Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AC022336.1-201ENST00000475510 337 ntBASIC4.43□□□□□ -1.7
LMO4P61968 AC058823.1-201ENST00000485315 474 ntBASIC4.43□□□□□ -1.7
LMO4P61968 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
LMO4P61968 AC093534.1-201ENST00000504977 132 ntBASIC4.43□□□□□ -1.7
LMO4P61968 MTND3P24-201ENST00000506306 329 ntBASIC4.43□□□□□ -1.7
LMO4P61968 AC117525.1-201ENST00000515228 503 ntBASIC4.43□□□□□ -1.7
LMO4P61968 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.43□□□□□ -1.7
LMO4P61968 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC4.43□□□□□ -1.7
LMO4P61968 AP006245.2-201ENST00000522004 300 ntBASIC4.43□□□□□ -1.7
LMO4P61968 AC138701.1-201ENST00000524329 714 ntBASIC4.43□□□□□ -1.7
LMO4P61968 ARL6IP1P3-201ENST00000524544 560 ntBASIC4.43□□□□□ -1.7
LMO4P61968 OR4A6P-201ENST00000534364 970 ntBASIC4.43□□□□□ -1.7
LMO4P61968 OR8X1P-201ENST00000534542 869 ntBASIC4.43□□□□□ -1.7
LMO4P61968 AC084824.2-201ENST00000548906 345 ntBASIC4.43□□□□□ -1.7
LMO4P61968 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.43□□□□□ -1.7
LMO4P61968 OR11H3P-201ENST00000554547 982 ntBASIC4.43□□□□□ -1.7
LMO4P61968 WDR61-205ENST00000558459 884 ntTSL 3 BASIC4.43□□□□□ -1.7
LMO4P61968 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.43□□□□□ -1.7
LMO4P61968 MIR4646-201ENST00000580775 63 ntBASIC4.43□□□□□ -1.7
LMO4P61968 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.43□□□□□ -1.7
LMO4P61968 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC4.43□□□□□ -1.7
LMO4P61968 AC022387.2-201ENST00000604050 448 ntBASIC4.43□□□□□ -1.7
LMO4P61968 AC133644.2-201ENST00000608142 540 ntBASIC4.43□□□□□ -1.7
LMO4P61968 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC4.43□□□□□ -1.7
LMO4P61968 AC090912.3-201ENST00000609775 533 ntBASIC4.43□□□□□ -1.7
LMO4P61968 AL159169.2-201ENST00000610061 1269 ntBASIC4.43□□□□□ -1.7
LMO4P61968 AL049777.1-201ENST00000622740 518 ntBASIC4.43□□□□□ -1.7
LMO4P61968 AP002799.1-201ENST00000623552 423 ntBASIC4.43□□□□□ -1.7
LMO4P61968 AC135068.5-201ENST00000624197 983 ntBASIC4.43□□□□□ -1.7
LMO4P61968 AC010872.1-201ENST00000624225 675 ntBASIC4.43□□□□□ -1.7
LMO4P61968 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC4.43□□□□□ -1.7
LMO4P61968 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
LMO4P61968 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC4.43□□□□□ -1.7
LMO4P61968 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC4.43□□□□□ -1.7
LMO4P61968 AL442128.2-201ENST00000620246 1824 ntBASIC4.43□□□□□ -1.7
LMO4P61968 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC4.43□□□□□ -1.7
LMO4P61968 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
LMO4P61968 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC4.43□□□□□ -1.7
LMO4P61968 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC4.43□□□□□ -1.7
LMO4P61968 AC073365.1-203ENST00000641055 1992 ntBASIC4.43□□□□□ -1.7
LMO4P61968 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC4.43□□□□□ -1.7
LMO4P61968 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC4.43□□□□□ -1.7
LMO4P61968 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.43□□□□□ -1.7
LMO4P61968 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.43□□□□□ -1.7
LMO4P61968 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC4.42□□□□□ -1.7
LMO4P61968 SNX18P3-202ENST00000565670 1750 ntBASIC4.42□□□□□ -1.7
LMO4P61968 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC4.42□□□□□ -1.7
LMO4P61968 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
LMO4P61968 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
LMO4P61968 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
LMO4P61968 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
LMO4P61968 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
LMO4P61968 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
LMO4P61968 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
LMO4P61968 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
LMO4P61968 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
LMO4P61968 AC114947.2-201ENST00000565748 2125 ntBASIC4.42□□□□□ -1.7
LMO4P61968 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
LMO4P61968 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
LMO4P61968 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
LMO4P61968 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
LMO4P61968 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
LMO4P61968 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
LMO4P61968 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC4.42□□□□□ -1.7
LMO4P61968 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
LMO4P61968 MIR105-1-201ENST00000385222 81 ntBASIC4.42□□□□□ -1.7
LMO4P61968 AL139039.2-201ENST00000407436 479 ntBASIC4.42□□□□□ -1.7
LMO4P61968 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.42□□□□□ -1.7
LMO4P61968 TRIM60P17-201ENST00000415181 719 ntBASIC4.42□□□□□ -1.7
LMO4P61968 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.42□□□□□ -1.7
LMO4P61968 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC4.42□□□□□ -1.7
LMO4P61968 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC4.42□□□□□ -1.7
LMO4P61968 VN1R54P-201ENST00000435210 1049 ntBASIC4.42□□□□□ -1.7
LMO4P61968 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
LMO4P61968 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.42□□□□□ -1.7
LMO4P61968 RPS23P9-201ENST00000448848 438 ntBASIC4.42□□□□□ -1.7
LMO4P61968 AL353718.1-201ENST00000451028 517 ntBASIC4.42□□□□□ -1.7
LMO4P61968 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC4.42□□□□□ -1.7
LMO4P61968 AC104634.1-201ENST00000452720 462 ntBASIC4.42□□□□□ -1.7
LMO4P61968 OFD1P3Y-201ENST00000453312 783 ntBASIC4.42□□□□□ -1.7
LMO4P61968 RPS3AP53-201ENST00000454716 778 ntBASIC4.42□□□□□ -1.7
LMO4P61968 Z92846.1-201ENST00000456203 268 ntBASIC4.42□□□□□ -1.7
LMO4P61968 AC009127.1-201ENST00000467090 155 ntBASIC4.42□□□□□ -1.7
LMO4P61968 AC091544.1-201ENST00000484702 348 ntBASIC4.42□□□□□ -1.7
LMO4P61968 RN7SL423P-201ENST00000486202 304 ntBASIC4.42□□□□□ -1.7
LMO4P61968 DUBR-205ENST00000495228 411 ntTSL 2 BASIC4.42□□□□□ -1.7
LMO4P61968 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC4.42□□□□□ -1.7
LMO4P61968 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC4.42□□□□□ -1.7
LMO4P61968 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC4.42□□□□□ -1.7
LMO4P61968 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC4.42□□□□□ -1.7
LMO4P61968 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC4.42□□□□□ -1.7
LMO4P61968 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC4.42□□□□□ -1.7
LMO4P61968 RN7SKP66-201ENST00000516681 231 ntBASIC4.42□□□□□ -1.7
LMO4P61968 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC4.42□□□□□ -1.7
LMO4P61968 SUMO2P19-201ENST00000518920 295 ntBASIC4.42□□□□□ -1.7
LMO4P61968 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC4.42□□□□□ -1.7
LMO4P61968 AC024940.3-201ENST00000538551 316 ntBASIC4.42□□□□□ -1.7
LMO4P61968 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC4.42□□□□□ -1.7
LMO4P61968 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC4.42□□□□□ -1.7
LMO4P61968 AP002884.5-201ENST00000595053 1132 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms