Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 RPL7P56-201ENST00000429441 717 ntBASIC5.77□□□□□ -1.49
VCPP55072 IGBP1P3-201ENST00000447449 1000 ntBASIC5.77□□□□□ -1.49
VCPP55072 AL356981.1-201ENST00000454879 684 ntBASIC5.77□□□□□ -1.49
VCPP55072 PSAT1P4-201ENST00000466500 526 ntBASIC5.77□□□□□ -1.49
VCPP55072 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.77□□□□□ -1.49
VCPP55072 AC068587.1-201ENST00000483613 781 ntBASIC5.77□□□□□ -1.49
VCPP55072 AC008897.1-201ENST00000494006 347 ntBASIC5.77□□□□□ -1.49
VCPP55072 BMPR1APS2-201ENST00000527904 1012 ntBASIC5.77□□□□□ -1.49
VCPP55072 AC079064.1-201ENST00000528365 362 ntBASIC5.77□□□□□ -1.49
VCPP55072 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.77□□□□□ -1.49
VCPP55072 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.77□□□□□ -1.49
VCPP55072 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.77□□□□□ -1.49
VCPP55072 AC012616.1-201ENST00000600294 197 ntBASIC5.77□□□□□ -1.49
VCPP55072 AC025574.2-201ENST00000615621 514 ntBASIC5.77□□□□□ -1.49
VCPP55072 AC010266.2-201ENST00000564741 3255 ntBASIC5.77□□□□□ -1.49
VCPP55072 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
VCPP55072 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
VCPP55072 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
VCPP55072 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
VCPP55072 OR9K1P-202ENST00000641111 3217 ntBASIC5.77□□□□□ -1.49
VCPP55072 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.77□□□□□ -1.49
VCPP55072 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
VCPP55072 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.77□□□□□ -1.49
VCPP55072 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.77□□□□□ -1.49
VCPP55072 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
VCPP55072 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
VCPP55072 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.77□□□□□ -1.49
VCPP55072 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC5.77□□□□□ -1.49
VCPP55072 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
VCPP55072 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
VCPP55072 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
VCPP55072 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.76□□□□□ -1.49
VCPP55072 AP001029.2-203ENST00000589795 4910 ntBASIC5.76□□□□□ -1.49
VCPP55072 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.76□□□□□ -1.49
VCPP55072 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.76□□□□□ -1.49
VCPP55072 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.76□□□□□ -1.49
VCPP55072 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.76□□□□□ -1.49
VCPP55072 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
VCPP55072 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
VCPP55072 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
VCPP55072 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
VCPP55072 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.76□□□□□ -1.49
VCPP55072 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
VCPP55072 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
VCPP55072 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
VCPP55072 DUTP5-201ENST00000406790 469 ntBASIC5.76□□□□□ -1.49
VCPP55072 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
VCPP55072 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.76□□□□□ -1.49
VCPP55072 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.76□□□□□ -1.49
VCPP55072 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.76□□□□□ -1.49
VCPP55072 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.76□□□□□ -1.49
VCPP55072 NDUFAF4P2-201ENST00000445374 520 ntBASIC5.76□□□□□ -1.49
VCPP55072 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC5.76□□□□□ -1.49
VCPP55072 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC5.76□□□□□ -1.49
VCPP55072 AC021106.1-201ENST00000509020 1058 ntBASIC5.76□□□□□ -1.49
VCPP55072 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.76□□□□□ -1.49
VCPP55072 RN7SKP99-201ENST00000517028 307 ntBASIC5.76□□□□□ -1.49
VCPP55072 AC013701.1-201ENST00000522657 465 ntBASIC5.76□□□□□ -1.49
VCPP55072 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
VCPP55072 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.76□□□□□ -1.49
VCPP55072 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.76□□□□□ -1.49
VCPP55072 AC015849.6-201ENST00000605454 474 ntBASIC5.76□□□□□ -1.49
VCPP55072 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
VCPP55072 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.76□□□□□ -1.49
VCPP55072 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
VCPP55072 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
VCPP55072 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
VCPP55072 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
VCPP55072 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
VCPP55072 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
VCPP55072 NAMPTP1-201ENST00000440465 2514 ntBASIC5.76□□□□□ -1.49
VCPP55072 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
VCPP55072 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.75□□□□□ -1.49
VCPP55072 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.75□□□□□ -1.49
VCPP55072 AC092111.2-201ENST00000611627 1414 ntBASIC5.75□□□□□ -1.49
VCPP55072 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
VCPP55072 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
VCPP55072 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
VCPP55072 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
VCPP55072 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
VCPP55072 AC126755.2-208ENST00000327792 462 ntBASIC5.75□□□□□ -1.49
VCPP55072 AC138969.1-213ENST00000331436 462 ntBASIC5.75□□□□□ -1.49
VCPP55072 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.75□□□□□ -1.49
VCPP55072 SNORA51.8-201ENST00000384234 132 ntBASIC5.75□□□□□ -1.49
VCPP55072 MIR192-201ENST00000384915 110 ntBASIC5.75□□□□□ -1.49
VCPP55072 U3.36-201ENST00000408418 213 ntBASIC5.75□□□□□ -1.49
VCPP55072 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.75□□□□□ -1.49
VCPP55072 AL356968.2-201ENST00000412769 1257 ntBASIC5.75□□□□□ -1.49
VCPP55072 RPSAP35-201ENST00000413753 818 ntBASIC5.75□□□□□ -1.49
VCPP55072 AC016712.1-201ENST00000431088 378 ntBASIC5.75□□□□□ -1.49
VCPP55072 AC092647.3-201ENST00000443044 633 ntBASIC5.75□□□□□ -1.49
VCPP55072 TPT1P12-201ENST00000448968 492 ntBASIC5.75□□□□□ -1.49
VCPP55072 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.75□□□□□ -1.49
VCPP55072 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC5.75□□□□□ -1.49
VCPP55072 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.75□□□□□ -1.49
VCPP55072 HPRT1P1-201ENST00000509498 657 ntBASIC5.75□□□□□ -1.49
VCPP55072 AC091912.1-201ENST00000511351 248 ntBASIC5.75□□□□□ -1.49
VCPP55072 OR5AZ1P-201ENST00000527448 943 ntBASIC5.75□□□□□ -1.49
VCPP55072 AC063949.1-201ENST00000552900 865 ntBASIC5.75□□□□□ -1.49
VCPP55072 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms