Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TIMP1P01033 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.52□□□□□ -1.53
TIMP1P01033 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TIMP1P01033 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
TIMP1P01033 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TIMP1P01033 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TIMP1P01033 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TIMP1P01033 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TIMP1P01033 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TIMP1P01033 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TIMP1P01033 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.51□□□□□ -1.53
TIMP1P01033 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TIMP1P01033 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.51□□□□□ -1.53
TIMP1P01033 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.51□□□□□ -1.53
TIMP1P01033 U3.22-201ENST00000391120 215 ntBASIC5.51□□□□□ -1.53
TIMP1P01033 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC5.51□□□□□ -1.53
TIMP1P01033 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC5.51□□□□□ -1.53
TIMP1P01033 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.51□□□□□ -1.53
TIMP1P01033 BX323845.1-201ENST00000432417 179 ntBASIC5.51□□□□□ -1.53
TIMP1P01033 AC073143.1-201ENST00000436316 395 ntBASIC5.51□□□□□ -1.53
TIMP1P01033 AC005154.2-201ENST00000438110 379 ntBASIC5.51□□□□□ -1.53
TIMP1P01033 SLC25A18P1-201ENST00000449385 454 ntBASIC5.51□□□□□ -1.53
TIMP1P01033 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.51□□□□□ -1.53
TIMP1P01033 RPL7P41-201ENST00000485823 957 ntBASIC5.51□□□□□ -1.53
TIMP1P01033 AC097173.1-201ENST00000505862 819 ntBASIC5.51□□□□□ -1.53
TIMP1P01033 ENPP7P9-201ENST00000514456 627 ntBASIC5.51□□□□□ -1.53
TIMP1P01033 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC5.51□□□□□ -1.53
TIMP1P01033 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5.51□□□□□ -1.53
TIMP1P01033 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC5.51□□□□□ -1.53
TIMP1P01033 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TIMP1P01033 AC011453.2-201ENST00000603737 729 ntBASIC5.51□□□□□ -1.53
TIMP1P01033 AL139124.1-201ENST00000609123 421 ntBASIC5.51□□□□□ -1.53
TIMP1P01033 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TIMP1P01033 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
TIMP1P01033 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.51□□□□□ -1.53
TIMP1P01033 FTO-223ENST00000640179 210 ntTSL 5 BASIC5.51□□□□□ -1.53
TIMP1P01033 AP000547.3-204ENST00000588548 2523 ntBASIC5.51□□□□□ -1.53
TIMP1P01033 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TIMP1P01033 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.51□□□□□ -1.53
TIMP1P01033 BCORP1-203ENST00000513194 5093 ntBASIC5.51□□□□□ -1.53
TIMP1P01033 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TIMP1P01033 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.51□□□□□ -1.53
TIMP1P01033 AC120036.2-201ENST00000509729 1474 ntBASIC5.51□□□□□ -1.53
TIMP1P01033 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
TIMP1P01033 AC139713.2-214ENST00000642059 1811 ntBASIC5.51□□□□□ -1.53
TIMP1P01033 AL132656.3-201ENST00000606384 1595 ntBASIC5.5□□□□□ -1.53
TIMP1P01033 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
TIMP1P01033 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
TIMP1P01033 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TIMP1P01033 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TIMP1P01033 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TIMP1P01033 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.5□□□□□ -1.53
TIMP1P01033 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TIMP1P01033 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
TIMP1P01033 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.5□□□□□ -1.53
TIMP1P01033 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC5.5□□□□□ -1.53
TIMP1P01033 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TIMP1P01033 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.5□□□□□ -1.53
TIMP1P01033 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TIMP1P01033 MIR1193-201ENST00000408109 78 ntBASIC5.5□□□□□ -1.53
TIMP1P01033 SNX10-203ENST00000409367 746 ntTSL 5 BASIC5.5□□□□□ -1.53
TIMP1P01033 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC5.5□□□□□ -1.53
TIMP1P01033 GTF2IP5-201ENST00000414608 731 ntBASIC5.5□□□□□ -1.53
TIMP1P01033 AC234779.1-201ENST00000425910 285 ntBASIC5.5□□□□□ -1.53
TIMP1P01033 AC004975.1-201ENST00000428733 208 ntBASIC5.5□□□□□ -1.53
TIMP1P01033 NOP56P2-201ENST00000447491 769 ntBASIC5.5□□□□□ -1.53
TIMP1P01033 PPIAP21-201ENST00000464473 501 ntBASIC5.5□□□□□ -1.53
TIMP1P01033 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.5□□□□□ -1.53
TIMP1P01033 AP003080.1-202ENST00000526526 915 ntBASIC5.5□□□□□ -1.53
TIMP1P01033 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC5.5□□□□□ -1.53
TIMP1P01033 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.5□□□□□ -1.53
TIMP1P01033 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.5□□□□□ -1.53
TIMP1P01033 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.5□□□□□ -1.53
TIMP1P01033 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC5.5□□□□□ -1.53
TIMP1P01033 AC011626.1-201ENST00000604710 562 ntBASIC5.5□□□□□ -1.53
TIMP1P01033 AC005377.1-201ENST00000605126 456 ntBASIC5.5□□□□□ -1.53
TIMP1P01033 AC069542.2-201ENST00000624816 216 ntBASIC5.5□□□□□ -1.53
TIMP1P01033 OR52H1-202ENST00000641796 1061 ntBASIC5.5□□□□□ -1.53
TIMP1P01033 AC007159.1-201ENST00000566529 4706 ntBASIC5.5□□□□□ -1.53
TIMP1P01033 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.5□□□□□ -1.53
TIMP1P01033 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
TIMP1P01033 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.5□□□□□ -1.53
TIMP1P01033 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
TIMP1P01033 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TIMP1P01033 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC5.5□□□□□ -1.53
TIMP1P01033 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.49□□□□□ -1.53
TIMP1P01033 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.49□□□□□ -1.53
TIMP1P01033 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.49□□□□□ -1.53
TIMP1P01033 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.49□□□□□ -1.53
TIMP1P01033 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TIMP1P01033 MFSD8-220ENST00000641243 1422 ntBASIC5.49□□□□□ -1.53
TIMP1P01033 OR5AQ1P-203ENST00000641818 1529 ntBASIC5.49□□□□□ -1.53
TIMP1P01033 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.49□□□□□ -1.53
TIMP1P01033 AL449283.1-201ENST00000602631 3403 ntBASIC5.49□□□□□ -1.53
TIMP1P01033 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
TIMP1P01033 MIR589-201ENST00000385238 99 ntBASIC5.49□□□□□ -1.53
TIMP1P01033 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
TIMP1P01033 U3.28-201ENST00000391249 210 ntBASIC5.49□□□□□ -1.53
TIMP1P01033 RN7SKP106-201ENST00000410832 272 ntBASIC5.49□□□□□ -1.53
TIMP1P01033 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms