Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.65□□□□□ -1.67
CCDC58Q4VC31 AC009704.2-201ENST00000618739 483 ntBASIC4.65□□□□□ -1.67
CCDC58Q4VC31 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC4.65□□□□□ -1.67
CCDC58Q4VC31 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC4.65□□□□□ -1.67
CCDC58Q4VC31 5S_rRNA.28-201ENST00000638107 119 ntBASIC4.65□□□□□ -1.67
CCDC58Q4VC31 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
CCDC58Q4VC31 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.67
CCDC58Q4VC31 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.65□□□□□ -1.67
CCDC58Q4VC31 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CCDC58Q4VC31 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.65□□□□□ -1.67
CCDC58Q4VC31 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CCDC58Q4VC31 AC091046.3-201ENST00000631455 1574 ntBASIC4.65□□□□□ -1.67
CCDC58Q4VC31 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CCDC58Q4VC31 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CCDC58Q4VC31 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
CCDC58Q4VC31 AC068254.2-201ENST00000623938 3577 ntBASIC4.64□□□□□ -1.67
CCDC58Q4VC31 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.64□□□□□ -1.67
CCDC58Q4VC31 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.64□□□□□ -1.67
CCDC58Q4VC31 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC58Q4VC31 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC58Q4VC31 RNA5SP28-201ENST00000363841 119 ntBASIC4.64□□□□□ -1.67
CCDC58Q4VC31 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC4.64□□□□□ -1.67
CCDC58Q4VC31 RNU1-74P-201ENST00000384108 171 ntBASIC4.64□□□□□ -1.67
CCDC58Q4VC31 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC58Q4VC31 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.64□□□□□ -1.67
CCDC58Q4VC31 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC4.64□□□□□ -1.67
CCDC58Q4VC31 SRSF1P1-201ENST00000424058 520 ntBASIC4.64□□□□□ -1.67
CCDC58Q4VC31 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.64□□□□□ -1.67
CCDC58Q4VC31 GSTM5P1-201ENST00000434751 660 ntBASIC4.64□□□□□ -1.67
CCDC58Q4VC31 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.64□□□□□ -1.67
CCDC58Q4VC31 MRPL35P2-201ENST00000448009 511 ntBASIC4.64□□□□□ -1.67
CCDC58Q4VC31 BTF3P6-201ENST00000448054 499 ntBASIC4.64□□□□□ -1.67
CCDC58Q4VC31 MTND6P5-201ENST00000448266 512 ntBASIC4.64□□□□□ -1.67
CCDC58Q4VC31 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC4.64□□□□□ -1.67
CCDC58Q4VC31 AC058823.1-201ENST00000485315 474 ntBASIC4.64□□□□□ -1.67
CCDC58Q4VC31 RN7SL612P-201ENST00000497704 295 ntBASIC4.64□□□□□ -1.67
CCDC58Q4VC31 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC4.64□□□□□ -1.67
CCDC58Q4VC31 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC4.64□□□□□ -1.67
CCDC58Q4VC31 AC006427.1-201ENST00000514359 712 ntBASIC4.64□□□□□ -1.67
CCDC58Q4VC31 SNORA43.3-201ENST00000517240 103 ntBASIC4.64□□□□□ -1.67
CCDC58Q4VC31 AC060775.1-201ENST00000518241 520 ntBASIC4.64□□□□□ -1.67
CCDC58Q4VC31 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC4.64□□□□□ -1.67
CCDC58Q4VC31 CASP1P2-201ENST00000526830 1258 ntBASIC4.64□□□□□ -1.67
CCDC58Q4VC31 AP004607.2-201ENST00000533949 322 ntBASIC4.64□□□□□ -1.67
CCDC58Q4VC31 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC4.64□□□□□ -1.67
CCDC58Q4VC31 AC006512.2-201ENST00000543250 486 ntBASIC4.64□□□□□ -1.67
CCDC58Q4VC31 AC008126.1-201ENST00000549019 480 ntBASIC4.64□□□□□ -1.67
CCDC58Q4VC31 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.64□□□□□ -1.67
CCDC58Q4VC31 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.64□□□□□ -1.67
CCDC58Q4VC31 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC4.64□□□□□ -1.67
CCDC58Q4VC31 SNORD91B-202ENST00000608459 222 ntBASIC4.64□□□□□ -1.67
CCDC58Q4VC31 HTR1DP1-201ENST00000616500 888 ntBASIC4.64□□□□□ -1.67
CCDC58Q4VC31 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.64□□□□□ -1.67
CCDC58Q4VC31 AC067931.1-201ENST00000624190 671 ntBASIC4.64□□□□□ -1.67
CCDC58Q4VC31 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC58Q4VC31 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
CCDC58Q4VC31 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC58Q4VC31 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
CCDC58Q4VC31 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
CCDC58Q4VC31 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.64□□□□□ -1.67
CCDC58Q4VC31 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC58Q4VC31 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.64□□□□□ -1.67
CCDC58Q4VC31 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
CCDC58Q4VC31 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC58Q4VC31 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.64□□□□□ -1.67
CCDC58Q4VC31 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
CCDC58Q4VC31 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC58Q4VC31 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.64□□□□□ -1.67
CCDC58Q4VC31 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC58Q4VC31 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
CCDC58Q4VC31 MTND5P12-201ENST00000502851 1449 ntBASIC4.63□□□□□ -1.67
CCDC58Q4VC31 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC58Q4VC31 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.63□□□□□ -1.67
CCDC58Q4VC31 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
CCDC58Q4VC31 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC4.63□□□□□ -1.67
CCDC58Q4VC31 AC004386.1-201ENST00000393214 761 ntBASIC4.63□□□□□ -1.67
CCDC58Q4VC31 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
CCDC58Q4VC31 MIR1275-201ENST00000408770 80 ntBASIC4.63□□□□□ -1.67
CCDC58Q4VC31 RN7SKP16-201ENST00000410180 299 ntBASIC4.63□□□□□ -1.67
CCDC58Q4VC31 AL132671.1-201ENST00000415736 308 ntTSL 3 BASIC4.63□□□□□ -1.67
CCDC58Q4VC31 Z93019.1-201ENST00000416450 973 ntBASIC4.63□□□□□ -1.67
CCDC58Q4VC31 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.63□□□□□ -1.67
CCDC58Q4VC31 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC4.63□□□□□ -1.67
CCDC58Q4VC31 CLUHP1-201ENST00000435012 1190 ntBASIC4.63□□□□□ -1.67
CCDC58Q4VC31 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC58Q4VC31 AC105399.1-202ENST00000447303 205 ntBASIC4.63□□□□□ -1.67
CCDC58Q4VC31 EEF1B2P3-201ENST00000447718 678 ntBASIC4.63□□□□□ -1.67
CCDC58Q4VC31 AC073073.1-201ENST00000493920 463 ntBASIC4.63□□□□□ -1.67
CCDC58Q4VC31 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC4.63□□□□□ -1.67
CCDC58Q4VC31 AC114781.3-201ENST00000512083 142 ntBASIC4.63□□□□□ -1.67
CCDC58Q4VC31 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC4.63□□□□□ -1.67
CCDC58Q4VC31 AC068305.2-201ENST00000550567 1205 ntBASIC4.63□□□□□ -1.67
CCDC58Q4VC31 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC58Q4VC31 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC58Q4VC31 uc_338.18-201ENST00000615451 175 ntBASIC4.63□□□□□ -1.67
CCDC58Q4VC31 MTCO1P1-201ENST00000624263 1081 ntBASIC4.63□□□□□ -1.67
CCDC58Q4VC31 AC007683.2-201ENST00000624681 714 ntBASIC4.63□□□□□ -1.67
CCDC58Q4VC31 AC129915.3-201ENST00000634128 948 ntBASIC4.63□□□□□ -1.67
CCDC58Q4VC31 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
CCDC58Q4VC31 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms