Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC5.53□□□□□ -1.52
CLRN1P58418 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC5.53□□□□□ -1.52
CLRN1P58418 AC068790.7-201ENST00000602347 528 ntBASIC5.53□□□□□ -1.52
CLRN1P58418 AC068790.6-201ENST00000602558 258 ntBASIC5.53□□□□□ -1.52
CLRN1P58418 AC064872.1-201ENST00000604823 1072 ntBASIC5.53□□□□□ -1.52
CLRN1P58418 AP000238.1-201ENST00000608759 426 ntBASIC5.53□□□□□ -1.52
CLRN1P58418 STMN1P1-201ENST00000617809 440 ntBASIC5.53□□□□□ -1.52
CLRN1P58418 AC024595.1-201ENST00000623088 387 ntBASIC5.53□□□□□ -1.52
CLRN1P58418 AL359757.1-201ENST00000623176 255 ntBASIC5.53□□□□□ -1.52
CLRN1P58418 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC5.53□□□□□ -1.52
CLRN1P58418 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.53□□□□□ -1.52
CLRN1P58418 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC5.53□□□□□ -1.52
CLRN1P58418 MFSD8-245ENST00000641743 948 ntBASIC5.53□□□□□ -1.52
CLRN1P58418 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CLRN1P58418 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
CLRN1P58418 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC5.53□□□□□ -1.52
CLRN1P58418 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.53□□□□□ -1.52
CLRN1P58418 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC5.53□□□□□ -1.52
CLRN1P58418 AL359091.1-201ENST00000449048 1734 ntBASIC5.53□□□□□ -1.52
CLRN1P58418 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CLRN1P58418 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CLRN1P58418 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CLRN1P58418 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
CLRN1P58418 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CLRN1P58418 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
CLRN1P58418 AP000526.1-201ENST00000603308 1388 ntBASIC5.53□□□□□ -1.52
CLRN1P58418 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CLRN1P58418 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
CLRN1P58418 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.52□□□□□ -1.53
CLRN1P58418 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.52□□□□□ -1.53
CLRN1P58418 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
CLRN1P58418 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
CLRN1P58418 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CLRN1P58418 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CLRN1P58418 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CLRN1P58418 CASC19-206ENST00000641028 1430 ntBASIC5.52□□□□□ -1.53
CLRN1P58418 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
CLRN1P58418 RNU1-49P-201ENST00000363468 159 ntBASIC5.52□□□□□ -1.53
CLRN1P58418 RNA5SP346-201ENST00000363541 121 ntBASIC5.52□□□□□ -1.53
CLRN1P58418 Y_RNA.194-201ENST00000363985 102 ntBASIC5.52□□□□□ -1.53
CLRN1P58418 RNU4-7P-201ENST00000364758 141 ntBASIC5.52□□□□□ -1.53
CLRN1P58418 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CLRN1P58418 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CLRN1P58418 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.52□□□□□ -1.53
CLRN1P58418 AL034417.1-201ENST00000399343 800 ntBASIC5.52□□□□□ -1.53
CLRN1P58418 AL133260.1-201ENST00000405720 405 ntBASIC5.52□□□□□ -1.53
CLRN1P58418 RNU6-757P-201ENST00000410334 100 ntBASIC5.52□□□□□ -1.53
CLRN1P58418 ALDH7A1P4-201ENST00000412255 178 ntBASIC5.52□□□□□ -1.53
CLRN1P58418 TCEA1P4-201ENST00000415066 844 ntBASIC5.52□□□□□ -1.53
CLRN1P58418 AC098592.1-201ENST00000419352 333 ntBASIC5.52□□□□□ -1.53
CLRN1P58418 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC5.52□□□□□ -1.53
CLRN1P58418 AC019178.2-201ENST00000423595 505 ntBASIC5.52□□□□□ -1.53
CLRN1P58418 RPL7AP14-201ENST00000424041 802 ntBASIC5.52□□□□□ -1.53
CLRN1P58418 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC5.52□□□□□ -1.53
CLRN1P58418 DPY19L1P2-201ENST00000426647 915 ntBASIC5.52□□□□□ -1.53
CLRN1P58418 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC5.52□□□□□ -1.53
CLRN1P58418 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
CLRN1P58418 AC064862.5-201ENST00000440618 334 ntBASIC5.52□□□□□ -1.53
CLRN1P58418 RPL12P49-201ENST00000441100 121 ntBASIC5.52□□□□□ -1.53
CLRN1P58418 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC5.52□□□□□ -1.53
CLRN1P58418 AL360221.1-201ENST00000445989 335 ntBASIC5.52□□□□□ -1.53
CLRN1P58418 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC5.52□□□□□ -1.53
CLRN1P58418 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC5.52□□□□□ -1.53
CLRN1P58418 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.52□□□□□ -1.53
CLRN1P58418 AL133351.3-201ENST00000454998 193 ntBASIC5.52□□□□□ -1.53
CLRN1P58418 AC112187.1-201ENST00000455837 479 ntBASIC5.52□□□□□ -1.53
CLRN1P58418 AC073594.1-201ENST00000462065 364 ntBASIC5.52□□□□□ -1.53
CLRN1P58418 AC104108.1-201ENST00000509930 412 ntBASIC5.52□□□□□ -1.53
CLRN1P58418 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CLRN1P58418 AC026782.2-201ENST00000510845 636 ntBASIC5.52□□□□□ -1.53
CLRN1P58418 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC5.52□□□□□ -1.53
CLRN1P58418 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC5.52□□□□□ -1.53
CLRN1P58418 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC5.52□□□□□ -1.53
CLRN1P58418 SNORA74.1-201ENST00000516320 180 ntBASIC5.52□□□□□ -1.53
CLRN1P58418 Y_RNA.710-201ENST00000516975 110 ntBASIC5.52□□□□□ -1.53
CLRN1P58418 RPL12P22-201ENST00000519073 490 ntBASIC5.52□□□□□ -1.53
CLRN1P58418 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CLRN1P58418 MTCYBP20-201ENST00000524239 1129 ntBASIC5.52□□□□□ -1.53
CLRN1P58418 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC5.52□□□□□ -1.53
CLRN1P58418 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC5.52□□□□□ -1.53
CLRN1P58418 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CLRN1P58418 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.52□□□□□ -1.53
CLRN1P58418 RFPL1S-203ENST00000539579 330 ntBASIC5.52□□□□□ -1.53
CLRN1P58418 YWHABP2-201ENST00000540201 713 ntBASIC5.52□□□□□ -1.53
CLRN1P58418 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC5.52□□□□□ -1.53
CLRN1P58418 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC5.52□□□□□ -1.53
CLRN1P58418 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.52□□□□□ -1.53
CLRN1P58418 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC5.52□□□□□ -1.53
CLRN1P58418 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC5.52□□□□□ -1.53
CLRN1P58418 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC5.52□□□□□ -1.53
CLRN1P58418 AC007599.1-201ENST00000568688 1174 ntBASIC5.52□□□□□ -1.53
CLRN1P58418 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC5.52□□□□□ -1.53
CLRN1P58418 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.52□□□□□ -1.53
CLRN1P58418 SNORD39.2-201ENST00000579995 76 ntBASIC5.52□□□□□ -1.53
CLRN1P58418 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC5.52□□□□□ -1.53
CLRN1P58418 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC5.52□□□□□ -1.53
CLRN1P58418 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC5.52□□□□□ -1.53
CLRN1P58418 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC5.52□□□□□ -1.53
CLRN1P58418 AC125494.3-201ENST00000602759 455 ntBASIC5.52□□□□□ -1.53
CLRN1P58418 AP001981.2-201ENST00000603241 418 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 178.5 ms