Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC6.38□□□□□ -1.39
CDK5RAP3Q96JB5 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
CDK5RAP3Q96JB5 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
CDK5RAP3Q96JB5 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
CDK5RAP3Q96JB5 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
CDK5RAP3Q96JB5 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
CDK5RAP3Q96JB5 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CDK5RAP3Q96JB5 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC6.37□□□□□ -1.39
CDK5RAP3Q96JB5 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
CDK5RAP3Q96JB5 LYPLA1P3-201ENST00000402650 695 ntBASIC6.37□□□□□ -1.39
CDK5RAP3Q96JB5 SLC20A1P1-201ENST00000413906 956 ntBASIC6.37□□□□□ -1.39
CDK5RAP3Q96JB5 BX664727.1-201ENST00000416024 466 ntBASIC6.37□□□□□ -1.39
CDK5RAP3Q96JB5 OR10T1P-201ENST00000424327 947 ntBASIC6.37□□□□□ -1.39
CDK5RAP3Q96JB5 MRPS21P2-201ENST00000424704 264 ntBASIC6.37□□□□□ -1.39
CDK5RAP3Q96JB5 AC127526.2-201ENST00000426436 775 ntBASIC6.37□□□□□ -1.39
CDK5RAP3Q96JB5 BX119904.1-201ENST00000432026 348 ntBASIC6.37□□□□□ -1.39
CDK5RAP3Q96JB5 TRBV26OR9-2-201ENST00000432077 293 ntBASIC6.37□□□□□ -1.39
CDK5RAP3Q96JB5 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC6.37□□□□□ -1.39
CDK5RAP3Q96JB5 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC6.37□□□□□ -1.39
CDK5RAP3Q96JB5 AL353898.1-201ENST00000444055 238 ntBASIC6.37□□□□□ -1.39
CDK5RAP3Q96JB5 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC6.37□□□□□ -1.39
CDK5RAP3Q96JB5 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC6.37□□□□□ -1.39
CDK5RAP3Q96JB5 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC6.37□□□□□ -1.39
CDK5RAP3Q96JB5 OR52E7P-201ENST00000452394 933 ntBASIC6.37□□□□□ -1.39
CDK5RAP3Q96JB5 AL445665.1-202ENST00000452436 324 ntBASIC6.37□□□□□ -1.39
CDK5RAP3Q96JB5 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
CDK5RAP3Q96JB5 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CDK5RAP3Q96JB5 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC6.37□□□□□ -1.39
CDK5RAP3Q96JB5 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC6.37□□□□□ -1.39
CDK5RAP3Q96JB5 PRELID3BP6-201ENST00000503839 571 ntBASIC6.37□□□□□ -1.39
CDK5RAP3Q96JB5 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC6.37□□□□□ -1.39
CDK5RAP3Q96JB5 MAL2-207ENST00000522828 603 ntTSL 3 BASIC6.37□□□□□ -1.39
CDK5RAP3Q96JB5 AP001372.4-201ENST00000524889 472 ntBASIC6.37□□□□□ -1.39
CDK5RAP3Q96JB5 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC6.37□□□□□ -1.39
CDK5RAP3Q96JB5 ZKSCAN7P1-201ENST00000543668 673 ntBASIC6.37□□□□□ -1.39
CDK5RAP3Q96JB5 NANOGNBP2-201ENST00000544753 553 ntBASIC6.37□□□□□ -1.39
CDK5RAP3Q96JB5 AC137627.1-201ENST00000545761 289 ntBASIC6.37□□□□□ -1.39
CDK5RAP3Q96JB5 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC6.37□□□□□ -1.39
CDK5RAP3Q96JB5 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC6.37□□□□□ -1.39
CDK5RAP3Q96JB5 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC6.37□□□□□ -1.39
CDK5RAP3Q96JB5 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC6.37□□□□□ -1.39
CDK5RAP3Q96JB5 AC090666.1-201ENST00000578241 445 ntBASIC6.37□□□□□ -1.39
CDK5RAP3Q96JB5 DHFRP1-201ENST00000579682 559 ntBASIC6.37□□□□□ -1.39
CDK5RAP3Q96JB5 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC6.37□□□□□ -1.39
CDK5RAP3Q96JB5 MTCO2P22-201ENST00000603246 681 ntBASIC6.37□□□□□ -1.39
CDK5RAP3Q96JB5 AC023762.1-201ENST00000603280 584 ntBASIC6.37□□□□□ -1.39
CDK5RAP3Q96JB5 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC6.37□□□□□ -1.39
CDK5RAP3Q96JB5 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC6.37□□□□□ -1.39
CDK5RAP3Q96JB5 AC079776.5-201ENST00000641920 211 ntBASIC6.37□□□□□ -1.39
CDK5RAP3Q96JB5 AP005432.1-201ENST00000580891 3485 ntBASIC6.37□□□□□ -1.39
CDK5RAP3Q96JB5 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
CDK5RAP3Q96JB5 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CDK5RAP3Q96JB5 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
CDK5RAP3Q96JB5 ZNF90P1-201ENST00000480493 1951 ntBASIC6.37□□□□□ -1.39
CDK5RAP3Q96JB5 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CDK5RAP3Q96JB5 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC6.36□□□□□ -1.39
CDK5RAP3Q96JB5 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
CDK5RAP3Q96JB5 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CDK5RAP3Q96JB5 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC6.36□□□□□ -1.39
CDK5RAP3Q96JB5 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CDK5RAP3Q96JB5 PWAR1-201ENST00000624188 2414 ntBASIC6.36□□□□□ -1.39
CDK5RAP3Q96JB5 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
CDK5RAP3Q96JB5 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC6.36□□□□□ -1.39
CDK5RAP3Q96JB5 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CDK5RAP3Q96JB5 AL121886.1-201ENST00000358609 435 ntBASIC6.36□□□□□ -1.39
CDK5RAP3Q96JB5 SNORA64.1-201ENST00000362600 132 ntBASIC6.36□□□□□ -1.39
CDK5RAP3Q96JB5 HMGB1P20-201ENST00000402555 677 ntBASIC6.36□□□□□ -1.39
CDK5RAP3Q96JB5 AC096921.1-201ENST00000411661 375 ntBASIC6.36□□□□□ -1.39
CDK5RAP3Q96JB5 IPPKP1-201ENST00000422501 768 ntBASIC6.36□□□□□ -1.39
CDK5RAP3Q96JB5 AC093084.1-201ENST00000424233 687 ntBASIC6.36□□□□□ -1.39
CDK5RAP3Q96JB5 VN1R42P-201ENST00000424651 344 ntBASIC6.36□□□□□ -1.39
CDK5RAP3Q96JB5 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC6.36□□□□□ -1.39
CDK5RAP3Q96JB5 RPS23P6-201ENST00000466136 431 ntBASIC6.36□□□□□ -1.39
CDK5RAP3Q96JB5 AC087672.1-201ENST00000479876 766 ntBASIC6.36□□□□□ -1.39
CDK5RAP3Q96JB5 OARD1-211ENST00000480585 829 ntTSL 3 BASIC6.36□□□□□ -1.39
CDK5RAP3Q96JB5 GLUD1P3-202ENST00000508551 200 ntBASIC6.36□□□□□ -1.39
CDK5RAP3Q96JB5 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC6.36□□□□□ -1.39
CDK5RAP3Q96JB5 GAPDHP62-201ENST00000515313 990 ntBASIC6.36□□□□□ -1.39
CDK5RAP3Q96JB5 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC6.36□□□□□ -1.39
CDK5RAP3Q96JB5 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC6.36□□□□□ -1.39
CDK5RAP3Q96JB5 AP003066.2-201ENST00000529375 555 ntBASIC6.36□□□□□ -1.39
CDK5RAP3Q96JB5 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC6.36□□□□□ -1.39
CDK5RAP3Q96JB5 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC6.36□□□□□ -1.39
CDK5RAP3Q96JB5 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC6.36□□□□□ -1.39
CDK5RAP3Q96JB5 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC6.36□□□□□ -1.39
CDK5RAP3Q96JB5 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC6.36□□□□□ -1.39
CDK5RAP3Q96JB5 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC6.36□□□□□ -1.39
CDK5RAP3Q96JB5 EIF1P5-201ENST00000585002 234 ntBASIC6.36□□□□□ -1.39
CDK5RAP3Q96JB5 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC6.36□□□□□ -1.39
CDK5RAP3Q96JB5 AC100767.2-201ENST00000604840 693 ntBASIC6.36□□□□□ -1.39
CDK5RAP3Q96JB5 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC6.36□□□□□ -1.39
CDK5RAP3Q96JB5 AP000770.2-201ENST00000623694 100 ntBASIC6.36□□□□□ -1.39
CDK5RAP3Q96JB5 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
CDK5RAP3Q96JB5 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC6.36□□□□□ -1.39
CDK5RAP3Q96JB5 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
CDK5RAP3Q96JB5 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
CDK5RAP3Q96JB5 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
CDK5RAP3Q96JB5 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC6.36□□□□□ -1.39
CDK5RAP3Q96JB5 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
CDK5RAP3Q96JB5 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms