Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SSX4O60224 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC5.06□□□□□ -1.6
SSX4O60224 AC090022.1-201ENST00000546569 311 ntBASIC5.06□□□□□ -1.6
SSX4O60224 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC5.06□□□□□ -1.6
SSX4O60224 AC006530.1-201ENST00000555980 571 ntBASIC5.06□□□□□ -1.6
SSX4O60224 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.06□□□□□ -1.6
SSX4O60224 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.06□□□□□ -1.6
SSX4O60224 BNIP3P19-201ENST00000605397 577 ntBASIC5.06□□□□□ -1.6
SSX4O60224 RNA5SP440-201ENST00000612665 119 ntBASIC5.06□□□□□ -1.6
SSX4O60224 AC006213.4-201ENST00000616184 634 ntBASIC5.06□□□□□ -1.6
SSX4O60224 AC015660.5-201ENST00000623238 564 ntBASIC5.06□□□□□ -1.6
SSX4O60224 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
SSX4O60224 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SSX4O60224 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.06□□□□□ -1.6
SSX4O60224 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
SSX4O60224 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
SSX4O60224 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.06□□□□□ -1.6
SSX4O60224 AL359715.4-201ENST00000606629 1436 ntBASIC5.06□□□□□ -1.6
SSX4O60224 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.06□□□□□ -1.6
SSX4O60224 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SSX4O60224 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SSX4O60224 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SSX4O60224 PDZK1P1-202ENST00000425209 1350 ntBASIC5.05□□□□□ -1.6
SSX4O60224 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SSX4O60224 AC083899.1-201ENST00000454465 3819 ntBASIC5.05□□□□□ -1.6
SSX4O60224 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SSX4O60224 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
SSX4O60224 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SSX4O60224 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
SSX4O60224 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.05□□□□□ -1.6
SSX4O60224 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.05□□□□□ -1.6
SSX4O60224 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
SSX4O60224 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
SSX4O60224 RPL11P3-201ENST00000395256 523 ntBASIC5.05□□□□□ -1.6
SSX4O60224 RN7SKP293-201ENST00000411389 296 ntBASIC5.05□□□□□ -1.6
SSX4O60224 MYL6P5-201ENST00000412707 459 ntBASIC5.05□□□□□ -1.6
SSX4O60224 NDUFA5P10-201ENST00000432147 357 ntBASIC5.05□□□□□ -1.6
SSX4O60224 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.05□□□□□ -1.6
SSX4O60224 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.05□□□□□ -1.6
SSX4O60224 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC5.05□□□□□ -1.6
SSX4O60224 AP000281.1-201ENST00000444036 316 ntBASIC5.05□□□□□ -1.6
SSX4O60224 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC5.05□□□□□ -1.6
SSX4O60224 RPS27AP2-201ENST00000457576 465 ntBASIC5.05□□□□□ -1.6
SSX4O60224 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC5.05□□□□□ -1.6
SSX4O60224 AC008629.2-201ENST00000503783 483 ntBASIC5.05□□□□□ -1.6
SSX4O60224 MGST2-204ENST00000506797 634 ntTSL 2 BASIC5.05□□□□□ -1.6
SSX4O60224 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.05□□□□□ -1.6
SSX4O60224 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.05□□□□□ -1.6
SSX4O60224 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
SSX4O60224 RNA5SP362-201ENST00000516048 118 ntBASIC5.05□□□□□ -1.6
SSX4O60224 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC5.05□□□□□ -1.6
SSX4O60224 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.05□□□□□ -1.6
SSX4O60224 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC5.05□□□□□ -1.6
SSX4O60224 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SSX4O60224 AP000859.1-201ENST00000525536 307 ntBASIC5.05□□□□□ -1.6
SSX4O60224 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.05□□□□□ -1.6
SSX4O60224 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.05□□□□□ -1.6
SSX4O60224 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.05□□□□□ -1.6
SSX4O60224 AC051619.2-201ENST00000559063 397 ntBASIC5.05□□□□□ -1.6
SSX4O60224 AL356801.1-201ENST00000559320 294 ntBASIC5.05□□□□□ -1.6
SSX4O60224 AC023158.1-201ENST00000561632 1025 ntBASIC5.05□□□□□ -1.6
SSX4O60224 AC106785.3-201ENST00000564064 847 ntBASIC5.05□□□□□ -1.6
SSX4O60224 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.05□□□□□ -1.6
SSX4O60224 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
SSX4O60224 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC5.05□□□□□ -1.6
SSX4O60224 AC119403.2-201ENST00000590960 598 ntBASIC5.05□□□□□ -1.6
SSX4O60224 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.05□□□□□ -1.6
SSX4O60224 AC084373.1-201ENST00000603311 235 ntBASIC5.05□□□□□ -1.6
SSX4O60224 AC013244.1-201ENST00000604279 193 ntBASIC5.05□□□□□ -1.6
SSX4O60224 HIRAP1-201ENST00000605318 787 ntBASIC5.05□□□□□ -1.6
SSX4O60224 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.05□□□□□ -1.6
SSX4O60224 AL135786.2-201ENST00000608422 615 ntBASIC5.05□□□□□ -1.6
SSX4O60224 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.05□□□□□ -1.6
SSX4O60224 AC245389.2-201ENST00000616023 576 ntBASIC5.05□□□□□ -1.6
SSX4O60224 AC242843.1-201ENST00000618702 573 ntBASIC5.05□□□□□ -1.6
SSX4O60224 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SSX4O60224 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
SSX4O60224 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
SSX4O60224 SPATA2P1-201ENST00000431223 2055 ntBASIC5.04□□□□□ -1.6
SSX4O60224 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.04□□□□□ -1.6
SSX4O60224 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
SSX4O60224 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SSX4O60224 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.04□□□□□ -1.6
SSX4O60224 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.04□□□□□ -1.6
SSX4O60224 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SSX4O60224 AL731532.2-201ENST00000623542 1953 ntBASIC5.04□□□□□ -1.6
SSX4O60224 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.04□□□□□ -1.6
SSX4O60224 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
SSX4O60224 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SSX4O60224 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SSX4O60224 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
SSX4O60224 SELENOWP1-201ENST00000322792 252 ntBASIC5.04□□□□□ -1.6
SSX4O60224 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.04□□□□□ -1.6
SSX4O60224 OR7E101P-201ENST00000400428 513 ntBASIC5.04□□□□□ -1.6
SSX4O60224 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
SSX4O60224 RNU2-22P-201ENST00000411266 212 ntBASIC5.04□□□□□ -1.6
SSX4O60224 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC5.04□□□□□ -1.6
SSX4O60224 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.04□□□□□ -1.6
SSX4O60224 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.04□□□□□ -1.6
SSX4O60224 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms