Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.91□□□□□ -1.62
LIM2P55344 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC4.91□□□□□ -1.62
LIM2P55344 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
LIM2P55344 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
LIM2P55344 SNORA17.1-201ENST00000362945 126 ntBASIC4.91□□□□□ -1.62
LIM2P55344 RNA5SP223-201ENST00000365174 120 ntBASIC4.91□□□□□ -1.62
LIM2P55344 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
LIM2P55344 MARK2P12-201ENST00000420129 585 ntBASIC4.91□□□□□ -1.62
LIM2P55344 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC4.91□□□□□ -1.62
LIM2P55344 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.91□□□□□ -1.62
LIM2P55344 CNOT7P2-201ENST00000441051 832 ntBASIC4.91□□□□□ -1.62
LIM2P55344 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.91□□□□□ -1.62
LIM2P55344 TCEA1P3-201ENST00000443005 880 ntBASIC4.91□□□□□ -1.62
LIM2P55344 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.91□□□□□ -1.62
LIM2P55344 AC018638.3-201ENST00000461273 132 ntBASIC4.91□□□□□ -1.62
LIM2P55344 AC104849.1-201ENST00000462623 405 ntBASIC4.91□□□□□ -1.62
LIM2P55344 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
LIM2P55344 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
LIM2P55344 NIFKP7-201ENST00000503365 834 ntBASIC4.91□□□□□ -1.62
LIM2P55344 HIGD1AP14-201ENST00000507617 282 ntBASIC4.91□□□□□ -1.62
LIM2P55344 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC4.91□□□□□ -1.62
LIM2P55344 SNORA70.11-201ENST00000515987 138 ntBASIC4.91□□□□□ -1.62
LIM2P55344 SNORA70.13-201ENST00000516116 138 ntBASIC4.91□□□□□ -1.62
LIM2P55344 AC008676.3-201ENST00000521237 435 ntBASIC4.91□□□□□ -1.62
LIM2P55344 KCTD9P6-201ENST00000522306 950 ntBASIC4.91□□□□□ -1.62
LIM2P55344 OR4A46P-201ENST00000527255 933 ntBASIC4.91□□□□□ -1.62
LIM2P55344 AC090022.1-201ENST00000546569 311 ntBASIC4.91□□□□□ -1.62
LIM2P55344 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.91□□□□□ -1.62
LIM2P55344 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC4.91□□□□□ -1.62
LIM2P55344 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC4.91□□□□□ -1.62
LIM2P55344 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC4.91□□□□□ -1.62
LIM2P55344 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.91□□□□□ -1.62
LIM2P55344 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.91□□□□□ -1.62
LIM2P55344 AC241377.1-201ENST00000619797 406 ntBASIC4.91□□□□□ -1.62
LIM2P55344 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
LIM2P55344 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC4.91□□□□□ -1.62
LIM2P55344 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
LIM2P55344 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.91□□□□□ -1.62
LIM2P55344 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC4.91□□□□□ -1.62
LIM2P55344 AC114947.2-201ENST00000565748 2125 ntBASIC4.91□□□□□ -1.62
LIM2P55344 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
LIM2P55344 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.91□□□□□ -1.62
LIM2P55344 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.91□□□□□ -1.62
LIM2P55344 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
LIM2P55344 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
LIM2P55344 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.62
LIM2P55344 AL022311.1-201ENST00000623726 19416 ntBASIC4.9□□□□□ -1.62
LIM2P55344 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.9□□□□□ -1.62
LIM2P55344 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
LIM2P55344 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
LIM2P55344 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.9□□□□□ -1.62
LIM2P55344 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
LIM2P55344 AL513548.1-201ENST00000562904 1724 ntBASIC4.9□□□□□ -1.62
LIM2P55344 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC4.9□□□□□ -1.62
LIM2P55344 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
LIM2P55344 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
LIM2P55344 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
LIM2P55344 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
LIM2P55344 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
LIM2P55344 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.9□□□□□ -1.63
LIM2P55344 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC4.9□□□□□ -1.63
LIM2P55344 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.9□□□□□ -1.63
LIM2P55344 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.9□□□□□ -1.63
LIM2P55344 AL139148.1-201ENST00000427122 680 ntBASIC4.9□□□□□ -1.63
LIM2P55344 BX842559.2-201ENST00000451418 605 ntBASIC4.9□□□□□ -1.63
LIM2P55344 AL389915.2-201ENST00000454576 441 ntBASIC4.9□□□□□ -1.63
LIM2P55344 RN7SL222P-201ENST00000476452 299 ntBASIC4.9□□□□□ -1.63
LIM2P55344 TRBV8-1-201ENST00000481590 279 ntBASIC4.9□□□□□ -1.63
LIM2P55344 MORF4L2P1-201ENST00000503761 858 ntBASIC4.9□□□□□ -1.63
LIM2P55344 AC138409.2-202ENST00000507274 458 ntBASIC4.9□□□□□ -1.63
LIM2P55344 AC113398.2-201ENST00000507630 558 ntBASIC4.9□□□□□ -1.63
LIM2P55344 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC4.9□□□□□ -1.63
LIM2P55344 SNORD116-30-201ENST00000516468 85 ntBASIC4.9□□□□□ -1.63
LIM2P55344 RNA5SP34-201ENST00000516887 130 ntBASIC4.9□□□□□ -1.63
LIM2P55344 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.63
LIM2P55344 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.9□□□□□ -1.63
LIM2P55344 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC4.9□□□□□ -1.63
LIM2P55344 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC4.9□□□□□ -1.63
LIM2P55344 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC4.9□□□□□ -1.63
LIM2P55344 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.9□□□□□ -1.63
LIM2P55344 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC4.9□□□□□ -1.63
LIM2P55344 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.63
LIM2P55344 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.9□□□□□ -1.63
LIM2P55344 SNORA35B-201ENST00000607417 129 ntBASIC4.9□□□□□ -1.63
LIM2P55344 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC4.9□□□□□ -1.63
LIM2P55344 AP000894.4-201ENST00000610185 483 ntBASIC4.9□□□□□ -1.63
LIM2P55344 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
LIM2P55344 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.9□□□□□ -1.63
LIM2P55344 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.9□□□□□ -1.63
LIM2P55344 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC4.9□□□□□ -1.63
LIM2P55344 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.63
LIM2P55344 AL590763.1-201ENST00000398297 1545 ntBASIC4.9□□□□□ -1.63
LIM2P55344 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC4.9□□□□□ -1.63
LIM2P55344 PANDAR-201ENST00000629595 1506 ntBASIC4.9□□□□□ -1.63
LIM2P55344 AC112255.1-201ENST00000624070 2493 ntBASIC4.9□□□□□ -1.63
LIM2P55344 OR9K1P-202ENST00000641111 3217 ntBASIC4.9□□□□□ -1.63
LIM2P55344 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
LIM2P55344 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.9□□□□□ -1.63
LIM2P55344 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
LIM2P55344 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms