Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 AC015864.1-201ENST00000496512 544 ntBASIC5.61□□□□□ -1.51
O00370 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC5.61□□□□□ -1.51
O00370 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.61□□□□□ -1.51
O00370 CCNHP1-201ENST00000513311 678 ntBASIC5.61□□□□□ -1.51
O00370 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5.61□□□□□ -1.51
O00370 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.61□□□□□ -1.51
O00370 AC025574.1-201ENST00000554784 1653 ntBASIC5.61□□□□□ -1.51
O00370 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.61□□□□□ -1.51
O00370 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.61□□□□□ -1.51
O00370 AP000894.4-201ENST00000610185 483 ntBASIC5.61□□□□□ -1.51
O00370 AC090527.3-201ENST00000619041 548 ntBASIC5.61□□□□□ -1.51
O00370 AL158062.1-201ENST00000619632 745 ntBASIC5.61□□□□□ -1.51
O00370 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
O00370 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.61□□□□□ -1.51
O00370 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
O00370 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
O00370 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
O00370 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
O00370 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
O00370 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
O00370 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
O00370 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
O00370 MTCO1P15-201ENST00000529569 1526 ntBASIC5.6□□□□□ -1.51
O00370 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
O00370 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.6□□□□□ -1.51
O00370 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
O00370 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.6□□□□□ -1.51
O00370 TRIM51GP-201ENST00000534741 1350 ntBASIC5.6□□□□□ -1.51
O00370 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
O00370 AC005294.1-201ENST00000355509 281 ntBASIC5.6□□□□□ -1.51
O00370 RN7SKP74-201ENST00000362849 309 ntBASIC5.6□□□□□ -1.51
O00370 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
O00370 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
O00370 RN7SKP229-201ENST00000410465 302 ntBASIC5.6□□□□□ -1.51
O00370 AC211486.3-201ENST00000412694 621 ntBASIC5.6□□□□□ -1.51
O00370 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.6□□□□□ -1.51
O00370 MTATP6P19-201ENST00000413797 659 ntBASIC5.6□□□□□ -1.51
O00370 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.6□□□□□ -1.51
O00370 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.6□□□□□ -1.51
O00370 AC096644.3-201ENST00000416788 338 ntBASIC5.6□□□□□ -1.51
O00370 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
O00370 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.6□□□□□ -1.51
O00370 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.6□□□□□ -1.51
O00370 RAB9AP5-201ENST00000437794 597 ntBASIC5.6□□□□□ -1.51
O00370 RAB9AP2-201ENST00000443911 597 ntBASIC5.6□□□□□ -1.51
O00370 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.6□□□□□ -1.51
O00370 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
O00370 RPL7P40-201ENST00000481703 745 ntBASIC5.6□□□□□ -1.51
O00370 RPL7P41-201ENST00000485823 957 ntBASIC5.6□□□□□ -1.51
O00370 MYL12BP2-201ENST00000503948 512 ntBASIC5.6□□□□□ -1.51
O00370 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC5.6□□□□□ -1.51
O00370 AC027369.5-201ENST00000533838 755 ntBASIC5.6□□□□□ -1.51
O00370 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.6□□□□□ -1.51
O00370 DUX4L52-201ENST00000549363 777 ntBASIC5.6□□□□□ -1.51
O00370 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC5.6□□□□□ -1.51
O00370 AC127381.1-201ENST00000555979 939 ntBASIC5.6□□□□□ -1.51
O00370 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.6□□□□□ -1.51
O00370 MIR3936-201ENST00000584304 110 ntBASIC5.6□□□□□ -1.51
O00370 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
O00370 AC008814.1-201ENST00000603797 406 ntBASIC5.6□□□□□ -1.51
O00370 AC074140.1-201ENST00000621617 208 ntBASIC5.6□□□□□ -1.51
O00370 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
O00370 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
O00370 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.6□□□□□ -1.51
O00370 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
O00370 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
O00370 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
O00370 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
O00370 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.6□□□□□ -1.51
O00370 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
O00370 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
O00370 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
O00370 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
O00370 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
O00370 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
O00370 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
O00370 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.59□□□□□ -1.51
O00370 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
O00370 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
O00370 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.59□□□□□ -1.51
O00370 AC026523.2-201ENST00000625039 7739 ntBASIC5.59□□□□□ -1.51
O00370 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
O00370 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
O00370 AC235565.1-201ENST00000456962 1325 ntBASIC5.59□□□□□ -1.51
O00370 AC022417.1-201ENST00000624768 1303 ntBASIC5.59□□□□□ -1.51
O00370 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
O00370 MIR589-201ENST00000385238 99 ntBASIC5.59□□□□□ -1.51
O00370 MIR1286-201ENST00000408112 78 ntBASIC5.59□□□□□ -1.51
O00370 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.59□□□□□ -1.51
O00370 RPL12P9-201ENST00000412942 488 ntBASIC5.59□□□□□ -1.51
O00370 SEPT7P8-201ENST00000413308 775 ntBASIC5.59□□□□□ -1.51
O00370 SLC35E1P1-201ENST00000419313 864 ntBASIC5.59□□□□□ -1.51
O00370 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
O00370 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC5.59□□□□□ -1.51
O00370 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
O00370 OR52B5P-201ENST00000435337 951 ntBASIC5.59□□□□□ -1.51
O00370 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.59□□□□□ -1.51
O00370 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.59□□□□□ -1.51
O00370 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.59□□□□□ -1.51
O00370 DNAJB5P1-201ENST00000454004 806 ntBASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms