Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.57□□□□□ -1.36
SSU72Q9NP77 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC6.57□□□□□ -1.36
SSU72Q9NP77 DDX18P6-201ENST00000450119 1997 ntBASIC6.57□□□□□ -1.36
SSU72Q9NP77 CYP4Z2P-201ENST00000423332 1512 ntBASIC6.57□□□□□ -1.36
SSU72Q9NP77 HSP90AA2P-201ENST00000530115 2196 ntBASIC6.57□□□□□ -1.36
SSU72Q9NP77 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SSU72Q9NP77 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SSU72Q9NP77 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SSU72Q9NP77 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SSU72Q9NP77 OR9G4-201ENST00000302957 984 ntBASIC6.57□□□□□ -1.36
SSU72Q9NP77 RNA5SP114-201ENST00000363780 113 ntBASIC6.57□□□□□ -1.36
SSU72Q9NP77 SNORA4.1-201ENST00000364263 144 ntBASIC6.57□□□□□ -1.36
SSU72Q9NP77 RN7SKP226-201ENST00000364912 300 ntBASIC6.57□□□□□ -1.36
SSU72Q9NP77 Y_RNA.311-201ENST00000365068 96 ntBASIC6.57□□□□□ -1.36
SSU72Q9NP77 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SSU72Q9NP77 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC6.57□□□□□ -1.36
SSU72Q9NP77 AC007068.1-201ENST00000396690 844 ntBASIC6.57□□□□□ -1.36
SSU72Q9NP77 OR2W4P-201ENST00000406496 926 ntBASIC6.57□□□□□ -1.36
SSU72Q9NP77 AC002524.1-201ENST00000411687 547 ntBASIC6.57□□□□□ -1.36
SSU72Q9NP77 AC013404.1-201ENST00000413068 249 ntBASIC6.57□□□□□ -1.36
SSU72Q9NP77 AP001468.1-201ENST00000415026 557 ntTSL 4 BASIC6.57□□□□□ -1.36
SSU72Q9NP77 AL357632.1-201ENST00000426688 643 ntBASIC6.57□□□□□ -1.36
SSU72Q9NP77 MTCO1P54-201ENST00000430139 712 ntBASIC6.57□□□□□ -1.36
SSU72Q9NP77 TRIM60P3Y-201ENST00000432201 673 ntBASIC6.57□□□□□ -1.36
SSU72Q9NP77 USP12PX-201ENST00000432383 1057 ntBASIC6.57□□□□□ -1.36
SSU72Q9NP77 TMX2P1-201ENST00000436507 708 ntBASIC6.57□□□□□ -1.36
SSU72Q9NP77 AL512286.1-201ENST00000439244 400 ntBASIC6.57□□□□□ -1.36
SSU72Q9NP77 MTND4LP16-201ENST00000440828 295 ntBASIC6.57□□□□□ -1.36
SSU72Q9NP77 AC004865.1-201ENST00000442276 1003 ntBASIC6.57□□□□□ -1.36
SSU72Q9NP77 RAB11AP1-201ENST00000442978 646 ntBASIC6.57□□□□□ -1.36
SSU72Q9NP77 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC6.57□□□□□ -1.36
SSU72Q9NP77 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC6.57□□□□□ -1.36
SSU72Q9NP77 VNN3-210ENST00000450865 596 ntTSL 4 BASIC6.57□□□□□ -1.36
SSU72Q9NP77 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.57□□□□□ -1.36
SSU72Q9NP77 HSPE1P22-201ENST00000456856 327 ntBASIC6.57□□□□□ -1.36
SSU72Q9NP77 MTND1P16-201ENST00000465177 898 ntBASIC6.57□□□□□ -1.36
SSU72Q9NP77 RPSAP48-201ENST00000466509 889 ntBASIC6.57□□□□□ -1.36
SSU72Q9NP77 RPS26P6-201ENST00000475156 348 ntBASIC6.57□□□□□ -1.36
SSU72Q9NP77 RN7SL685P-201ENST00000476271 298 ntBASIC6.57□□□□□ -1.36
SSU72Q9NP77 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SSU72Q9NP77 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC6.57□□□□□ -1.36
SSU72Q9NP77 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC6.57□□□□□ -1.36
SSU72Q9NP77 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC6.57□□□□□ -1.36
SSU72Q9NP77 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC6.57□□□□□ -1.36
SSU72Q9NP77 AC096661.1-201ENST00000515870 822 ntBASIC6.57□□□□□ -1.36
SSU72Q9NP77 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC6.57□□□□□ -1.36
SSU72Q9NP77 OR5BC1P-201ENST00000529327 739 ntBASIC6.57□□□□□ -1.36
SSU72Q9NP77 DEFB108A-201ENST00000530110 222 ntBASIC6.57□□□□□ -1.36
SSU72Q9NP77 AC140063.1-201ENST00000541343 259 ntBASIC6.57□□□□□ -1.36
SSU72Q9NP77 AL121579.2-201ENST00000555466 590 ntBASIC6.57□□□□□ -1.36
SSU72Q9NP77 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC6.57□□□□□ -1.36
SSU72Q9NP77 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC6.57□□□□□ -1.36
SSU72Q9NP77 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC6.57□□□□□ -1.36
SSU72Q9NP77 AL049840.5-201ENST00000602827 552 ntBASIC6.57□□□□□ -1.36
SSU72Q9NP77 AP000907.4-201ENST00000604143 237 ntBASIC6.57□□□□□ -1.36
SSU72Q9NP77 AL590032.1-201ENST00000604920 252 ntBASIC6.57□□□□□ -1.36
SSU72Q9NP77 AC009994.1-201ENST00000606889 253 ntBASIC6.57□□□□□ -1.36
SSU72Q9NP77 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.57□□□□□ -1.36
SSU72Q9NP77 AC087893.2-201ENST00000623272 255 ntBASIC6.57□□□□□ -1.36
SSU72Q9NP77 AC099654.5-201ENST00000636479 350 ntBASIC6.57□□□□□ -1.36
SSU72Q9NP77 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC6.57□□□□□ -1.36
SSU72Q9NP77 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
SSU72Q9NP77 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SSU72Q9NP77 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SSU72Q9NP77 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
SSU72Q9NP77 EEF1A1P28-201ENST00000450915 1403 ntBASIC6.57□□□□□ -1.36
SSU72Q9NP77 PHACTR2P1-201ENST00000605639 1414 ntBASIC6.57□□□□□ -1.36
SSU72Q9NP77 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC6.57□□□□□ -1.36
SSU72Q9NP77 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SSU72Q9NP77 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SSU72Q9NP77 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC6.56□□□□□ -1.36
SSU72Q9NP77 RPS4XP5-202ENST00000449995 1334 ntBASIC6.56□□□□□ -1.36
SSU72Q9NP77 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SSU72Q9NP77 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
SSU72Q9NP77 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SSU72Q9NP77 YOD1-202ENST00000367084 6291 ntTSL 2 BASIC6.56□□□□□ -1.36
SSU72Q9NP77 S100Z-201ENST00000317593 1468 ntAPPRIS P1 TSL 3 BASIC6.56□□□□□ -1.36
SSU72Q9NP77 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
SSU72Q9NP77 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SSU72Q9NP77 AC008033.1-201ENST00000216407 1162 ntBASIC6.56□□□□□ -1.36
SSU72Q9NP77 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
SSU72Q9NP77 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
SSU72Q9NP77 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
SSU72Q9NP77 MIR614-201ENST00000385082 90 ntBASIC6.56□□□□□ -1.36
SSU72Q9NP77 CYCSP45-201ENST00000402289 315 ntBASIC6.56□□□□□ -1.36
SSU72Q9NP77 RN7SKP236-201ENST00000410635 284 ntBASIC6.56□□□□□ -1.36
SSU72Q9NP77 AL359475.1-201ENST00000414505 292 ntTSL 3 BASIC6.56□□□□□ -1.36
SSU72Q9NP77 AC138393.2-201ENST00000414742 246 ntBASIC6.56□□□□□ -1.36
SSU72Q9NP77 AC245054.1-201ENST00000420944 258 ntBASIC6.56□□□□□ -1.36
SSU72Q9NP77 AC092066.1-201ENST00000425131 317 ntBASIC6.56□□□□□ -1.36
SSU72Q9NP77 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.56□□□□□ -1.36
SSU72Q9NP77 AC134879.1-201ENST00000426062 394 ntBASIC6.56□□□□□ -1.36
SSU72Q9NP77 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
SSU72Q9NP77 ANXA2P2-201ENST00000435128 1020 ntBASIC6.56□□□□□ -1.36
SSU72Q9NP77 RANP1-206ENST00000455094 651 ntBASIC6.56□□□□□ -1.36
SSU72Q9NP77 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC6.56□□□□□ -1.36
SSU72Q9NP77 MTND6P6-201ENST00000478031 263 ntBASIC6.56□□□□□ -1.36
SSU72Q9NP77 AC109462.1-201ENST00000491087 368 ntBASIC6.56□□□□□ -1.36
SSU72Q9NP77 RPL9P6-201ENST00000492764 598 ntBASIC6.56□□□□□ -1.36
SSU72Q9NP77 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms