Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 RPS29P22-201ENST00000472363 168 ntBASIC6.16□□□□□ -1.42
RFX7Q2KHR2 DEFB109A-201ENST00000482450 265 ntBASIC6.16□□□□□ -1.42
RFX7Q2KHR2 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC6.16□□□□□ -1.42
RFX7Q2KHR2 AC138832.1-201ENST00000522871 556 ntBASIC6.16□□□□□ -1.42
RFX7Q2KHR2 AC021006.3-201ENST00000530771 192 ntBASIC6.16□□□□□ -1.42
RFX7Q2KHR2 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC6.16□□□□□ -1.42
RFX7Q2KHR2 AC008033.2-201ENST00000542626 177 ntBASIC6.16□□□□□ -1.42
RFX7Q2KHR2 NELL2-211ENST00000548826 559 ntTSL 2 BASIC6.16□□□□□ -1.42
RFX7Q2KHR2 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC6.16□□□□□ -1.42
RFX7Q2KHR2 NOP10-202ENST00000557912 436 ntTSL 2 BASIC6.16□□□□□ -1.42
RFX7Q2KHR2 AC116553.2-201ENST00000564203 463 ntBASIC6.16□□□□□ -1.42
RFX7Q2KHR2 AC019322.1-201ENST00000571869 389 ntBASIC6.16□□□□□ -1.42
RFX7Q2KHR2 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC6.16□□□□□ -1.42
RFX7Q2KHR2 ELOCP28-201ENST00000590044 317 ntBASIC6.16□□□□□ -1.42
RFX7Q2KHR2 uc_338.18-201ENST00000615451 175 ntBASIC6.16□□□□□ -1.42
RFX7Q2KHR2 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.16□□□□□ -1.42
RFX7Q2KHR2 MIR7703-201ENST00000620784 77 ntBASIC6.16□□□□□ -1.42
RFX7Q2KHR2 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
RFX7Q2KHR2 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
RFX7Q2KHR2 BMPR1APS1-201ENST00000403332 1598 ntBASIC6.16□□□□□ -1.42
RFX7Q2KHR2 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC6.15□□□□□ -1.42
RFX7Q2KHR2 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
RFX7Q2KHR2 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
RFX7Q2KHR2 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
RFX7Q2KHR2 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC6.15□□□□□ -1.42
RFX7Q2KHR2 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
RFX7Q2KHR2 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC6.15□□□□□ -1.43
RFX7Q2KHR2 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
RFX7Q2KHR2 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
RFX7Q2KHR2 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC6.15□□□□□ -1.43
RFX7Q2KHR2 ATP5HP3-201ENST00000396994 486 ntBASIC6.15□□□□□ -1.43
RFX7Q2KHR2 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC6.15□□□□□ -1.43
RFX7Q2KHR2 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
RFX7Q2KHR2 AC093414.1-201ENST00000434712 514 ntBASIC6.15□□□□□ -1.43
RFX7Q2KHR2 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
RFX7Q2KHR2 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
RFX7Q2KHR2 AC091180.1-201ENST00000462104 372 ntBASIC6.15□□□□□ -1.43
RFX7Q2KHR2 AC090602.1-201ENST00000469695 252 ntBASIC6.15□□□□□ -1.43
RFX7Q2KHR2 HMGN2P25-201ENST00000486956 268 ntBASIC6.15□□□□□ -1.43
RFX7Q2KHR2 AC007686.1-201ENST00000488511 463 ntBASIC6.15□□□□□ -1.43
RFX7Q2KHR2 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC6.15□□□□□ -1.43
RFX7Q2KHR2 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
RFX7Q2KHR2 PCNPP1-201ENST00000552501 511 ntBASIC6.15□□□□□ -1.43
RFX7Q2KHR2 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC6.15□□□□□ -1.43
RFX7Q2KHR2 AC127024.5-201ENST00000580085 462 ntBASIC6.15□□□□□ -1.43
RFX7Q2KHR2 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC6.15□□□□□ -1.43
RFX7Q2KHR2 AP000473.2-201ENST00000602659 1537 ntBASIC6.15□□□□□ -1.43
RFX7Q2KHR2 FRG1EP-201ENST00000634469 770 ntBASIC6.15□□□□□ -1.43
RFX7Q2KHR2 AP000550.3-201ENST00000637734 379 ntBASIC6.15□□□□□ -1.43
RFX7Q2KHR2 AC073869.10-201ENST00000642016 354 ntBASIC6.15□□□□□ -1.43
RFX7Q2KHR2 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
RFX7Q2KHR2 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC6.14□□□□□ -1.43
RFX7Q2KHR2 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
RFX7Q2KHR2 LCMT1-AS2-202ENST00000565214 5666 ntBASIC6.14□□□□□ -1.43
RFX7Q2KHR2 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
RFX7Q2KHR2 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
RFX7Q2KHR2 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
RFX7Q2KHR2 AC083837.1-201ENST00000565297 2994 ntBASIC6.14□□□□□ -1.43
RFX7Q2KHR2 RN7SKP149-201ENST00000363008 344 ntBASIC6.14□□□□□ -1.43
RFX7Q2KHR2 RNA5SP455-201ENST00000365190 119 ntBASIC6.14□□□□□ -1.43
RFX7Q2KHR2 RPL7P11-201ENST00000437586 658 ntBASIC6.14□□□□□ -1.43
RFX7Q2KHR2 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC6.14□□□□□ -1.43
RFX7Q2KHR2 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC6.14□□□□□ -1.43
RFX7Q2KHR2 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
RFX7Q2KHR2 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC6.14□□□□□ -1.43
RFX7Q2KHR2 RN7SL443P-201ENST00000464331 290 ntBASIC6.14□□□□□ -1.43
RFX7Q2KHR2 RPL7P16-201ENST00000479738 738 ntBASIC6.14□□□□□ -1.43
RFX7Q2KHR2 COX6B1P5-201ENST00000509843 249 ntBASIC6.14□□□□□ -1.43
RFX7Q2KHR2 BTF3P13-201ENST00000513224 490 ntBASIC6.14□□□□□ -1.43
RFX7Q2KHR2 RN7SKP260-201ENST00000516907 149 ntBASIC6.14□□□□□ -1.43
RFX7Q2KHR2 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC6.14□□□□□ -1.43
RFX7Q2KHR2 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC6.14□□□□□ -1.43
RFX7Q2KHR2 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
RFX7Q2KHR2 AC005084.1-201ENST00000605160 304 ntBASIC6.14□□□□□ -1.43
RFX7Q2KHR2 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC6.14□□□□□ -1.43
RFX7Q2KHR2 AC009120.7-201ENST00000623452 780 ntBASIC6.14□□□□□ -1.43
RFX7Q2KHR2 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
RFX7Q2KHR2 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
RFX7Q2KHR2 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
RFX7Q2KHR2 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
RFX7Q2KHR2 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RFX7Q2KHR2 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RFX7Q2KHR2 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RFX7Q2KHR2 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC6.13□□□□□ -1.43
RFX7Q2KHR2 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RFX7Q2KHR2 ADAM5-202ENST00000399789 1942 ntBASIC6.13□□□□□ -1.43
RFX7Q2KHR2 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC6.13□□□□□ -1.43
RFX7Q2KHR2 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RFX7Q2KHR2 RPL26P29-201ENST00000415623 438 ntBASIC6.13□□□□□ -1.43
RFX7Q2KHR2 CHEK2P3-201ENST00000416118 248 ntBASIC6.13□□□□□ -1.43
RFX7Q2KHR2 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC6.13□□□□□ -1.43
RFX7Q2KHR2 TEX41-205ENST00000431734 529 ntTSL 4 BASIC6.13□□□□□ -1.43
RFX7Q2KHR2 AL590399.4-201ENST00000436561 601 ntBASIC6.13□□□□□ -1.43
RFX7Q2KHR2 OR7E125P-201ENST00000443450 846 ntBASIC6.13□□□□□ -1.43
RFX7Q2KHR2 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC6.13□□□□□ -1.43
RFX7Q2KHR2 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RFX7Q2KHR2 AC090142.2-201ENST00000483263 416 ntBASIC6.13□□□□□ -1.43
RFX7Q2KHR2 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RFX7Q2KHR2 AL671862.1-201ENST00000515851 349 ntBASIC6.13□□□□□ -1.43
RFX7Q2KHR2 OR7E128P-201ENST00000532736 1024 ntBASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 148.8 ms