Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC8.71□□□□□ -1.02
PDZRN3Q9UPQ7 PLA2G12AP2-201ENST00000424744 264 ntBASIC8.71□□□□□ -1.02
PDZRN3Q9UPQ7 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC8.71□□□□□ -1.02
PDZRN3Q9UPQ7 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
PDZRN3Q9UPQ7 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC8.71□□□□□ -1.02
PDZRN3Q9UPQ7 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC8.71□□□□□ -1.02
PDZRN3Q9UPQ7 OR6R1P-201ENST00000431838 940 ntBASIC8.71□□□□□ -1.02
PDZRN3Q9UPQ7 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.02
PDZRN3Q9UPQ7 AL050321.1-201ENST00000432363 400 ntBASIC8.71□□□□□ -1.02
PDZRN3Q9UPQ7 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC8.71□□□□□ -1.02
PDZRN3Q9UPQ7 PMS2P9-201ENST00000441237 515 ntBASIC8.71□□□□□ -1.02
PDZRN3Q9UPQ7 HMGB3P9-201ENST00000441799 583 ntBASIC8.71□□□□□ -1.02
PDZRN3Q9UPQ7 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC8.71□□□□□ -1.02
PDZRN3Q9UPQ7 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC8.71□□□□□ -1.02
PDZRN3Q9UPQ7 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
PDZRN3Q9UPQ7 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.02
PDZRN3Q9UPQ7 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC8.71□□□□□ -1.02
PDZRN3Q9UPQ7 AURKAPS1-201ENST00000451805 1212 ntBASIC8.71□□□□□ -1.02
PDZRN3Q9UPQ7 DHFRP3-201ENST00000455595 559 ntBASIC8.71□□□□□ -1.02
PDZRN3Q9UPQ7 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC8.71□□□□□ -1.02
PDZRN3Q9UPQ7 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC8.71□□□□□ -1.02
PDZRN3Q9UPQ7 RPS3AP17-201ENST00000472594 777 ntBASIC8.71□□□□□ -1.02
PDZRN3Q9UPQ7 RPS27P20-201ENST00000492051 246 ntBASIC8.71□□□□□ -1.02
PDZRN3Q9UPQ7 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC8.71□□□□□ -1.02
PDZRN3Q9UPQ7 AC090058.1-201ENST00000498788 435 ntBASIC8.71□□□□□ -1.02
PDZRN3Q9UPQ7 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC8.71□□□□□ -1.02
PDZRN3Q9UPQ7 AC010342.1-201ENST00000514047 877 ntBASIC8.71□□□□□ -1.02
PDZRN3Q9UPQ7 OR7E10P-201ENST00000526420 991 ntBASIC8.71□□□□□ -1.02
PDZRN3Q9UPQ7 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC8.71□□□□□ -1.02
PDZRN3Q9UPQ7 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC8.71□□□□□ -1.02
PDZRN3Q9UPQ7 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC8.71□□□□□ -1.02
PDZRN3Q9UPQ7 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
PDZRN3Q9UPQ7 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC8.71□□□□□ -1.02
PDZRN3Q9UPQ7 AC008507.1-201ENST00000587506 734 ntBASIC8.71□□□□□ -1.02
PDZRN3Q9UPQ7 AC006504.6-201ENST00000590142 199 ntBASIC8.71□□□□□ -1.02
PDZRN3Q9UPQ7 AC007255.2-201ENST00000604053 631 ntBASIC8.71□□□□□ -1.02
PDZRN3Q9UPQ7 SNORA35B-201ENST00000607417 129 ntBASIC8.71□□□□□ -1.02
PDZRN3Q9UPQ7 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC8.71□□□□□ -1.02
PDZRN3Q9UPQ7 AC089999.3-201ENST00000622440 577 ntBASIC8.71□□□□□ -1.02
PDZRN3Q9UPQ7 ALG13-230ENST00000623189 458 ntTSL 3 BASIC8.71□□□□□ -1.02
PDZRN3Q9UPQ7 AC005858.4-201ENST00000623191 700 ntBASIC8.71□□□□□ -1.02
PDZRN3Q9UPQ7 AC073592.6-201ENST00000624271 415 ntBASIC8.71□□□□□ -1.02
PDZRN3Q9UPQ7 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC8.71□□□□□ -1.02
PDZRN3Q9UPQ7 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC8.71□□□□□ -1.02
PDZRN3Q9UPQ7 5S_rRNA.29-201ENST00000641250 107 ntBASIC8.71□□□□□ -1.02
PDZRN3Q9UPQ7 AC007938.1-201ENST00000562524 2902 ntBASIC8.71□□□□□ -1.02
PDZRN3Q9UPQ7 AP002833.3-201ENST00000625075 2265 ntBASIC8.71□□□□□ -1.02
PDZRN3Q9UPQ7 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC8.71□□□□□ -1.02
PDZRN3Q9UPQ7 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
PDZRN3Q9UPQ7 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
PDZRN3Q9UPQ7 MAPK10-344ENST00000641718 3746 ntBASIC8.71□□□□□ -1.02
PDZRN3Q9UPQ7 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
PDZRN3Q9UPQ7 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC8.71□□□□□ -1.02
PDZRN3Q9UPQ7 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
PDZRN3Q9UPQ7 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC8.71□□□□□ -1.02
PDZRN3Q9UPQ7 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC8.7□□□□□ -1.02
PDZRN3Q9UPQ7 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
PDZRN3Q9UPQ7 ZEB2-227ENST00000627532 9541 ntAPPRIS P2 TSL 1 (best) BASIC8.7□□□□□ -1.02
PDZRN3Q9UPQ7 AP002800.1-201ENST00000624982 2225 ntBASIC8.7□□□□□ -1.02
PDZRN3Q9UPQ7 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
PDZRN3Q9UPQ7 KCNMB3P1-202ENST00000493696 3389 ntBASIC8.7□□□□□ -1.02
PDZRN3Q9UPQ7 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
PDZRN3Q9UPQ7 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
PDZRN3Q9UPQ7 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
PDZRN3Q9UPQ7 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC8.7□□□□□ -1.02
PDZRN3Q9UPQ7 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC8.7□□□□□ -1.02
PDZRN3Q9UPQ7 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC8.7□□□□□ -1.02
PDZRN3Q9UPQ7 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC8.7□□□□□ -1.02
PDZRN3Q9UPQ7 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC8.7□□□□□ -1.02
PDZRN3Q9UPQ7 CDY19P-201ENST00000411668 1613 ntBASIC8.7□□□□□ -1.02
PDZRN3Q9UPQ7 CDY18P-201ENST00000438294 1609 ntBASIC8.7□□□□□ -1.02
PDZRN3Q9UPQ7 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC8.7□□□□□ -1.02
PDZRN3Q9UPQ7 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
PDZRN3Q9UPQ7 AL391994.1-201ENST00000254724 282 ntBASIC8.7□□□□□ -1.02
PDZRN3Q9UPQ7 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
PDZRN3Q9UPQ7 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC8.7□□□□□ -1.02
PDZRN3Q9UPQ7 RNA5SP232-201ENST00000364144 119 ntBASIC8.7□□□□□ -1.02
PDZRN3Q9UPQ7 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
PDZRN3Q9UPQ7 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
PDZRN3Q9UPQ7 RN7SKP188-201ENST00000410789 317 ntBASIC8.7□□□□□ -1.02
PDZRN3Q9UPQ7 MTND3P17-201ENST00000416968 344 ntBASIC8.7□□□□□ -1.02
PDZRN3Q9UPQ7 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC8.7□□□□□ -1.02
PDZRN3Q9UPQ7 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC8.7□□□□□ -1.02
PDZRN3Q9UPQ7 GAPDHP20-201ENST00000444107 1007 ntBASIC8.7□□□□□ -1.02
PDZRN3Q9UPQ7 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC8.7□□□□□ -1.02
PDZRN3Q9UPQ7 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC8.7□□□□□ -1.02
PDZRN3Q9UPQ7 EIF4A1P6-201ENST00000448133 1210 ntBASIC8.7□□□□□ -1.02
PDZRN3Q9UPQ7 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC8.7□□□□□ -1.02
PDZRN3Q9UPQ7 SSXP1-201ENST00000453640 473 ntBASIC8.7□□□□□ -1.02
PDZRN3Q9UPQ7 RPS27AP2-201ENST00000457576 465 ntBASIC8.7□□□□□ -1.02
PDZRN3Q9UPQ7 RN7SL654P-201ENST00000479178 292 ntBASIC8.7□□□□□ -1.02
PDZRN3Q9UPQ7 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
PDZRN3Q9UPQ7 AF213884.1-201ENST00000488102 463 ntBASIC8.7□□□□□ -1.02
PDZRN3Q9UPQ7 OR9N1P-202ENST00000494289 481 ntBASIC8.7□□□□□ -1.02
PDZRN3Q9UPQ7 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC8.7□□□□□ -1.02
PDZRN3Q9UPQ7 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC8.7□□□□□ -1.02
PDZRN3Q9UPQ7 AC087752.2-201ENST00000521219 281 ntBASIC8.7□□□□□ -1.02
PDZRN3Q9UPQ7 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC8.7□□□□□ -1.02
PDZRN3Q9UPQ7 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC8.7□□□□□ -1.02
PDZRN3Q9UPQ7 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC8.7□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms