Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 AC099670.1-201ENST00000455141 783 ntBASIC7.29□□□□□ -1.24
LIG1P18858 AC069528.1-202ENST00000482888 637 ntBASIC7.29□□□□□ -1.24
LIG1P18858 RPL19P11-201ENST00000495944 589 ntBASIC7.29□□□□□ -1.24
LIG1P18858 AC023050.1-201ENST00000498198 304 ntBASIC7.29□□□□□ -1.24
LIG1P18858 AC008565.1-201ENST00000509046 885 ntBASIC7.29□□□□□ -1.24
LIG1P18858 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC7.29□□□□□ -1.24
LIG1P18858 AP001804.1-201ENST00000526868 919 ntBASIC7.29□□□□□ -1.24
LIG1P18858 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
LIG1P18858 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
LIG1P18858 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC7.29□□□□□ -1.24
LIG1P18858 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC7.29□□□□□ -1.24
LIG1P18858 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC7.29□□□□□ -1.24
LIG1P18858 AC010198.2-201ENST00000550612 259 ntBASIC7.29□□□□□ -1.24
LIG1P18858 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC7.29□□□□□ -1.24
LIG1P18858 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC7.29□□□□□ -1.24
LIG1P18858 LINC00556-201ENST00000569603 412 ntBASIC7.29□□□□□ -1.24
LIG1P18858 AC074051.3-201ENST00000570238 358 ntBASIC7.29□□□□□ -1.24
LIG1P18858 MIR3189-201ENST00000578735 73 ntBASIC7.29□□□□□ -1.24
LIG1P18858 AC091135.1-201ENST00000585943 307 ntBASIC7.29□□□□□ -1.24
LIG1P18858 EIF4A2P1-201ENST00000587313 1063 ntBASIC7.29□□□□□ -1.24
LIG1P18858 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC7.29□□□□□ -1.24
LIG1P18858 AC073544.2-201ENST00000601155 540 ntBASIC7.29□□□□□ -1.24
LIG1P18858 AC021749.1-201ENST00000604322 607 ntBASIC7.29□□□□□ -1.24
LIG1P18858 AL008723.3-201ENST00000608926 449 ntBASIC7.29□□□□□ -1.24
LIG1P18858 IGKV2OR2-10-201ENST00000613976 311 ntBASIC7.29□□□□□ -1.24
LIG1P18858 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC7.29□□□□□ -1.24
LIG1P18858 MIR6823-201ENST00000622118 61 ntBASIC7.29□□□□□ -1.24
LIG1P18858 RBM12B-AS1-201ENST00000623283 653 ntBASIC7.29□□□□□ -1.24
LIG1P18858 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC7.29□□□□□ -1.24
LIG1P18858 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC7.29□□□□□ -1.24
LIG1P18858 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC7.29□□□□□ -1.24
LIG1P18858 AC068137.3-201ENST00000639191 341 ntBASIC7.29□□□□□ -1.24
LIG1P18858 AC073869.6-201ENST00000640656 341 ntBASIC7.29□□□□□ -1.24
LIG1P18858 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
LIG1P18858 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC7.29□□□□□ -1.24
LIG1P18858 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC7.29□□□□□ -1.24
LIG1P18858 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
LIG1P18858 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC7.29□□□□□ -1.24
LIG1P18858 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
LIG1P18858 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC7.29□□□□□ -1.24
LIG1P18858 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
LIG1P18858 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC7.29□□□□□ -1.24
LIG1P18858 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
LIG1P18858 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
LIG1P18858 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
LIG1P18858 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
LIG1P18858 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
LIG1P18858 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
LIG1P18858 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC7.28□□□□□ -1.24
LIG1P18858 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
LIG1P18858 RNA5SP350-201ENST00000363298 111 ntBASIC7.28□□□□□ -1.24
LIG1P18858 RNU6-413P-201ENST00000384115 107 ntBASIC7.28□□□□□ -1.24
LIG1P18858 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
LIG1P18858 CAV1-204ENST00000393470 598 ntTSL 4 BASIC7.28□□□□□ -1.24
LIG1P18858 RN7SKP166-201ENST00000410812 305 ntBASIC7.28□□□□□ -1.24
LIG1P18858 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC7.28□□□□□ -1.24
LIG1P18858 BTF3P8-201ENST00000414577 526 ntBASIC7.28□□□□□ -1.24
LIG1P18858 UBE2V1P14-201ENST00000415815 558 ntBASIC7.28□□□□□ -1.24
LIG1P18858 Z75741.2-201ENST00000417272 1167 ntBASIC7.28□□□□□ -1.24
LIG1P18858 Z82198.3-201ENST00000421145 199 ntBASIC7.28□□□□□ -1.24
LIG1P18858 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC7.28□□□□□ -1.24
LIG1P18858 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC7.28□□□□□ -1.24
LIG1P18858 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC7.28□□□□□ -1.24
LIG1P18858 HSD52-202ENST00000436225 772 ntTSL 3 BASIC7.28□□□□□ -1.24
LIG1P18858 Z74696.2-201ENST00000436514 498 ntBASIC7.28□□□□□ -1.24
LIG1P18858 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC7.28□□□□□ -1.24
LIG1P18858 AC096632.2-201ENST00000438139 1239 ntBASIC7.28□□□□□ -1.24
LIG1P18858 AL357520.1-201ENST00000441557 453 ntBASIC7.28□□□□□ -1.24
LIG1P18858 GAPDHP37-201ENST00000442317 968 ntBASIC7.28□□□□□ -1.24
LIG1P18858 DNAJC19P5-201ENST00000443295 316 ntBASIC7.28□□□□□ -1.24
LIG1P18858 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
LIG1P18858 RPS18P1-201ENST00000447840 458 ntBASIC7.28□□□□□ -1.24
LIG1P18858 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC7.28□□□□□ -1.24
LIG1P18858 CCRL1P1-201ENST00000449542 1053 ntBASIC7.28□□□□□ -1.24
LIG1P18858 AC026348.1-201ENST00000462549 1053 ntBASIC7.28□□□□□ -1.24
LIG1P18858 NDUFA5P5-201ENST00000468361 342 ntBASIC7.28□□□□□ -1.24
LIG1P18858 RPL7P40-201ENST00000481703 745 ntBASIC7.28□□□□□ -1.24
LIG1P18858 AC016687.1-201ENST00000482574 353 ntBASIC7.28□□□□□ -1.24
LIG1P18858 RN7SL413P-201ENST00000482700 297 ntBASIC7.28□□□□□ -1.24
LIG1P18858 AC069304.1-201ENST00000491593 704 ntBASIC7.28□□□□□ -1.24
LIG1P18858 AC008885.2-201ENST00000509506 930 ntBASIC7.28□□□□□ -1.24
LIG1P18858 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC7.28□□□□□ -1.24
LIG1P18858 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
LIG1P18858 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
LIG1P18858 AL121766.1-201ENST00000547436 487 ntBASIC7.28□□□□□ -1.24
LIG1P18858 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
LIG1P18858 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC7.28□□□□□ -1.24
LIG1P18858 BLZF2P-201ENST00000553776 1130 ntBASIC7.28□□□□□ -1.24
LIG1P18858 AC037479.1-201ENST00000558361 625 ntBASIC7.28□□□□□ -1.24
LIG1P18858 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC7.28□□□□□ -1.24
LIG1P18858 AC026956.1-201ENST00000558741 396 ntBASIC7.28□□□□□ -1.24
LIG1P18858 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC7.28□□□□□ -1.24
LIG1P18858 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC7.28□□□□□ -1.24
LIG1P18858 RN7SL208P-201ENST00000577964 296 ntBASIC7.28□□□□□ -1.24
LIG1P18858 AC138207.8-204ENST00000579588 527 ntBASIC7.28□□□□□ -1.24
LIG1P18858 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC7.28□□□□□ -1.24
LIG1P18858 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC7.28□□□□□ -1.24
LIG1P18858 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC7.28□□□□□ -1.24
LIG1P18858 AP000403.1-201ENST00000603349 851 ntBASIC7.28□□□□□ -1.24
LIG1P18858 LSM1P2-201ENST00000604911 322 ntBASIC7.28□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms