Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 CR382285.2-201ENST00000624662 1495 ntBASIC2.52□□□□□ -2.01
LINC01558Q9Y6Z2 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC2.52□□□□□ -2.01
LINC01558Q9Y6Z2 AL592437.2-201ENST00000421655 2434 ntBASIC2.52□□□□□ -2.01
LINC01558Q9Y6Z2 CYP1D1P-201ENST00000416662 1433 ntBASIC2.52□□□□□ -2.01
LINC01558Q9Y6Z2 AC007342.7-201ENST00000624610 2337 ntBASIC2.52□□□□□ -2.01
LINC01558Q9Y6Z2 IKZF3-214ENST00000467757 1362 ntTSL 5 BASIC2.52□□□□□ -2.01
LINC01558Q9Y6Z2 RNA5SP30-201ENST00000365552 115 ntBASIC2.52□□□□□ -2.01
LINC01558Q9Y6Z2 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC2.52□□□□□ -2.01
LINC01558Q9Y6Z2 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
LINC01558Q9Y6Z2 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
LINC01558Q9Y6Z2 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC2.52□□□□□ -2.01
LINC01558Q9Y6Z2 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
LINC01558Q9Y6Z2 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
LINC01558Q9Y6Z2 MIR181C-201ENST00000384881 110 ntBASIC2.52□□□□□ -2.01
LINC01558Q9Y6Z2 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
LINC01558Q9Y6Z2 AC004386.1-201ENST00000393214 761 ntBASIC2.52□□□□□ -2.01
LINC01558Q9Y6Z2 AL132875.1-201ENST00000403623 949 ntBASIC2.52□□□□□ -2.01
LINC01558Q9Y6Z2 AL079341.1-201ENST00000404701 1207 ntBASIC2.52□□□□□ -2.01
LINC01558Q9Y6Z2 AC016739.1-201ENST00000405359 345 ntBASIC2.52□□□□□ -2.01
LINC01558Q9Y6Z2 RN7SKP146-201ENST00000410242 334 ntBASIC2.52□□□□□ -2.01
LINC01558Q9Y6Z2 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC2.52□□□□□ -2.01
LINC01558Q9Y6Z2 AC002127.1-201ENST00000421305 225 ntBASIC2.52□□□□□ -2.01
LINC01558Q9Y6Z2 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC2.52□□□□□ -2.01
LINC01558Q9Y6Z2 AC017083.1-201ENST00000428093 483 ntBASIC2.52□□□□□ -2.01
LINC01558Q9Y6Z2 AC092098.1-201ENST00000429245 874 ntBASIC2.52□□□□□ -2.01
LINC01558Q9Y6Z2 AC009299.1-201ENST00000429684 717 ntBASIC2.52□□□□□ -2.01
LINC01558Q9Y6Z2 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC2.52□□□□□ -2.01
LINC01558Q9Y6Z2 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
LINC01558Q9Y6Z2 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC2.52□□□□□ -2.01
LINC01558Q9Y6Z2 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
LINC01558Q9Y6Z2 AF228730.2-201ENST00000438784 848 ntBASIC2.52□□□□□ -2.01
LINC01558Q9Y6Z2 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC2.52□□□□□ -2.01
LINC01558Q9Y6Z2 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
LINC01558Q9Y6Z2 RPS27AP15-201ENST00000447672 466 ntBASIC2.52□□□□□ -2.01
LINC01558Q9Y6Z2 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC2.52□□□□□ -2.01
LINC01558Q9Y6Z2 SNRPGP5-201ENST00000456003 220 ntBASIC2.52□□□□□ -2.01
LINC01558Q9Y6Z2 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC2.52□□□□□ -2.01
LINC01558Q9Y6Z2 RPS7P10-201ENST00000464254 603 ntBASIC2.52□□□□□ -2.01
LINC01558Q9Y6Z2 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC2.52□□□□□ -2.01
LINC01558Q9Y6Z2 TAAR3P-202ENST00000481759 1025 ntBASIC2.52□□□□□ -2.01
LINC01558Q9Y6Z2 RN7SL104P-201ENST00000498686 293 ntBASIC2.52□□□□□ -2.01
LINC01558Q9Y6Z2 AC008629.1-201ENST00000506486 812 ntTSL 3 BASIC2.52□□□□□ -2.01
LINC01558Q9Y6Z2 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC2.52□□□□□ -2.01
LINC01558Q9Y6Z2 IGHVII-22-1-201ENST00000517888 265 ntBASIC2.52□□□□□ -2.01
LINC01558Q9Y6Z2 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC2.52□□□□□ -2.01
LINC01558Q9Y6Z2 TMEM126A-206ENST00000532180 643 ntTSL 3 BASIC2.52□□□□□ -2.01
LINC01558Q9Y6Z2 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
LINC01558Q9Y6Z2 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC2.52□□□□□ -2.01
LINC01558Q9Y6Z2 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
LINC01558Q9Y6Z2 AC005519.1-201ENST00000554490 601 ntBASIC2.52□□□□□ -2.01
LINC01558Q9Y6Z2 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC2.52□□□□□ -2.01
LINC01558Q9Y6Z2 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC2.52□□□□□ -2.01
LINC01558Q9Y6Z2 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC2.52□□□□□ -2.01
LINC01558Q9Y6Z2 AC018552.3-201ENST00000567416 561 ntBASIC2.52□□□□□ -2.01
LINC01558Q9Y6Z2 STARD6-202ENST00000577499 696 ntTSL 2 BASIC2.52□□□□□ -2.01
LINC01558Q9Y6Z2 MYL12A-206ENST00000578611 1004 ntAPPRIS P1 TSL 3 BASIC2.52□□□□□ -2.01
LINC01558Q9Y6Z2 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC2.52□□□□□ -2.01
LINC01558Q9Y6Z2 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC2.52□□□□□ -2.01
LINC01558Q9Y6Z2 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC2.52□□□□□ -2.01
LINC01558Q9Y6Z2 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC2.52□□□□□ -2.01
LINC01558Q9Y6Z2 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC2.52□□□□□ -2.01
LINC01558Q9Y6Z2 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC2.52□□□□□ -2.01
LINC01558Q9Y6Z2 CARSP1-201ENST00000603171 889 ntBASIC2.52□□□□□ -2.01
LINC01558Q9Y6Z2 AL161931.1-201ENST00000612768 246 ntBASIC2.52□□□□□ -2.01
LINC01558Q9Y6Z2 AL138721.1-201ENST00000616756 179 ntBASIC2.52□□□□□ -2.01
LINC01558Q9Y6Z2 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
LINC01558Q9Y6Z2 U7.8-201ENST00000619968 63 ntBASIC2.52□□□□□ -2.01
LINC01558Q9Y6Z2 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC2.52□□□□□ -2.01
LINC01558Q9Y6Z2 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC2.52□□□□□ -2.01
LINC01558Q9Y6Z2 SMG7-216ENST00000638826 219 ntTSL 2 BASIC2.52□□□□□ -2.01
LINC01558Q9Y6Z2 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
LINC01558Q9Y6Z2 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
LINC01558Q9Y6Z2 AC106871.1-201ENST00000568324 3102 ntBASIC2.52□□□□□ -2.01
LINC01558Q9Y6Z2 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
LINC01558Q9Y6Z2 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
LINC01558Q9Y6Z2 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
LINC01558Q9Y6Z2 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC2.51□□□□□ -2.01
LINC01558Q9Y6Z2 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC2.51□□□□□ -2.01
LINC01558Q9Y6Z2 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
LINC01558Q9Y6Z2 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
LINC01558Q9Y6Z2 AC010132.4-201ENST00000569883 1368 ntBASIC2.51□□□□□ -2.01
LINC01558Q9Y6Z2 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
LINC01558Q9Y6Z2 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
LINC01558Q9Y6Z2 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
LINC01558Q9Y6Z2 OR1K1-201ENST00000277309 951 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
LINC01558Q9Y6Z2 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC2.51□□□□□ -2.01
LINC01558Q9Y6Z2 RNU1-15P-201ENST00000353977 144 ntBASIC2.51□□□□□ -2.01
LINC01558Q9Y6Z2 RNA5SP152-201ENST00000365184 110 ntBASIC2.51□□□□□ -2.01
LINC01558Q9Y6Z2 S100B-203ENST00000397648 839 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
LINC01558Q9Y6Z2 OR7E91P-201ENST00000400027 866 ntBASIC2.51□□□□□ -2.01
LINC01558Q9Y6Z2 NPPA-AS1-201ENST00000400892 936 ntTSL 3 BASIC2.51□□□□□ -2.01
LINC01558Q9Y6Z2 RPL5P19-201ENST00000404228 893 ntBASIC2.51□□□□□ -2.01
LINC01558Q9Y6Z2 MIR1249-201ENST00000408671 66 ntBASIC2.51□□□□□ -2.01
LINC01558Q9Y6Z2 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
LINC01558Q9Y6Z2 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC2.51□□□□□ -2.01
LINC01558Q9Y6Z2 CDY17P-201ENST00000414121 1282 ntBASIC2.51□□□□□ -2.01
LINC01558Q9Y6Z2 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC2.51□□□□□ -2.01
LINC01558Q9Y6Z2 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC2.51□□□□□ -2.01
LINC01558Q9Y6Z2 VN1R37P-201ENST00000419096 748 ntBASIC2.51□□□□□ -2.01
LINC01558Q9Y6Z2 RPL7AP51-201ENST00000422016 760 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms