Protein–RNA interactions for Protein: Q8N4P3

HDDC3, Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3Q8N4P3 GAPDHP62-201ENST00000515313 990 ntBASIC5.45□□□□□ -1.54
HDDC3Q8N4P3 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.45□□□□□ -1.54
HDDC3Q8N4P3 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.45□□□□□ -1.54
HDDC3Q8N4P3 RPL10P14-201ENST00000565265 298 ntBASIC5.45□□□□□ -1.54
HDDC3Q8N4P3 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.45□□□□□ -1.54
HDDC3Q8N4P3 AC005341.1-201ENST00000571086 708 ntBASIC5.45□□□□□ -1.54
HDDC3Q8N4P3 MIR3934-201ENST00000579806 107 ntBASIC5.45□□□□□ -1.54
HDDC3Q8N4P3 MIR4480-201ENST00000582492 71 ntBASIC5.45□□□□□ -1.54
HDDC3Q8N4P3 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.45□□□□□ -1.54
HDDC3Q8N4P3 AP001357.1-201ENST00000586304 1053 ntBASIC5.45□□□□□ -1.54
HDDC3Q8N4P3 AC009303.3-201ENST00000591103 736 ntBASIC5.45□□□□□ -1.54
HDDC3Q8N4P3 GMCL1P2-201ENST00000605230 823 ntBASIC5.45□□□□□ -1.54
HDDC3Q8N4P3 AL353729.2-201ENST00000605859 1249 ntBASIC5.45□□□□□ -1.54
HDDC3Q8N4P3 AC012213.4-201ENST00000606457 354 ntBASIC5.45□□□□□ -1.54
HDDC3Q8N4P3 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.45□□□□□ -1.54
HDDC3Q8N4P3 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.45□□□□□ -1.54
HDDC3Q8N4P3 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.45□□□□□ -1.54
HDDC3Q8N4P3 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC5.45□□□□□ -1.54
HDDC3Q8N4P3 CYP4F35P-202ENST00000636121 390 ntBASIC5.45□□□□□ -1.54
HDDC3Q8N4P3 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.45□□□□□ -1.54
HDDC3Q8N4P3 AC000095.2-202ENST00000637415 154 ntBASIC5.45□□□□□ -1.54
HDDC3Q8N4P3 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
HDDC3Q8N4P3 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HDDC3Q8N4P3 AC133552.1-201ENST00000569988 4007 ntBASIC5.45□□□□□ -1.54
HDDC3Q8N4P3 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
HDDC3Q8N4P3 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.45□□□□□ -1.54
HDDC3Q8N4P3 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.45□□□□□ -1.54
HDDC3Q8N4P3 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HDDC3Q8N4P3 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
HDDC3Q8N4P3 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.44□□□□□ -1.54
HDDC3Q8N4P3 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
HDDC3Q8N4P3 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HDDC3Q8N4P3 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HDDC3Q8N4P3 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.44□□□□□ -1.54
HDDC3Q8N4P3 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
HDDC3Q8N4P3 AL022311.1-201ENST00000623726 19416 ntBASIC5.44□□□□□ -1.54
HDDC3Q8N4P3 U3.2-201ENST00000362981 210 ntBASIC5.44□□□□□ -1.54
HDDC3Q8N4P3 U3.23-201ENST00000391132 200 ntBASIC5.44□□□□□ -1.54
HDDC3Q8N4P3 RPL5P19-201ENST00000404228 893 ntBASIC5.44□□□□□ -1.54
HDDC3Q8N4P3 OR4K12P-201ENST00000406538 961 ntBASIC5.44□□□□□ -1.54
HDDC3Q8N4P3 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.44□□□□□ -1.54
HDDC3Q8N4P3 TRIM60P17-201ENST00000415181 719 ntBASIC5.44□□□□□ -1.54
HDDC3Q8N4P3 AL807761.1-201ENST00000417622 171 ntBASIC5.44□□□□□ -1.54
HDDC3Q8N4P3 MRPS21P2-201ENST00000424704 264 ntBASIC5.44□□□□□ -1.54
HDDC3Q8N4P3 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.44□□□□□ -1.54
HDDC3Q8N4P3 PSMD10P3-201ENST00000437000 448 ntBASIC5.44□□□□□ -1.54
HDDC3Q8N4P3 PA2G4P6-201ENST00000438325 1197 ntBASIC5.44□□□□□ -1.54
HDDC3Q8N4P3 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HDDC3Q8N4P3 AC092647.3-201ENST00000443044 633 ntBASIC5.44□□□□□ -1.54
HDDC3Q8N4P3 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC5.44□□□□□ -1.54
HDDC3Q8N4P3 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC5.44□□□□□ -1.54
HDDC3Q8N4P3 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.44□□□□□ -1.54
HDDC3Q8N4P3 OR51K1P-201ENST00000510214 950 ntBASIC5.44□□□□□ -1.54
HDDC3Q8N4P3 AC109464.1-201ENST00000511091 819 ntBASIC5.44□□□□□ -1.54
HDDC3Q8N4P3 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HDDC3Q8N4P3 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.44□□□□□ -1.54
HDDC3Q8N4P3 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.44□□□□□ -1.54
HDDC3Q8N4P3 AP004607.2-201ENST00000533949 322 ntBASIC5.44□□□□□ -1.54
HDDC3Q8N4P3 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.44□□□□□ -1.54
HDDC3Q8N4P3 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.44□□□□□ -1.54
HDDC3Q8N4P3 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC5.44□□□□□ -1.54
HDDC3Q8N4P3 AC069307.1-201ENST00000602820 447 ntBASIC5.44□□□□□ -1.54
HDDC3Q8N4P3 AC012557.1-201ENST00000607115 611 ntBASIC5.44□□□□□ -1.54
HDDC3Q8N4P3 AL122125.1-201ENST00000616999 600 ntBASIC5.44□□□□□ -1.54
HDDC3Q8N4P3 AL731566.2-201ENST00000618971 317 ntBASIC5.44□□□□□ -1.54
HDDC3Q8N4P3 AC093775.1-201ENST00000624154 1868 ntBASIC5.44□□□□□ -1.54
HDDC3Q8N4P3 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HDDC3Q8N4P3 CASC19-281ENST00000642118 1554 ntBASIC5.44□□□□□ -1.54
HDDC3Q8N4P3 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
HDDC3Q8N4P3 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HDDC3Q8N4P3 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HDDC3Q8N4P3 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
HDDC3Q8N4P3 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HDDC3Q8N4P3 AL355488.2-201ENST00000609909 2850 ntBASIC5.44□□□□□ -1.54
HDDC3Q8N4P3 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.44□□□□□ -1.54
HDDC3Q8N4P3 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.44□□□□□ -1.54
HDDC3Q8N4P3 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
HDDC3Q8N4P3 CASC19-260ENST00000641828 2001 ntBASIC5.43□□□□□ -1.54
HDDC3Q8N4P3 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.43□□□□□ -1.54
HDDC3Q8N4P3 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.43□□□□□ -1.54
HDDC3Q8N4P3 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HDDC3Q8N4P3 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
HDDC3Q8N4P3 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HDDC3Q8N4P3 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.43□□□□□ -1.54
HDDC3Q8N4P3 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.43□□□□□ -1.54
HDDC3Q8N4P3 U3.36-201ENST00000408418 213 ntBASIC5.43□□□□□ -1.54
HDDC3Q8N4P3 RNA5SP487-201ENST00000410186 122 ntBASIC5.43□□□□□ -1.54
HDDC3Q8N4P3 AC016397.1-201ENST00000412463 242 ntBASIC5.43□□□□□ -1.54
HDDC3Q8N4P3 RPS26P13-201ENST00000419030 330 ntBASIC5.43□□□□□ -1.54
HDDC3Q8N4P3 AC093655.2-201ENST00000425735 631 ntBASIC5.43□□□□□ -1.54
HDDC3Q8N4P3 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HDDC3Q8N4P3 RPL12P17-201ENST00000432393 498 ntBASIC5.43□□□□□ -1.54
HDDC3Q8N4P3 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.43□□□□□ -1.54
HDDC3Q8N4P3 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.43□□□□□ -1.54
HDDC3Q8N4P3 CEACAMP9-201ENST00000442990 513 ntBASIC5.43□□□□□ -1.54
HDDC3Q8N4P3 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.43□□□□□ -1.54
HDDC3Q8N4P3 TPT1P13-201ENST00000449760 499 ntBASIC5.43□□□□□ -1.54
HDDC3Q8N4P3 AZGP1P2-201ENST00000454506 345 ntBASIC5.43□□□□□ -1.54
HDDC3Q8N4P3 AL133244.1-201ENST00000456007 258 ntBASIC5.43□□□□□ -1.54
HDDC3Q8N4P3 SNORD125-201ENST00000459538 96 ntBASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms