Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
HMGCS1Q01581 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
HMGCS1Q01581 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
HMGCS1Q01581 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
HMGCS1Q01581 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HMGCS1Q01581 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC4.95□□□□□ -1.62
HMGCS1Q01581 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC4.95□□□□□ -1.62
HMGCS1Q01581 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.95□□□□□ -1.62
HMGCS1Q01581 AC069307.1-201ENST00000602820 447 ntBASIC4.95□□□□□ -1.62
HMGCS1Q01581 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.95□□□□□ -1.62
HMGCS1Q01581 AP005131.7-201ENST00000610087 611 ntBASIC4.95□□□□□ -1.62
HMGCS1Q01581 MIR6837-201ENST00000620884 64 ntBASIC4.95□□□□□ -1.62
HMGCS1Q01581 AC136428.4-201ENST00000634254 1155 ntBASIC4.95□□□□□ -1.62
HMGCS1Q01581 CASC19-264ENST00000641912 1184 ntBASIC4.95□□□□□ -1.62
HMGCS1Q01581 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HMGCS1Q01581 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HMGCS1Q01581 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.95□□□□□ -1.62
HMGCS1Q01581 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC4.95□□□□□ -1.62
HMGCS1Q01581 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HMGCS1Q01581 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HMGCS1Q01581 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HMGCS1Q01581 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC4.95□□□□□ -1.62
HMGCS1Q01581 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC4.95□□□□□ -1.62
HMGCS1Q01581 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
HMGCS1Q01581 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
HMGCS1Q01581 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.94□□□□□ -1.62
HMGCS1Q01581 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.94□□□□□ -1.62
HMGCS1Q01581 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.94□□□□□ -1.62
HMGCS1Q01581 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HMGCS1Q01581 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HMGCS1Q01581 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HMGCS1Q01581 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HMGCS1Q01581 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.94□□□□□ -1.62
HMGCS1Q01581 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
HMGCS1Q01581 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HMGCS1Q01581 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HMGCS1Q01581 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
HMGCS1Q01581 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC4.94□□□□□ -1.62
HMGCS1Q01581 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
HMGCS1Q01581 SNORA67-201ENST00000384423 137 ntBASIC4.94□□□□□ -1.62
HMGCS1Q01581 RN7SKP229-201ENST00000410465 302 ntBASIC4.94□□□□□ -1.62
HMGCS1Q01581 AC211486.3-201ENST00000412694 621 ntBASIC4.94□□□□□ -1.62
HMGCS1Q01581 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC4.94□□□□□ -1.62
HMGCS1Q01581 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC4.94□□□□□ -1.62
HMGCS1Q01581 RPL7L1P9-201ENST00000431298 745 ntBASIC4.94□□□□□ -1.62
HMGCS1Q01581 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.94□□□□□ -1.62
HMGCS1Q01581 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC4.94□□□□□ -1.62
HMGCS1Q01581 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.94□□□□□ -1.62
HMGCS1Q01581 Z92846.1-201ENST00000456203 268 ntBASIC4.94□□□□□ -1.62
HMGCS1Q01581 AC011225.1-201ENST00000457751 369 ntBASIC4.94□□□□□ -1.62
HMGCS1Q01581 AC091180.1-201ENST00000462104 372 ntBASIC4.94□□□□□ -1.62
HMGCS1Q01581 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HMGCS1Q01581 AC005412.2-201ENST00000492004 341 ntBASIC4.94□□□□□ -1.62
HMGCS1Q01581 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.94□□□□□ -1.62
HMGCS1Q01581 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
HMGCS1Q01581 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HMGCS1Q01581 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.94□□□□□ -1.62
HMGCS1Q01581 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC4.94□□□□□ -1.62
HMGCS1Q01581 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC4.94□□□□□ -1.62
HMGCS1Q01581 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.94□□□□□ -1.62
HMGCS1Q01581 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.94□□□□□ -1.62
HMGCS1Q01581 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC4.94□□□□□ -1.62
HMGCS1Q01581 METTL15-211ENST00000634762 718 ntTSL 5 BASIC4.94□□□□□ -1.62
HMGCS1Q01581 AC135068.12-201ENST00000637370 931 ntBASIC4.94□□□□□ -1.62
HMGCS1Q01581 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
HMGCS1Q01581 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
HMGCS1Q01581 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
HMGCS1Q01581 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
HMGCS1Q01581 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HMGCS1Q01581 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
HMGCS1Q01581 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.94□□□□□ -1.62
HMGCS1Q01581 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
HMGCS1Q01581 CA1-225ENST00000626824 2405 ntTSL 5 BASIC4.94□□□□□ -1.62
HMGCS1Q01581 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
HMGCS1Q01581 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
HMGCS1Q01581 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
HMGCS1Q01581 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.93□□□□□ -1.62
HMGCS1Q01581 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC4.93□□□□□ -1.62
HMGCS1Q01581 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
HMGCS1Q01581 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
HMGCS1Q01581 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
HMGCS1Q01581 DDX18P6-201ENST00000450119 1997 ntBASIC4.93□□□□□ -1.62
HMGCS1Q01581 AC104333.2-201ENST00000422630 192 ntBASIC4.93□□□□□ -1.62
HMGCS1Q01581 RPS4XP16-201ENST00000427198 791 ntBASIC4.93□□□□□ -1.62
HMGCS1Q01581 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC4.93□□□□□ -1.62
HMGCS1Q01581 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.93□□□□□ -1.62
HMGCS1Q01581 RNU7-157P-201ENST00000459600 66 ntBASIC4.93□□□□□ -1.62
HMGCS1Q01581 OR2AO1P-201ENST00000476497 403 ntBASIC4.93□□□□□ -1.62
HMGCS1Q01581 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HMGCS1Q01581 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.93□□□□□ -1.62
HMGCS1Q01581 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.93□□□□□ -1.62
HMGCS1Q01581 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HMGCS1Q01581 MIR4489-201ENST00000578869 62 ntBASIC4.93□□□□□ -1.62
HMGCS1Q01581 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.93□□□□□ -1.62
HMGCS1Q01581 IMMP1LP3-201ENST00000604197 224 ntBASIC4.93□□□□□ -1.62
HMGCS1Q01581 AC018695.5-201ENST00000605872 315 ntBASIC4.93□□□□□ -1.62
HMGCS1Q01581 AP005432.2-201ENST00000608162 586 ntBASIC4.93□□□□□ -1.62
HMGCS1Q01581 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.93□□□□□ -1.62
HMGCS1Q01581 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.93□□□□□ -1.62
HMGCS1Q01581 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms