Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 METTL15-211ENST00000634762 718 ntTSL 5 BASIC4.81□□□□□ -1.64
TRAPPC4Q9Y296 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TRAPPC4Q9Y296 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.81□□□□□ -1.64
TRAPPC4Q9Y296 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
TRAPPC4Q9Y296 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TRAPPC4Q9Y296 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
TRAPPC4Q9Y296 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
TRAPPC4Q9Y296 AC003973.3-201ENST00000624863 2822 ntBASIC4.81□□□□□ -1.64
TRAPPC4Q9Y296 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TRAPPC4Q9Y296 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TRAPPC4Q9Y296 AC021242.1-201ENST00000507315 2035 ntBASIC4.8□□□□□ -1.64
TRAPPC4Q9Y296 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TRAPPC4Q9Y296 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TRAPPC4Q9Y296 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.8□□□□□ -1.64
TRAPPC4Q9Y296 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
TRAPPC4Q9Y296 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TRAPPC4Q9Y296 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC4.8□□□□□ -1.64
TRAPPC4Q9Y296 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.8□□□□□ -1.64
TRAPPC4Q9Y296 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TRAPPC4Q9Y296 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC4.8□□□□□ -1.64
TRAPPC4Q9Y296 RNA5SP339-201ENST00000390987 122 ntBASIC4.8□□□□□ -1.64
TRAPPC4Q9Y296 U3.25-201ENST00000391209 220 ntBASIC4.8□□□□□ -1.64
TRAPPC4Q9Y296 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.8□□□□□ -1.64
TRAPPC4Q9Y296 RPL36AP10-201ENST00000421785 322 ntBASIC4.8□□□□□ -1.64
TRAPPC4Q9Y296 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.8□□□□□ -1.64
TRAPPC4Q9Y296 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.8□□□□□ -1.64
TRAPPC4Q9Y296 SIAH1P1-201ENST00000479411 923 ntBASIC4.8□□□□□ -1.64
TRAPPC4Q9Y296 RPL7P39-201ENST00000481157 744 ntBASIC4.8□□□□□ -1.64
TRAPPC4Q9Y296 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.8□□□□□ -1.64
TRAPPC4Q9Y296 RPL15P21-201ENST00000495592 567 ntBASIC4.8□□□□□ -1.64
TRAPPC4Q9Y296 NIFKP7-201ENST00000503365 834 ntBASIC4.8□□□□□ -1.64
TRAPPC4Q9Y296 AC138409.2-202ENST00000507274 458 ntBASIC4.8□□□□□ -1.64
TRAPPC4Q9Y296 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.8□□□□□ -1.64
TRAPPC4Q9Y296 IGKV2-18-201ENST00000522607 343 ntBASIC4.8□□□□□ -1.64
TRAPPC4Q9Y296 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.8□□□□□ -1.64
TRAPPC4Q9Y296 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
TRAPPC4Q9Y296 AC126177.5-201ENST00000549599 178 ntBASIC4.8□□□□□ -1.64
TRAPPC4Q9Y296 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC4.8□□□□□ -1.64
TRAPPC4Q9Y296 CLMN-206ENST00000556441 452 ntTSL 5 BASIC4.8□□□□□ -1.64
TRAPPC4Q9Y296 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC4.8□□□□□ -1.64
TRAPPC4Q9Y296 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC4.8□□□□□ -1.64
TRAPPC4Q9Y296 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.8□□□□□ -1.64
TRAPPC4Q9Y296 MIR6768-201ENST00000610734 72 ntBASIC4.8□□□□□ -1.64
TRAPPC4Q9Y296 MIR6839-201ENST00000620425 113 ntBASIC4.8□□□□□ -1.64
TRAPPC4Q9Y296 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC4.8□□□□□ -1.64
TRAPPC4Q9Y296 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.8□□□□□ -1.64
TRAPPC4Q9Y296 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC4.8□□□□□ -1.64
TRAPPC4Q9Y296 AC099654.6-201ENST00000636487 512 ntBASIC4.8□□□□□ -1.64
TRAPPC4Q9Y296 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.8□□□□□ -1.64
TRAPPC4Q9Y296 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.8□□□□□ -1.64
TRAPPC4Q9Y296 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.8□□□□□ -1.64
TRAPPC4Q9Y296 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TRAPPC4Q9Y296 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
TRAPPC4Q9Y296 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TRAPPC4Q9Y296 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TRAPPC4Q9Y296 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
TRAPPC4Q9Y296 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC4.8□□□□□ -1.64
TRAPPC4Q9Y296 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.8□□□□□ -1.64
TRAPPC4Q9Y296 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TRAPPC4Q9Y296 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
TRAPPC4Q9Y296 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
TRAPPC4Q9Y296 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TRAPPC4Q9Y296 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC4.79□□□□□ -1.64
TRAPPC4Q9Y296 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TRAPPC4Q9Y296 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC4.79□□□□□ -1.64
TRAPPC4Q9Y296 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TRAPPC4Q9Y296 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
TRAPPC4Q9Y296 RNA5SP183-201ENST00000362452 119 ntBASIC4.79□□□□□ -1.64
TRAPPC4Q9Y296 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TRAPPC4Q9Y296 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
TRAPPC4Q9Y296 RN7SKP16-201ENST00000410180 299 ntBASIC4.79□□□□□ -1.64
TRAPPC4Q9Y296 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC4.79□□□□□ -1.64
TRAPPC4Q9Y296 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TRAPPC4Q9Y296 AL121578.1-201ENST00000428051 892 ntBASIC4.79□□□□□ -1.64
TRAPPC4Q9Y296 FAM96AP1-201ENST00000430879 482 ntBASIC4.79□□□□□ -1.64
TRAPPC4Q9Y296 CYCSP6-201ENST00000434498 302 ntBASIC4.79□□□□□ -1.64
TRAPPC4Q9Y296 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.79□□□□□ -1.64
TRAPPC4Q9Y296 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC4.79□□□□□ -1.64
TRAPPC4Q9Y296 CBX1P5-201ENST00000475330 559 ntBASIC4.79□□□□□ -1.64
TRAPPC4Q9Y296 RPL7P6-201ENST00000480903 738 ntBASIC4.79□□□□□ -1.64
TRAPPC4Q9Y296 AC058823.1-201ENST00000485315 474 ntBASIC4.79□□□□□ -1.64
TRAPPC4Q9Y296 ARL4AP1-201ENST00000503220 705 ntBASIC4.79□□□□□ -1.64
TRAPPC4Q9Y296 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC4.79□□□□□ -1.64
TRAPPC4Q9Y296 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC4.79□□□□□ -1.64
TRAPPC4Q9Y296 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC4.79□□□□□ -1.64
TRAPPC4Q9Y296 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TRAPPC4Q9Y296 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC4.79□□□□□ -1.64
TRAPPC4Q9Y296 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.79□□□□□ -1.64
TRAPPC4Q9Y296 AC009597.2-201ENST00000604659 592 ntBASIC4.79□□□□□ -1.64
TRAPPC4Q9Y296 AL161912.3-201ENST00000605404 628 ntBASIC4.79□□□□□ -1.64
TRAPPC4Q9Y296 RNU6-84P-201ENST00000607737 102 ntBASIC4.79□□□□□ -1.64
TRAPPC4Q9Y296 CASC19-264ENST00000641912 1184 ntBASIC4.79□□□□□ -1.64
TRAPPC4Q9Y296 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
TRAPPC4Q9Y296 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
TRAPPC4Q9Y296 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.79□□□□□ -1.64
TRAPPC4Q9Y296 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
TRAPPC4Q9Y296 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TRAPPC4Q9Y296 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TRAPPC4Q9Y296 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
TRAPPC4Q9Y296 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms