Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
NEDD8-MDP1E9PL57 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
NEDD8-MDP1E9PL57 RFESDP1-201ENST00000422350 461 ntBASIC5.33□□□□□ -1.56
NEDD8-MDP1E9PL57 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.33□□□□□ -1.56
NEDD8-MDP1E9PL57 BX119904.3-201ENST00000428194 957 ntBASIC5.33□□□□□ -1.56
NEDD8-MDP1E9PL57 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.33□□□□□ -1.56
NEDD8-MDP1E9PL57 AC090018.1-201ENST00000434369 367 ntBASIC5.33□□□□□ -1.56
NEDD8-MDP1E9PL57 AL161722.2-201ENST00000434731 981 ntBASIC5.33□□□□□ -1.56
NEDD8-MDP1E9PL57 RPL12P18-201ENST00000437175 325 ntBASIC5.33□□□□□ -1.56
NEDD8-MDP1E9PL57 AL157385.1-201ENST00000446973 268 ntBASIC5.33□□□□□ -1.56
NEDD8-MDP1E9PL57 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.33□□□□□ -1.56
NEDD8-MDP1E9PL57 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC5.33□□□□□ -1.56
NEDD8-MDP1E9PL57 RN7SL189P-201ENST00000468631 289 ntBASIC5.33□□□□□ -1.56
NEDD8-MDP1E9PL57 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.33□□□□□ -1.56
NEDD8-MDP1E9PL57 AP000797.2-201ENST00000475768 606 ntBASIC5.33□□□□□ -1.56
NEDD8-MDP1E9PL57 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC5.33□□□□□ -1.56
NEDD8-MDP1E9PL57 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.33□□□□□ -1.56
NEDD8-MDP1E9PL57 AC113398.2-201ENST00000507630 558 ntBASIC5.33□□□□□ -1.56
NEDD8-MDP1E9PL57 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC5.33□□□□□ -1.56
NEDD8-MDP1E9PL57 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC5.33□□□□□ -1.56
NEDD8-MDP1E9PL57 AC006427.1-201ENST00000514359 712 ntBASIC5.33□□□□□ -1.56
NEDD8-MDP1E9PL57 EIF4A2P5-201ENST00000529914 499 ntBASIC5.33□□□□□ -1.56
NEDD8-MDP1E9PL57 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.33□□□□□ -1.56
NEDD8-MDP1E9PL57 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.33□□□□□ -1.56
NEDD8-MDP1E9PL57 AC100827.5-201ENST00000615883 426 ntBASIC5.33□□□□□ -1.56
NEDD8-MDP1E9PL57 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
NEDD8-MDP1E9PL57 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
NEDD8-MDP1E9PL57 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NEDD8-MDP1E9PL57 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NEDD8-MDP1E9PL57 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
NEDD8-MDP1E9PL57 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NEDD8-MDP1E9PL57 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
NEDD8-MDP1E9PL57 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NEDD8-MDP1E9PL57 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC5.33□□□□□ -1.56
NEDD8-MDP1E9PL57 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
NEDD8-MDP1E9PL57 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
NEDD8-MDP1E9PL57 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.32□□□□□ -1.56
NEDD8-MDP1E9PL57 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
NEDD8-MDP1E9PL57 AC007342.9-201ENST00000623877 1385 ntBASIC5.32□□□□□ -1.56
NEDD8-MDP1E9PL57 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
NEDD8-MDP1E9PL57 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
NEDD8-MDP1E9PL57 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
NEDD8-MDP1E9PL57 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
NEDD8-MDP1E9PL57 AC109446.4-201ENST00000623235 2755 ntBASIC5.32□□□□□ -1.56
NEDD8-MDP1E9PL57 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
NEDD8-MDP1E9PL57 RN7SKP104-201ENST00000362605 328 ntBASIC5.32□□□□□ -1.56
NEDD8-MDP1E9PL57 RN7SKP153-201ENST00000365026 316 ntBASIC5.32□□□□□ -1.56
NEDD8-MDP1E9PL57 SNORA70.6-201ENST00000383934 134 ntBASIC5.32□□□□□ -1.56
NEDD8-MDP1E9PL57 DDX39BP1-205ENST00000422507 192 ntBASIC5.32□□□□□ -1.56
NEDD8-MDP1E9PL57 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.32□□□□□ -1.56
NEDD8-MDP1E9PL57 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.32□□□□□ -1.56
NEDD8-MDP1E9PL57 AC138761.5-201ENST00000433967 325 ntBASIC5.32□□□□□ -1.56
NEDD8-MDP1E9PL57 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.32□□□□□ -1.56
NEDD8-MDP1E9PL57 NDUFA5P8-201ENST00000449019 346 ntBASIC5.32□□□□□ -1.56
NEDD8-MDP1E9PL57 AC091685.2-201ENST00000454924 864 ntBASIC5.32□□□□□ -1.56
NEDD8-MDP1E9PL57 RPL7P41-201ENST00000485823 957 ntBASIC5.32□□□□□ -1.56
NEDD8-MDP1E9PL57 HMGN2P25-201ENST00000486956 268 ntBASIC5.32□□□□□ -1.56
NEDD8-MDP1E9PL57 COX6B1P2-201ENST00000489624 230 ntBASIC5.32□□□□□ -1.56
NEDD8-MDP1E9PL57 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
NEDD8-MDP1E9PL57 AC022360.1-201ENST00000521058 340 ntBASIC5.32□□□□□ -1.56
NEDD8-MDP1E9PL57 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.32□□□□□ -1.56
NEDD8-MDP1E9PL57 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.32□□□□□ -1.56
NEDD8-MDP1E9PL57 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC5.32□□□□□ -1.56
NEDD8-MDP1E9PL57 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
NEDD8-MDP1E9PL57 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.32□□□□□ -1.56
NEDD8-MDP1E9PL57 AC107993.1-201ENST00000591343 684 ntBASIC5.32□□□□□ -1.56
NEDD8-MDP1E9PL57 AL136295.6-201ENST00000610486 658 ntBASIC5.32□□□□□ -1.56
NEDD8-MDP1E9PL57 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5.32□□□□□ -1.56
NEDD8-MDP1E9PL57 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.32□□□□□ -1.56
NEDD8-MDP1E9PL57 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
NEDD8-MDP1E9PL57 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
NEDD8-MDP1E9PL57 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.32□□□□□ -1.56
NEDD8-MDP1E9PL57 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
NEDD8-MDP1E9PL57 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
NEDD8-MDP1E9PL57 NXF4-202ENST00000416098 1465 ntBASIC5.32□□□□□ -1.56
NEDD8-MDP1E9PL57 ADAM24P-201ENST00000398655 2101 ntBASIC5.32□□□□□ -1.56
NEDD8-MDP1E9PL57 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.32□□□□□ -1.56
NEDD8-MDP1E9PL57 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
NEDD8-MDP1E9PL57 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.31□□□□□ -1.56
NEDD8-MDP1E9PL57 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.31□□□□□ -1.56
NEDD8-MDP1E9PL57 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NEDD8-MDP1E9PL57 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
NEDD8-MDP1E9PL57 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
NEDD8-MDP1E9PL57 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.31□□□□□ -1.56
NEDD8-MDP1E9PL57 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
NEDD8-MDP1E9PL57 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
NEDD8-MDP1E9PL57 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC5.31□□□□□ -1.56
NEDD8-MDP1E9PL57 OR9G4-201ENST00000302957 984 ntBASIC5.31□□□□□ -1.56
NEDD8-MDP1E9PL57 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC5.31□□□□□ -1.56
NEDD8-MDP1E9PL57 SNORA51.8-201ENST00000384234 132 ntBASIC5.31□□□□□ -1.56
NEDD8-MDP1E9PL57 AC240504.1-201ENST00000395709 845 ntBASIC5.31□□□□□ -1.56
NEDD8-MDP1E9PL57 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
NEDD8-MDP1E9PL57 RN7SKP114-201ENST00000410327 279 ntBASIC5.31□□□□□ -1.56
NEDD8-MDP1E9PL57 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NEDD8-MDP1E9PL57 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NEDD8-MDP1E9PL57 AC099670.2-201ENST00000435130 321 ntBASIC5.31□□□□□ -1.56
NEDD8-MDP1E9PL57 SUMO2P1-206ENST00000445436 284 ntBASIC5.31□□□□□ -1.56
NEDD8-MDP1E9PL57 NOP56P2-201ENST00000447491 769 ntBASIC5.31□□□□□ -1.56
NEDD8-MDP1E9PL57 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.31□□□□□ -1.56
NEDD8-MDP1E9PL57 DEFB109A-201ENST00000482450 265 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms