Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
HMGB1P1B2RPK0 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
HMGB1P1B2RPK0 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.75□□□□□ -1.49
HMGB1P1B2RPK0 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.75□□□□□ -1.49
HMGB1P1B2RPK0 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HMGB1P1B2RPK0 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
HMGB1P1B2RPK0 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HMGB1P1B2RPK0 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
HMGB1P1B2RPK0 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
HMGB1P1B2RPK0 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HMGB1P1B2RPK0 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HMGB1P1B2RPK0 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
HMGB1P1B2RPK0 HSPD1P16-201ENST00000402302 394 ntBASIC5.75□□□□□ -1.49
HMGB1P1B2RPK0 AL132875.1-201ENST00000403623 949 ntBASIC5.75□□□□□ -1.49
HMGB1P1B2RPK0 RNA5SP155-201ENST00000411154 129 ntBASIC5.75□□□□□ -1.49
HMGB1P1B2RPK0 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC5.75□□□□□ -1.49
HMGB1P1B2RPK0 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC5.75□□□□□ -1.49
HMGB1P1B2RPK0 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC5.75□□□□□ -1.49
HMGB1P1B2RPK0 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.75□□□□□ -1.49
HMGB1P1B2RPK0 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC5.75□□□□□ -1.49
HMGB1P1B2RPK0 HSPD1P12-201ENST00000429127 1069 ntBASIC5.75□□□□□ -1.49
HMGB1P1B2RPK0 RPL7AP49-201ENST00000429522 581 ntBASIC5.75□□□□□ -1.49
HMGB1P1B2RPK0 AL591438.1-201ENST00000433508 581 ntBASIC5.75□□□□□ -1.49
HMGB1P1B2RPK0 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC5.75□□□□□ -1.49
HMGB1P1B2RPK0 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC5.75□□□□□ -1.49
HMGB1P1B2RPK0 AL592114.2-201ENST00000440142 532 ntBASIC5.75□□□□□ -1.49
HMGB1P1B2RPK0 BTBD7P2-201ENST00000441962 620 ntBASIC5.75□□□□□ -1.49
HMGB1P1B2RPK0 AC234771.2-201ENST00000445718 597 ntBASIC5.75□□□□□ -1.49
HMGB1P1B2RPK0 FTLP8-201ENST00000446770 267 ntBASIC5.75□□□□□ -1.49
HMGB1P1B2RPK0 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
HMGB1P1B2RPK0 PRPF38AP1-201ENST00000451976 933 ntBASIC5.75□□□□□ -1.49
HMGB1P1B2RPK0 AC002553.3-201ENST00000453002 341 ntBASIC5.75□□□□□ -1.49
HMGB1P1B2RPK0 RPS23P2-201ENST00000463671 415 ntBASIC5.75□□□□□ -1.49
HMGB1P1B2RPK0 AC239804.1-201ENST00000466343 869 ntTSL 5 BASIC5.75□□□□□ -1.49
HMGB1P1B2RPK0 MYL12BP2-201ENST00000503948 512 ntBASIC5.75□□□□□ -1.49
HMGB1P1B2RPK0 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC5.75□□□□□ -1.49
HMGB1P1B2RPK0 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.75□□□□□ -1.49
HMGB1P1B2RPK0 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC5.75□□□□□ -1.49
HMGB1P1B2RPK0 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC5.75□□□□□ -1.49
HMGB1P1B2RPK0 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
HMGB1P1B2RPK0 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC5.75□□□□□ -1.49
HMGB1P1B2RPK0 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC5.75□□□□□ -1.49
HMGB1P1B2RPK0 SNRPGP1-201ENST00000553864 222 ntBASIC5.75□□□□□ -1.49
HMGB1P1B2RPK0 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC5.75□□□□□ -1.49
HMGB1P1B2RPK0 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.75□□□□□ -1.49
HMGB1P1B2RPK0 FCGR1CP-201ENST00000579737 1127 ntBASIC5.75□□□□□ -1.49
HMGB1P1B2RPK0 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC5.75□□□□□ -1.49
HMGB1P1B2RPK0 AL031429.2-201ENST00000602605 649 ntBASIC5.75□□□□□ -1.49
HMGB1P1B2RPK0 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.75□□□□□ -1.49
HMGB1P1B2RPK0 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC5.75□□□□□ -1.49
HMGB1P1B2RPK0 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
HMGB1P1B2RPK0 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC5.75□□□□□ -1.49
HMGB1P1B2RPK0 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC5.75□□□□□ -1.49
HMGB1P1B2RPK0 OR52B5P-202ENST00000641118 1110 ntBASIC5.75□□□□□ -1.49
HMGB1P1B2RPK0 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.75□□□□□ -1.49
HMGB1P1B2RPK0 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC5.75□□□□□ -1.49
HMGB1P1B2RPK0 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
HMGB1P1B2RPK0 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.75□□□□□ -1.49
HMGB1P1B2RPK0 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.75□□□□□ -1.49
HMGB1P1B2RPK0 HSP90AA5P-201ENST00000438353 2192 ntBASIC5.74□□□□□ -1.49
HMGB1P1B2RPK0 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HMGB1P1B2RPK0 MFSD8-220ENST00000641243 1422 ntBASIC5.74□□□□□ -1.49
HMGB1P1B2RPK0 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HMGB1P1B2RPK0 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HMGB1P1B2RPK0 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
HMGB1P1B2RPK0 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HMGB1P1B2RPK0 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
HMGB1P1B2RPK0 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.74□□□□□ -1.49
HMGB1P1B2RPK0 METTL21EP-201ENST00000298105 713 ntBASIC5.74□□□□□ -1.49
HMGB1P1B2RPK0 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
HMGB1P1B2RPK0 SNORA21-201ENST00000362423 132 ntBASIC5.74□□□□□ -1.49
HMGB1P1B2RPK0 MIR130A-201ENST00000385274 89 ntBASIC5.74□□□□□ -1.49
HMGB1P1B2RPK0 RN7SKP97-201ENST00000410966 333 ntBASIC5.74□□□□□ -1.49
HMGB1P1B2RPK0 RN7SKP205-201ENST00000410999 307 ntBASIC5.74□□□□□ -1.49
HMGB1P1B2RPK0 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.74□□□□□ -1.49
HMGB1P1B2RPK0 TATDN1P1-201ENST00000414123 891 ntBASIC5.74□□□□□ -1.49
HMGB1P1B2RPK0 AL360013.1-201ENST00000419031 858 ntBASIC5.74□□□□□ -1.49
HMGB1P1B2RPK0 ELOBP4-201ENST00000423418 296 ntBASIC5.74□□□□□ -1.49
HMGB1P1B2RPK0 FAM204CP-201ENST00000424489 642 ntBASIC5.74□□□□□ -1.49
HMGB1P1B2RPK0 RIMKLBP2-201ENST00000424737 654 ntBASIC5.74□□□□□ -1.49
HMGB1P1B2RPK0 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HMGB1P1B2RPK0 AC130360.1-201ENST00000425489 1117 ntBASIC5.74□□□□□ -1.49
HMGB1P1B2RPK0 PSMD10P2-201ENST00000432890 672 ntBASIC5.74□□□□□ -1.49
HMGB1P1B2RPK0 NANOGP9-201ENST00000439890 892 ntBASIC5.74□□□□□ -1.49
HMGB1P1B2RPK0 AL645936.1-201ENST00000441979 518 ntBASIC5.74□□□□□ -1.49
HMGB1P1B2RPK0 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC5.74□□□□□ -1.49
HMGB1P1B2RPK0 RPS18P1-201ENST00000447840 458 ntBASIC5.74□□□□□ -1.49
HMGB1P1B2RPK0 AC092685.1-201ENST00000447960 1243 ntBASIC5.74□□□□□ -1.49
HMGB1P1B2RPK0 AL645937.3-201ENST00000453647 936 ntBASIC5.74□□□□□ -1.49
HMGB1P1B2RPK0 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.74□□□□□ -1.49
HMGB1P1B2RPK0 AP000797.2-201ENST00000475768 606 ntBASIC5.74□□□□□ -1.49
HMGB1P1B2RPK0 AL035404.1-201ENST00000497982 568 ntBASIC5.74□□□□□ -1.49
HMGB1P1B2RPK0 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC5.74□□□□□ -1.49
HMGB1P1B2RPK0 AC091912.1-201ENST00000511351 248 ntBASIC5.74□□□□□ -1.49
HMGB1P1B2RPK0 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.74□□□□□ -1.49
HMGB1P1B2RPK0 RN7SKP253-201ENST00000516424 309 ntBASIC5.74□□□□□ -1.49
HMGB1P1B2RPK0 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC5.74□□□□□ -1.49
HMGB1P1B2RPK0 AC092709.1-201ENST00000521355 1045 ntBASIC5.74□□□□□ -1.49
HMGB1P1B2RPK0 AC130365.2-201ENST00000525882 1201 ntBASIC5.74□□□□□ -1.49
HMGB1P1B2RPK0 AC103855.4-201ENST00000533158 265 ntBASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms