34897 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC5.04□□□□□ -1.6
SHMT2P34897 RN7SL814P-201ENST00000487715 300 ntBASIC5.04□□□□□ -1.6
SHMT2P34897 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.04□□□□□ -1.6
SHMT2P34897 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.04□□□□□ -1.6
SHMT2P34897 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SHMT2P34897 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.04□□□□□ -1.6
SHMT2P34897 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.04□□□□□ -1.6
SHMT2P34897 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
SHMT2P34897 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.04□□□□□ -1.6
SHMT2P34897 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC5.04□□□□□ -1.6
SHMT2P34897 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.04□□□□□ -1.6
SHMT2P34897 AC013244.1-201ENST00000604279 193 ntBASIC5.04□□□□□ -1.6
SHMT2P34897 AP005131.7-201ENST00000610087 611 ntBASIC5.04□□□□□ -1.6
SHMT2P34897 AC009163.6-201ENST00000612367 342 ntBASIC5.04□□□□□ -1.6
SHMT2P34897 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
SHMT2P34897 AL122125.1-201ENST00000616999 600 ntBASIC5.04□□□□□ -1.6
SHMT2P34897 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SHMT2P34897 AC118658.2-201ENST00000618697 459 ntBASIC5.04□□□□□ -1.6
SHMT2P34897 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.04□□□□□ -1.6
SHMT2P34897 AC073869.10-201ENST00000642016 354 ntBASIC5.04□□□□□ -1.6
SHMT2P34897 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
SHMT2P34897 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SHMT2P34897 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SHMT2P34897 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.04□□□□□ -1.6
SHMT2P34897 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
SHMT2P34897 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.04□□□□□ -1.6
SHMT2P34897 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.04□□□□□ -1.6
SHMT2P34897 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SHMT2P34897 AC104623.2-202ENST00000623477 4002 ntBASIC5.04□□□□□ -1.6
SHMT2P34897 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SHMT2P34897 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
SHMT2P34897 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SHMT2P34897 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
SHMT2P34897 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SHMT2P34897 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.03□□□□□ -1.6
SHMT2P34897 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SHMT2P34897 AL672167.1-204ENST00000641875 3017 ntBASIC5.03□□□□□ -1.6
SHMT2P34897 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
SHMT2P34897 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.03□□□□□ -1.6
SHMT2P34897 AL450345.1-202ENST00000605741 3881 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms