Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
RHBDD3Q9Y3P4 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.65□□□□□ -1.67
RHBDD3Q9Y3P4 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
RHBDD3Q9Y3P4 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.65□□□□□ -1.67
RHBDD3Q9Y3P4 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.67
RHBDD3Q9Y3P4 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
RHBDD3Q9Y3P4 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
RHBDD3Q9Y3P4 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.65□□□□□ -1.67
RHBDD3Q9Y3P4 AL450326.2-201ENST00000421913 1962 ntBASIC4.65□□□□□ -1.67
RHBDD3Q9Y3P4 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.65□□□□□ -1.67
RHBDD3Q9Y3P4 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
RHBDD3Q9Y3P4 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.65□□□□□ -1.67
RHBDD3Q9Y3P4 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.65□□□□□ -1.67
RHBDD3Q9Y3P4 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
RHBDD3Q9Y3P4 AC093535.2-201ENST00000624769 2326 ntBASIC4.64□□□□□ -1.67
RHBDD3Q9Y3P4 SMG1P4-204ENST00000523028 4131 ntBASIC4.64□□□□□ -1.67
RHBDD3Q9Y3P4 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
RHBDD3Q9Y3P4 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
RHBDD3Q9Y3P4 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
RHBDD3Q9Y3P4 OR9G4-201ENST00000302957 984 ntBASIC4.64□□□□□ -1.67
RHBDD3Q9Y3P4 TMSB4XP4-201ENST00000323496 618 ntBASIC4.64□□□□□ -1.67
RHBDD3Q9Y3P4 OR9K1P-201ENST00000326513 941 ntBASIC4.64□□□□□ -1.67
RHBDD3Q9Y3P4 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
RHBDD3Q9Y3P4 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
RHBDD3Q9Y3P4 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC4.64□□□□□ -1.67
RHBDD3Q9Y3P4 AL136131.1-201ENST00000406079 803 ntBASIC4.64□□□□□ -1.67
RHBDD3Q9Y3P4 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.64□□□□□ -1.67
RHBDD3Q9Y3P4 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC4.64□□□□□ -1.67
RHBDD3Q9Y3P4 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.64□□□□□ -1.67
RHBDD3Q9Y3P4 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC4.64□□□□□ -1.67
RHBDD3Q9Y3P4 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC4.64□□□□□ -1.67
RHBDD3Q9Y3P4 SRSF1P1-201ENST00000424058 520 ntBASIC4.64□□□□□ -1.67
RHBDD3Q9Y3P4 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
RHBDD3Q9Y3P4 RPS29P14-201ENST00000431518 171 ntBASIC4.64□□□□□ -1.67
RHBDD3Q9Y3P4 GSTM5P1-201ENST00000434751 660 ntBASIC4.64□□□□□ -1.67
RHBDD3Q9Y3P4 AL390119.1-201ENST00000440329 312 ntBASIC4.64□□□□□ -1.67
RHBDD3Q9Y3P4 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC4.64□□□□□ -1.67
RHBDD3Q9Y3P4 NOP56P2-201ENST00000447491 769 ntBASIC4.64□□□□□ -1.67
RHBDD3Q9Y3P4 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC4.64□□□□□ -1.67
RHBDD3Q9Y3P4 CBX1P5-201ENST00000475330 559 ntBASIC4.64□□□□□ -1.67
RHBDD3Q9Y3P4 AC020779.1-201ENST00000478757 796 ntBASIC4.64□□□□□ -1.67
RHBDD3Q9Y3P4 RN7SL814P-201ENST00000487715 300 ntBASIC4.64□□□□□ -1.67
RHBDD3Q9Y3P4 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC4.64□□□□□ -1.67
RHBDD3Q9Y3P4 RPS24P16-201ENST00000497294 392 ntBASIC4.64□□□□□ -1.67
RHBDD3Q9Y3P4 MYL12BP2-201ENST00000503948 512 ntBASIC4.64□□□□□ -1.67
RHBDD3Q9Y3P4 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC4.64□□□□□ -1.67
RHBDD3Q9Y3P4 RNA5SP228-201ENST00000516232 133 ntBASIC4.64□□□□□ -1.67
RHBDD3Q9Y3P4 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC4.64□□□□□ -1.67
RHBDD3Q9Y3P4 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC4.64□□□□□ -1.67
RHBDD3Q9Y3P4 AC100784.1-201ENST00000522790 310 ntBASIC4.64□□□□□ -1.67
RHBDD3Q9Y3P4 AP004607.2-201ENST00000533949 322 ntBASIC4.64□□□□□ -1.67
RHBDD3Q9Y3P4 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC4.64□□□□□ -1.67
RHBDD3Q9Y3P4 AC090888.3-201ENST00000558917 509 ntBASIC4.64□□□□□ -1.67
RHBDD3Q9Y3P4 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC4.64□□□□□ -1.67
RHBDD3Q9Y3P4 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC4.64□□□□□ -1.67
RHBDD3Q9Y3P4 AC015720.2-201ENST00000567709 334 ntBASIC4.64□□□□□ -1.67
RHBDD3Q9Y3P4 MIR1273E-201ENST00000581165 102 ntBASIC4.64□□□□□ -1.67
RHBDD3Q9Y3P4 FAM106CP-201ENST00000582212 507 ntBASIC4.64□□□□□ -1.67
RHBDD3Q9Y3P4 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC4.64□□□□□ -1.67
RHBDD3Q9Y3P4 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.64□□□□□ -1.67
RHBDD3Q9Y3P4 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.64□□□□□ -1.67
RHBDD3Q9Y3P4 FAM72A-208ENST00000607379 1139 ntBASIC4.64□□□□□ -1.67
RHBDD3Q9Y3P4 MIR6861-201ENST00000618657 64 ntBASIC4.64□□□□□ -1.67
RHBDD3Q9Y3P4 MTCO1P1-201ENST00000624263 1081 ntBASIC4.64□□□□□ -1.67
RHBDD3Q9Y3P4 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
RHBDD3Q9Y3P4 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.64□□□□□ -1.67
RHBDD3Q9Y3P4 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
RHBDD3Q9Y3P4 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
RHBDD3Q9Y3P4 AC104118.1-201ENST00000607625 1589 ntBASIC4.64□□□□□ -1.67
RHBDD3Q9Y3P4 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.64□□□□□ -1.67
RHBDD3Q9Y3P4 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
RHBDD3Q9Y3P4 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
RHBDD3Q9Y3P4 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC4.64□□□□□ -1.67
RHBDD3Q9Y3P4 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
RHBDD3Q9Y3P4 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
RHBDD3Q9Y3P4 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.64□□□□□ -1.67
RHBDD3Q9Y3P4 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
RHBDD3Q9Y3P4 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
RHBDD3Q9Y3P4 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
RHBDD3Q9Y3P4 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
RHBDD3Q9Y3P4 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
RHBDD3Q9Y3P4 AC010329.2-201ENST00000595195 2737 ntBASIC4.63□□□□□ -1.67
RHBDD3Q9Y3P4 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.63□□□□□ -1.67
RHBDD3Q9Y3P4 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
RHBDD3Q9Y3P4 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
RHBDD3Q9Y3P4 RNU4-7P-201ENST00000364758 141 ntBASIC4.63□□□□□ -1.67
RHBDD3Q9Y3P4 AL031985.1-201ENST00000392713 418 ntBASIC4.63□□□□□ -1.67
RHBDD3Q9Y3P4 NPM1P40-201ENST00000412758 733 ntBASIC4.63□□□□□ -1.67
RHBDD3Q9Y3P4 GABARAPL3-201ENST00000412799 354 ntBASIC4.63□□□□□ -1.67
RHBDD3Q9Y3P4 AC046176.1-201ENST00000435260 1170 ntBASIC4.63□□□□□ -1.67
RHBDD3Q9Y3P4 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.63□□□□□ -1.67
RHBDD3Q9Y3P4 TCEA1P3-201ENST00000443005 880 ntBASIC4.63□□□□□ -1.67
RHBDD3Q9Y3P4 AL161636.2-201ENST00000445179 927 ntBASIC4.63□□□□□ -1.67
RHBDD3Q9Y3P4 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC4.63□□□□□ -1.67
RHBDD3Q9Y3P4 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
RHBDD3Q9Y3P4 AC073909.1-201ENST00000447112 999 ntBASIC4.63□□□□□ -1.67
RHBDD3Q9Y3P4 AC105399.1-202ENST00000447303 205 ntBASIC4.63□□□□□ -1.67
RHBDD3Q9Y3P4 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC4.63□□□□□ -1.67
RHBDD3Q9Y3P4 AL672138.1-201ENST00000450604 1015 ntBASIC4.63□□□□□ -1.67
RHBDD3Q9Y3P4 RN7SL51P-201ENST00000468230 285 ntBASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 147.5 ms