Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
BDNFP23560 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.96□□□□□ -1.45
BDNFP23560 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.96□□□□□ -1.45
BDNFP23560 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.96□□□□□ -1.45
BDNFP23560 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
BDNFP23560 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
BDNFP23560 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
BDNFP23560 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.96□□□□□ -1.46
BDNFP23560 RNA5SP132-201ENST00000364725 118 ntBASIC5.96□□□□□ -1.46
BDNFP23560 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
BDNFP23560 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
BDNFP23560 GAPDHP42-201ENST00000406848 981 ntBASIC5.96□□□□□ -1.46
BDNFP23560 EIF4A1P3-201ENST00000411521 244 ntBASIC5.96□□□□□ -1.46
BDNFP23560 AC019050.1-201ENST00000418508 492 ntBASIC5.96□□□□□ -1.46
BDNFP23560 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.96□□□□□ -1.46
BDNFP23560 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.96□□□□□ -1.46
BDNFP23560 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
BDNFP23560 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.96□□□□□ -1.46
BDNFP23560 MTND5P8-201ENST00000449817 1083 ntBASIC5.96□□□□□ -1.46
BDNFP23560 AL450023.1-201ENST00000450868 751 ntBASIC5.96□□□□□ -1.46
BDNFP23560 RPL7P48-201ENST00000461513 746 ntBASIC5.96□□□□□ -1.46
BDNFP23560 EIF3LP3-201ENST00000495197 822 ntBASIC5.96□□□□□ -1.46
BDNFP23560 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.96□□□□□ -1.46
BDNFP23560 ATP5LP3-201ENST00000514223 304 ntBASIC5.96□□□□□ -1.46
BDNFP23560 GAPDHP62-201ENST00000515313 990 ntBASIC5.96□□□□□ -1.46
BDNFP23560 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
BDNFP23560 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.96□□□□□ -1.46
BDNFP23560 NRBF2P4-201ENST00000520874 850 ntBASIC5.96□□□□□ -1.46
BDNFP23560 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.96□□□□□ -1.46
BDNFP23560 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.96□□□□□ -1.46
BDNFP23560 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC5.96□□□□□ -1.46
BDNFP23560 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.96□□□□□ -1.46
BDNFP23560 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC5.96□□□□□ -1.46
BDNFP23560 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.96□□□□□ -1.46
BDNFP23560 HIRAP1-201ENST00000605318 787 ntBASIC5.96□□□□□ -1.46
BDNFP23560 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.96□□□□□ -1.46
BDNFP23560 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
BDNFP23560 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC5.96□□□□□ -1.46
BDNFP23560 AC022467.1-201ENST00000614738 749 ntBASIC5.96□□□□□ -1.46
BDNFP23560 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
BDNFP23560 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.96□□□□□ -1.46
BDNFP23560 AL359715.3-201ENST00000569267 2123 ntBASIC5.96□□□□□ -1.46
BDNFP23560 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.96□□□□□ -1.46
BDNFP23560 AC235565.1-201ENST00000456962 1325 ntBASIC5.96□□□□□ -1.46
BDNFP23560 AC093311.1-201ENST00000506586 2021 ntBASIC5.96□□□□□ -1.46
BDNFP23560 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
BDNFP23560 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.95□□□□□ -1.46
BDNFP23560 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
BDNFP23560 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
BDNFP23560 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
BDNFP23560 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
BDNFP23560 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
BDNFP23560 MIR92A2-201ENST00000385299 75 ntBASIC5.95□□□□□ -1.46
BDNFP23560 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
BDNFP23560 AC092570.3-201ENST00000420113 693 ntBASIC5.95□□□□□ -1.46
BDNFP23560 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.95□□□□□ -1.46
BDNFP23560 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
BDNFP23560 AC242426.1-201ENST00000435270 960 ntBASIC5.95□□□□□ -1.46
BDNFP23560 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.95□□□□□ -1.46
BDNFP23560 AC019185.1-201ENST00000442718 389 ntBASIC5.95□□□□□ -1.46
BDNFP23560 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
BDNFP23560 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
BDNFP23560 VDAC2P4-201ENST00000452925 711 ntBASIC5.95□□□□□ -1.46
BDNFP23560 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.95□□□□□ -1.46
BDNFP23560 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.95□□□□□ -1.46
BDNFP23560 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC5.95□□□□□ -1.46
BDNFP23560 AC008410.1-201ENST00000483777 339 ntBASIC5.95□□□□□ -1.46
BDNFP23560 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
BDNFP23560 UBA52P3-201ENST00000491303 382 ntBASIC5.95□□□□□ -1.46
BDNFP23560 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
BDNFP23560 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.95□□□□□ -1.46
BDNFP23560 IGKV2D-10-201ENST00000520194 281 ntBASIC5.95□□□□□ -1.46
BDNFP23560 AC139697.1-201ENST00000548429 745 ntBASIC5.95□□□□□ -1.46
BDNFP23560 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC5.95□□□□□ -1.46
BDNFP23560 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC5.95□□□□□ -1.46
BDNFP23560 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.95□□□□□ -1.46
BDNFP23560 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.95□□□□□ -1.46
BDNFP23560 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.95□□□□□ -1.46
BDNFP23560 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.95□□□□□ -1.46
BDNFP23560 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.95□□□□□ -1.46
BDNFP23560 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.95□□□□□ -1.46
BDNFP23560 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC5.95□□□□□ -1.46
BDNFP23560 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.95□□□□□ -1.46
BDNFP23560 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
BDNFP23560 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
BDNFP23560 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
BDNFP23560 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
BDNFP23560 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
BDNFP23560 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.95□□□□□ -1.46
BDNFP23560 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
BDNFP23560 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.95□□□□□ -1.46
BDNFP23560 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
BDNFP23560 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
BDNFP23560 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.94□□□□□ -1.46
BDNFP23560 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
BDNFP23560 AC009501.3-201ENST00000605001 1352 ntBASIC5.94□□□□□ -1.46
BDNFP23560 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.94□□□□□ -1.46
BDNFP23560 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
BDNFP23560 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5.94□□□□□ -1.46
BDNFP23560 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms