Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 MRPS16P1-201ENST00000523462 412 ntBASIC5.36□□□□□ -1.55
BRF2Q9HAW0 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.36□□□□□ -1.55
BRF2Q9HAW0 AP003102.1-201ENST00000525638 661 ntBASIC5.36□□□□□ -1.55
BRF2Q9HAW0 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.36□□□□□ -1.55
BRF2Q9HAW0 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.36□□□□□ -1.55
BRF2Q9HAW0 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.36□□□□□ -1.55
BRF2Q9HAW0 SULT1C2P2-201ENST00000562517 294 ntBASIC5.36□□□□□ -1.55
BRF2Q9HAW0 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.36□□□□□ -1.55
BRF2Q9HAW0 MIR7853-201ENST00000584820 132 ntBASIC5.36□□□□□ -1.55
BRF2Q9HAW0 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.36□□□□□ -1.55
BRF2Q9HAW0 AC108865.2-201ENST00000606881 432 ntBASIC5.36□□□□□ -1.55
BRF2Q9HAW0 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC5.36□□□□□ -1.55
BRF2Q9HAW0 AL445528.2-201ENST00000620582 470 ntBASIC5.36□□□□□ -1.55
BRF2Q9HAW0 AP003497.2-201ENST00000624220 967 ntBASIC5.36□□□□□ -1.55
BRF2Q9HAW0 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.36□□□□□ -1.55
BRF2Q9HAW0 AC129915.3-201ENST00000634128 948 ntBASIC5.36□□□□□ -1.55
BRF2Q9HAW0 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.36□□□□□ -1.55
BRF2Q9HAW0 AC079097.1-201ENST00000512187 1399 ntBASIC5.36□□□□□ -1.55
BRF2Q9HAW0 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
BRF2Q9HAW0 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.36□□□□□ -1.55
BRF2Q9HAW0 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.36□□□□□ -1.55
BRF2Q9HAW0 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
BRF2Q9HAW0 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.36□□□□□ -1.55
BRF2Q9HAW0 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
BRF2Q9HAW0 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.35□□□□□ -1.55
BRF2Q9HAW0 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
BRF2Q9HAW0 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
BRF2Q9HAW0 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.35□□□□□ -1.55
BRF2Q9HAW0 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
BRF2Q9HAW0 AC068870.1-201ENST00000563737 2455 ntBASIC5.35□□□□□ -1.55
BRF2Q9HAW0 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
BRF2Q9HAW0 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
BRF2Q9HAW0 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
BRF2Q9HAW0 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
BRF2Q9HAW0 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
BRF2Q9HAW0 RNU1-146P-201ENST00000364015 165 ntBASIC5.35□□□□□ -1.55
BRF2Q9HAW0 RNA5SP131-201ENST00000365452 119 ntBASIC5.35□□□□□ -1.55
BRF2Q9HAW0 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
BRF2Q9HAW0 RNU6-452P-201ENST00000384406 107 ntBASIC5.35□□□□□ -1.55
BRF2Q9HAW0 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
BRF2Q9HAW0 VN1R12P-201ENST00000403778 876 ntBASIC5.35□□□□□ -1.55
BRF2Q9HAW0 AC099535.1-201ENST00000408928 371 ntBASIC5.35□□□□□ -1.55
BRF2Q9HAW0 AC002524.1-201ENST00000411687 547 ntBASIC5.35□□□□□ -1.55
BRF2Q9HAW0 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.35□□□□□ -1.55
BRF2Q9HAW0 AL133482.1-201ENST00000415988 498 ntBASIC5.35□□□□□ -1.55
BRF2Q9HAW0 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
BRF2Q9HAW0 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC5.35□□□□□ -1.55
BRF2Q9HAW0 AL354766.1-201ENST00000423396 542 ntBASIC5.35□□□□□ -1.55
BRF2Q9HAW0 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
BRF2Q9HAW0 HSFY7P-201ENST00000432672 318 ntBASIC5.35□□□□□ -1.55
BRF2Q9HAW0 HSFY8P-201ENST00000437934 318 ntBASIC5.35□□□□□ -1.55
BRF2Q9HAW0 AC073465.2-201ENST00000440938 498 ntBASIC5.35□□□□□ -1.55
BRF2Q9HAW0 AC097499.1-201ENST00000444277 208 ntBASIC5.35□□□□□ -1.55
BRF2Q9HAW0 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC5.35□□□□□ -1.55
BRF2Q9HAW0 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.35□□□□□ -1.55
BRF2Q9HAW0 AL358876.1-201ENST00000453364 1075 ntBASIC5.35□□□□□ -1.55
BRF2Q9HAW0 HSFY5P-201ENST00000453726 309 ntBASIC5.35□□□□□ -1.55
BRF2Q9HAW0 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.35□□□□□ -1.55
BRF2Q9HAW0 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC5.35□□□□□ -1.55
BRF2Q9HAW0 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
BRF2Q9HAW0 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC5.35□□□□□ -1.55
BRF2Q9HAW0 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.35□□□□□ -1.55
BRF2Q9HAW0 RNU6-615P-201ENST00000516065 106 ntBASIC5.35□□□□□ -1.55
BRF2Q9HAW0 SEPT10P1-201ENST00000517342 1162 ntBASIC5.35□□□□□ -1.55
BRF2Q9HAW0 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.35□□□□□ -1.55
BRF2Q9HAW0 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC5.35□□□□□ -1.55
BRF2Q9HAW0 OR4A43P-201ENST00000532938 908 ntBASIC5.35□□□□□ -1.55
BRF2Q9HAW0 AC079600.1-201ENST00000550326 297 ntBASIC5.35□□□□□ -1.55
BRF2Q9HAW0 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.35□□□□□ -1.55
BRF2Q9HAW0 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC5.35□□□□□ -1.55
BRF2Q9HAW0 AC015802.2-201ENST00000589690 189 ntBASIC5.35□□□□□ -1.55
BRF2Q9HAW0 AC006116.7-201ENST00000590141 756 ntBASIC5.35□□□□□ -1.55
BRF2Q9HAW0 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.35□□□□□ -1.55
BRF2Q9HAW0 AC018618.2-201ENST00000604770 446 ntBASIC5.35□□□□□ -1.55
BRF2Q9HAW0 AC112503.2-201ENST00000609005 552 ntBASIC5.35□□□□□ -1.55
BRF2Q9HAW0 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC5.35□□□□□ -1.55
BRF2Q9HAW0 uc_338.7-201ENST00000621834 124 ntBASIC5.35□□□□□ -1.55
BRF2Q9HAW0 METTL8-219ENST00000640734 726 ntTSL 2 BASIC5.35□□□□□ -1.55
BRF2Q9HAW0 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.35□□□□□ -1.55
BRF2Q9HAW0 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
BRF2Q9HAW0 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.35□□□□□ -1.55
BRF2Q9HAW0 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
BRF2Q9HAW0 AC018809.2-201ENST00000602436 3823 ntBASIC5.35□□□□□ -1.55
BRF2Q9HAW0 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
BRF2Q9HAW0 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
BRF2Q9HAW0 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
BRF2Q9HAW0 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
BRF2Q9HAW0 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.34□□□□□ -1.55
BRF2Q9HAW0 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.34□□□□□ -1.55
BRF2Q9HAW0 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
BRF2Q9HAW0 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
BRF2Q9HAW0 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
BRF2Q9HAW0 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
BRF2Q9HAW0 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
BRF2Q9HAW0 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.34□□□□□ -1.55
BRF2Q9HAW0 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.34□□□□□ -1.55
BRF2Q9HAW0 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.34□□□□□ -1.55
BRF2Q9HAW0 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.34□□□□□ -1.55
BRF2Q9HAW0 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.34□□□□□ -1.55
BRF2Q9HAW0 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms