Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 RNU11-201ENST00000387069 134 ntBASIC7.69□□□□□ -1.18
SCAPERQ9BY12 GTF2IP5-201ENST00000414608 731 ntBASIC7.69□□□□□ -1.18
SCAPERQ9BY12 BX510359.2-201ENST00000417920 305 ntBASIC7.69□□□□□ -1.18
SCAPERQ9BY12 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
SCAPERQ9BY12 AC234779.1-201ENST00000425910 285 ntBASIC7.69□□□□□ -1.18
SCAPERQ9BY12 TXNP5-201ENST00000441043 315 ntBASIC7.69□□□□□ -1.18
SCAPERQ9BY12 EIF2S2P2-201ENST00000447161 982 ntBASIC7.69□□□□□ -1.18
SCAPERQ9BY12 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC7.69□□□□□ -1.18
SCAPERQ9BY12 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC7.69□□□□□ -1.18
SCAPERQ9BY12 AK3P4-201ENST00000504283 583 ntBASIC7.69□□□□□ -1.18
SCAPERQ9BY12 RN7SKP92-201ENST00000517266 244 ntBASIC7.69□□□□□ -1.18
SCAPERQ9BY12 MIR1254-2-201ENST00000579553 63 ntBASIC7.69□□□□□ -1.18
SCAPERQ9BY12 GMFG-202ENST00000594700 397 ntTSL 2 BASIC7.69□□□□□ -1.18
SCAPERQ9BY12 AL360012.1-201ENST00000602813 131 ntBASIC7.69□□□□□ -1.18
SCAPERQ9BY12 AC103792.1-201ENST00000603591 919 ntBASIC7.69□□□□□ -1.18
SCAPERQ9BY12 AC098935.2-201ENST00000604222 466 ntBASIC7.69□□□□□ -1.18
SCAPERQ9BY12 AC005377.1-201ENST00000605126 456 ntBASIC7.69□□□□□ -1.18
SCAPERQ9BY12 AC068724.3-201ENST00000625906 87 ntBASIC7.69□□□□□ -1.18
SCAPERQ9BY12 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC7.69□□□□□ -1.18
SCAPERQ9BY12 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC7.69□□□□□ -1.18
SCAPERQ9BY12 AC091046.3-201ENST00000631455 1574 ntBASIC7.68□□□□□ -1.18
SCAPERQ9BY12 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
SCAPERQ9BY12 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC7.68□□□□□ -1.18
SCAPERQ9BY12 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
SCAPERQ9BY12 AC078842.2-201ENST00000447529 1835 ntTSL 2 BASIC7.68□□□□□ -1.18
SCAPERQ9BY12 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
SCAPERQ9BY12 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
SCAPERQ9BY12 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC7.68□□□□□ -1.18
SCAPERQ9BY12 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC7.68□□□□□ -1.18
SCAPERQ9BY12 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
SCAPERQ9BY12 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC7.68□□□□□ -1.18
SCAPERQ9BY12 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
SCAPERQ9BY12 OR9G4-201ENST00000302957 984 ntBASIC7.68□□□□□ -1.18
SCAPERQ9BY12 MAX-203ENST00000341653 330 ntTSL 2 BASIC7.68□□□□□ -1.18
SCAPERQ9BY12 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC7.68□□□□□ -1.18
SCAPERQ9BY12 U3.22-201ENST00000391120 215 ntBASIC7.68□□□□□ -1.18
SCAPERQ9BY12 AL021331.1-201ENST00000402817 582 ntBASIC7.68□□□□□ -1.18
SCAPERQ9BY12 ELOCP19-201ENST00000411919 318 ntBASIC7.68□□□□□ -1.18
SCAPERQ9BY12 OR1H1P-201ENST00000448731 937 ntBASIC7.68□□□□□ -1.18
SCAPERQ9BY12 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC7.68□□□□□ -1.18
SCAPERQ9BY12 OR52A4P-201ENST00000472867 958 ntBASIC7.68□□□□□ -1.18
SCAPERQ9BY12 AC093827.1-201ENST00000480094 861 ntBASIC7.68□□□□□ -1.18
SCAPERQ9BY12 RPL7P41-201ENST00000485823 957 ntBASIC7.68□□□□□ -1.18
SCAPERQ9BY12 RN7SKP276-201ENST00000516242 268 ntBASIC7.68□□□□□ -1.18
SCAPERQ9BY12 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC7.68□□□□□ -1.18
SCAPERQ9BY12 MIR4675-201ENST00000577898 77 ntBASIC7.68□□□□□ -1.18
SCAPERQ9BY12 AC020915.5-201ENST00000596836 964 ntBASIC7.68□□□□□ -1.18
SCAPERQ9BY12 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC7.68□□□□□ -1.18
SCAPERQ9BY12 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC7.68□□□□□ -1.18
SCAPERQ9BY12 DCN-218ENST00000551354 2924 ntTSL 3 BASIC7.68□□□□□ -1.18
SCAPERQ9BY12 DMD-205ENST00000359836 7339 ntTSL 5 BASIC7.67□□□□□ -1.18
SCAPERQ9BY12 ALB-214ENST00000509063 1911 ntTSL 5 BASIC7.67□□□□□ -1.18
SCAPERQ9BY12 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
SCAPERQ9BY12 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
SCAPERQ9BY12 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
SCAPERQ9BY12 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
SCAPERQ9BY12 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
SCAPERQ9BY12 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
SCAPERQ9BY12 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
SCAPERQ9BY12 AL355488.2-201ENST00000609909 2850 ntBASIC7.67□□□□□ -1.18
SCAPERQ9BY12 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC7.67□□□□□ -1.18
SCAPERQ9BY12 MAPK10-270ENST00000641102 3538 ntBASIC7.67□□□□□ -1.18
SCAPERQ9BY12 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
SCAPERQ9BY12 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
SCAPERQ9BY12 MIR298-201ENST00000401212 88 ntBASIC7.67□□□□□ -1.18
SCAPERQ9BY12 RN7SKP27-201ENST00000410684 333 ntBASIC7.67□□□□□ -1.18
SCAPERQ9BY12 SLC9B1P4-201ENST00000421957 1288 ntBASIC7.67□□□□□ -1.18
SCAPERQ9BY12 AL590399.2-201ENST00000427536 309 ntBASIC7.67□□□□□ -1.18
SCAPERQ9BY12 MRPS21P3-201ENST00000436696 262 ntBASIC7.67□□□□□ -1.18
SCAPERQ9BY12 AC005154.2-201ENST00000438110 379 ntBASIC7.67□□□□□ -1.18
SCAPERQ9BY12 AC009963.4-201ENST00000448535 339 ntBASIC7.67□□□□□ -1.18
SCAPERQ9BY12 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC7.67□□□□□ -1.18
SCAPERQ9BY12 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC7.67□□□□□ -1.18
SCAPERQ9BY12 FGB-207ENST00000509493 1164 ntTSL 5 BASIC7.67□□□□□ -1.18
SCAPERQ9BY12 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC7.67□□□□□ -1.18
SCAPERQ9BY12 OR5M2P-201ENST00000529003 936 ntBASIC7.67□□□□□ -1.18
SCAPERQ9BY12 AC108738.1-201ENST00000603703 237 ntBASIC7.67□□□□□ -1.18
SCAPERQ9BY12 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
SCAPERQ9BY12 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
SCAPERQ9BY12 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
SCAPERQ9BY12 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
SCAPERQ9BY12 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC7.66□□□□□ -1.18
SCAPERQ9BY12 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC7.66□□□□□ -1.18
SCAPERQ9BY12 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
SCAPERQ9BY12 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
SCAPERQ9BY12 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
SCAPERQ9BY12 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC7.66□□□□□ -1.18
SCAPERQ9BY12 AC099654.2-201ENST00000433031 1980 ntBASIC7.66□□□□□ -1.18
SCAPERQ9BY12 SNORA70F-201ENST00000384142 135 ntBASIC7.66□□□□□ -1.18
SCAPERQ9BY12 MIR589-201ENST00000385238 99 ntBASIC7.66□□□□□ -1.18
SCAPERQ9BY12 SNORA77-201ENST00000408716 125 ntBASIC7.66□□□□□ -1.18
SCAPERQ9BY12 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC7.66□□□□□ -1.18
SCAPERQ9BY12 RPL17P36-201ENST00000420302 549 ntBASIC7.66□□□□□ -1.18
SCAPERQ9BY12 CENPIP1-201ENST00000425713 902 ntBASIC7.66□□□□□ -1.18
SCAPERQ9BY12 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC7.66□□□□□ -1.18
SCAPERQ9BY12 SOX5P1-201ENST00000524155 1127 ntBASIC7.66□□□□□ -1.18
SCAPERQ9BY12 FAM174B-202ENST00000553393 495 ntTSL 2 BASIC7.66□□□□□ -1.18
SCAPERQ9BY12 EIF1P5-201ENST00000585002 234 ntBASIC7.66□□□□□ -1.18
SCAPERQ9BY12 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC7.66□□□□□ -1.18
SCAPERQ9BY12 AC010857.1-201ENST00000606398 594 ntBASIC7.66□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms