Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 AC002486.2-201ENST00000447806 590 ntBASIC8.09□□□□□ -1.11
TRIM47Q96LD4 AC097359.1-201ENST00000447946 463 ntBASIC8.09□□□□□ -1.11
TRIM47Q96LD4 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC8.09□□□□□ -1.11
TRIM47Q96LD4 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC8.09□□□□□ -1.11
TRIM47Q96LD4 SNORA81.1-201ENST00000458922 177 ntBASIC8.09□□□□□ -1.11
TRIM47Q96LD4 RPS26P11-201ENST00000463445 348 ntBASIC8.09□□□□□ -1.11
TRIM47Q96LD4 RPS26P6-201ENST00000475156 348 ntBASIC8.09□□□□□ -1.11
TRIM47Q96LD4 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
TRIM47Q96LD4 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC8.09□□□□□ -1.11
TRIM47Q96LD4 FAM172BP-201ENST00000487497 1089 ntBASIC8.09□□□□□ -1.11
TRIM47Q96LD4 AC008967.1-201ENST00000504843 163 ntBASIC8.09□□□□□ -1.11
TRIM47Q96LD4 HSPE1P23-201ENST00000509838 286 ntBASIC8.09□□□□□ -1.11
TRIM47Q96LD4 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
TRIM47Q96LD4 RPL10P18-201ENST00000519384 309 ntBASIC8.09□□□□□ -1.11
TRIM47Q96LD4 SMARCE1P4-201ENST00000523647 241 ntBASIC8.09□□□□□ -1.11
TRIM47Q96LD4 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC8.09□□□□□ -1.11
TRIM47Q96LD4 DEFB130C-202ENST00000530001 230 ntBASIC8.09□□□□□ -1.11
TRIM47Q96LD4 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC8.09□□□□□ -1.11
TRIM47Q96LD4 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
TRIM47Q96LD4 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC8.09□□□□□ -1.11
TRIM47Q96LD4 AC020661.2-201ENST00000560114 134 ntBASIC8.09□□□□□ -1.11
TRIM47Q96LD4 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC8.09□□□□□ -1.11
TRIM47Q96LD4 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC8.09□□□□□ -1.11
TRIM47Q96LD4 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC8.09□□□□□ -1.11
TRIM47Q96LD4 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
TRIM47Q96LD4 DYNLL1P1-201ENST00000595442 269 ntBASIC8.09□□□□□ -1.11
TRIM47Q96LD4 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC8.09□□□□□ -1.11
TRIM47Q96LD4 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC8.09□□□□□ -1.11
TRIM47Q96LD4 MIR6862-1-201ENST00000613016 70 ntBASIC8.09□□□□□ -1.11
TRIM47Q96LD4 MIR6862-2-201ENST00000614755 70 ntBASIC8.09□□□□□ -1.11
TRIM47Q96LD4 AC138649.3-201ENST00000622154 254 ntBASIC8.09□□□□□ -1.11
TRIM47Q96LD4 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC8.09□□□□□ -1.11
TRIM47Q96LD4 SPATA31C2-201ENST00000324915 3777 ntBASIC8.09□□□□□ -1.11
TRIM47Q96LD4 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC8.09□□□□□ -1.11
TRIM47Q96LD4 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC8.09□□□□□ -1.11
TRIM47Q96LD4 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
TRIM47Q96LD4 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
TRIM47Q96LD4 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC8.09□□□□□ -1.11
TRIM47Q96LD4 AC020978.6-201ENST00000571197 3177 ntBASIC8.09□□□□□ -1.11
TRIM47Q96LD4 MEIS1-202ENST00000398506 3530 ntTSL 5 BASIC8.09□□□□□ -1.11
TRIM47Q96LD4 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
TRIM47Q96LD4 RNF19BPY-201ENST00000458209 1550 ntBASIC8.09□□□□□ -1.11
TRIM47Q96LD4 AC091544.5-201ENST00000620192 3815 ntBASIC8.09□□□□□ -1.11
TRIM47Q96LD4 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
TRIM47Q96LD4 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.12
TRIM47Q96LD4 FASLG-202ENST00000367721 1888 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.12
TRIM47Q96LD4 CLCN3-202ENST00000360642 3208 ntTSL 2 BASIC8.08□□□□□ -1.12
TRIM47Q96LD4 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC8.08□□□□□ -1.12
TRIM47Q96LD4 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
TRIM47Q96LD4 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
TRIM47Q96LD4 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC8.08□□□□□ -1.12
TRIM47Q96LD4 ZNF816-203ENST00000357666 2697 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
TRIM47Q96LD4 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC8.08□□□□□ -1.12
TRIM47Q96LD4 DYNC1I2P1-201ENST00000435916 1838 ntBASIC8.08□□□□□ -1.12
TRIM47Q96LD4 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
TRIM47Q96LD4 PPP4R3CP-201ENST00000412172 3131 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
TRIM47Q96LD4 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
TRIM47Q96LD4 ZNF573-202ENST00000357309 2124 ntTSL 5 BASIC8.08□□□□□ -1.12
TRIM47Q96LD4 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
TRIM47Q96LD4 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
TRIM47Q96LD4 ANKRD62P1-201ENST00000434304 1623 ntBASIC8.08□□□□□ -1.12
TRIM47Q96LD4 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC8.08□□□□□ -1.12
TRIM47Q96LD4 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
TRIM47Q96LD4 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
TRIM47Q96LD4 Y_RNA.58-201ENST00000362807 102 ntBASIC8.08□□□□□ -1.12
TRIM47Q96LD4 Y_RNA.154-201ENST00000363624 102 ntBASIC8.08□□□□□ -1.12
TRIM47Q96LD4 RNA5SP435-201ENST00000364044 108 ntBASIC8.08□□□□□ -1.12
TRIM47Q96LD4 RNY3P1-201ENST00000365085 102 ntBASIC8.08□□□□□ -1.12
TRIM47Q96LD4 RNY3-201ENST00000365484 102 ntBASIC8.08□□□□□ -1.12
TRIM47Q96LD4 Y_RNA.490-201ENST00000384413 102 ntBASIC8.08□□□□□ -1.12
TRIM47Q96LD4 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC8.08□□□□□ -1.12
TRIM47Q96LD4 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC8.08□□□□□ -1.12
TRIM47Q96LD4 LINC01384-201ENST00000422494 659 ntTSL 3 BASIC8.08□□□□□ -1.12
TRIM47Q96LD4 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC8.08□□□□□ -1.12
TRIM47Q96LD4 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC8.08□□□□□ -1.12
TRIM47Q96LD4 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC8.08□□□□□ -1.12
TRIM47Q96LD4 AC018644.1-201ENST00000429934 551 ntBASIC8.08□□□□□ -1.12
TRIM47Q96LD4 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC8.08□□□□□ -1.12
TRIM47Q96LD4 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC8.08□□□□□ -1.12
TRIM47Q96LD4 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC8.08□□□□□ -1.12
TRIM47Q96LD4 RPL31P15-201ENST00000449770 338 ntBASIC8.08□□□□□ -1.12
TRIM47Q96LD4 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC8.08□□□□□ -1.12
TRIM47Q96LD4 RAD23BP3-201ENST00000454157 1152 ntBASIC8.08□□□□□ -1.12
TRIM47Q96LD4 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC8.08□□□□□ -1.12
TRIM47Q96LD4 AC093627.1-201ENST00000465755 877 ntTSL 3 BASIC8.08□□□□□ -1.12
TRIM47Q96LD4 RPL23P10-201ENST00000468780 412 ntBASIC8.08□□□□□ -1.12
TRIM47Q96LD4 RPS27P20-201ENST00000492051 246 ntBASIC8.08□□□□□ -1.12
TRIM47Q96LD4 OR5M14P-201ENST00000506803 618 ntBASIC8.08□□□□□ -1.12
TRIM47Q96LD4 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC8.08□□□□□ -1.12
TRIM47Q96LD4 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC8.08□□□□□ -1.12
TRIM47Q96LD4 RFESD-208ENST00000513950 464 ntTSL 5 BASIC8.08□□□□□ -1.12
TRIM47Q96LD4 AC027026.1-201ENST00000532323 742 ntBASIC8.08□□□□□ -1.12
TRIM47Q96LD4 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC8.08□□□□□ -1.12
TRIM47Q96LD4 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC8.08□□□□□ -1.12
TRIM47Q96LD4 GNG2-203ENST00000553432 577 ntTSL 4 BASIC8.08□□□□□ -1.12
TRIM47Q96LD4 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC8.08□□□□□ -1.12
TRIM47Q96LD4 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC8.08□□□□□ -1.12
TRIM47Q96LD4 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC8.08□□□□□ -1.12
TRIM47Q96LD4 AC007448.1-201ENST00000582714 234 ntBASIC8.08□□□□□ -1.12
TRIM47Q96LD4 AC015801.1-201ENST00000585651 153 ntBASIC8.08□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms