Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
VCPP55072 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
VCPP55072 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
VCPP55072 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.79□□□□□ -1.48
VCPP55072 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
VCPP55072 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.79□□□□□ -1.48
VCPP55072 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
VCPP55072 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC5.79□□□□□ -1.48
VCPP55072 RNU4-4P-201ENST00000364588 130 ntBASIC5.79□□□□□ -1.48
VCPP55072 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.79□□□□□ -1.48
VCPP55072 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.79□□□□□ -1.48
VCPP55072 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.79□□□□□ -1.48
VCPP55072 RIMKLBP2-201ENST00000424737 654 ntBASIC5.79□□□□□ -1.48
VCPP55072 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC5.79□□□□□ -1.48
VCPP55072 RN7SL385P-201ENST00000468873 276 ntBASIC5.79□□□□□ -1.48
VCPP55072 RN7SL188P-201ENST00000469842 285 ntBASIC5.79□□□□□ -1.48
VCPP55072 RN7SL481P-201ENST00000477764 299 ntBASIC5.79□□□□□ -1.48
VCPP55072 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.79□□□□□ -1.48
VCPP55072 OR2A3P-201ENST00000493774 953 ntBASIC5.79□□□□□ -1.48
VCPP55072 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.79□□□□□ -1.48
VCPP55072 SNRPCP2-201ENST00000504370 475 ntBASIC5.79□□□□□ -1.48
VCPP55072 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.79□□□□□ -1.48
VCPP55072 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.79□□□□□ -1.48
VCPP55072 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.79□□□□□ -1.48
VCPP55072 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC5.79□□□□□ -1.48
VCPP55072 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.79□□□□□ -1.48
VCPP55072 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.79□□□□□ -1.48
VCPP55072 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.79□□□□□ -1.48
VCPP55072 AC010487.1-201ENST00000594408 1172 ntBASIC5.79□□□□□ -1.48
VCPP55072 AC009237.13-201ENST00000603193 276 ntBASIC5.79□□□□□ -1.48
VCPP55072 AL451049.1-201ENST00000608672 497 ntBASIC5.79□□□□□ -1.48
VCPP55072 AC010632.3-201ENST00000611377 369 ntBASIC5.79□□□□□ -1.48
VCPP55072 AL162574.1-201ENST00000615702 950 ntBASIC5.79□□□□□ -1.48
VCPP55072 AL118522.2-201ENST00000616045 615 ntBASIC5.79□□□□□ -1.48
VCPP55072 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.79□□□□□ -1.48
VCPP55072 MIR7641-1-201ENST00000627518 61 ntBASIC5.79□□□□□ -1.48
VCPP55072 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
VCPP55072 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.79□□□□□ -1.48
VCPP55072 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
VCPP55072 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
VCPP55072 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.79□□□□□ -1.48
VCPP55072 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
VCPP55072 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
VCPP55072 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
VCPP55072 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.79□□□□□ -1.48
VCPP55072 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
VCPP55072 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
VCPP55072 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.78□□□□□ -1.48
VCPP55072 AL929601.4-201ENST00000613011 1341 ntBASIC5.78□□□□□ -1.48
VCPP55072 AL022311.1-201ENST00000623726 19416 ntBASIC5.78□□□□□ -1.48
VCPP55072 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.78□□□□□ -1.48
VCPP55072 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.78□□□□□ -1.48
VCPP55072 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.78□□□□□ -1.48
VCPP55072 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.78□□□□□ -1.48
VCPP55072 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
VCPP55072 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.78□□□□□ -1.48
VCPP55072 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
VCPP55072 RNA5SP335-201ENST00000363817 110 ntBASIC5.78□□□□□ -1.48
VCPP55072 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
VCPP55072 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.78□□□□□ -1.48
VCPP55072 GPS2P1-201ENST00000411761 986 ntBASIC5.78□□□□□ -1.48
VCPP55072 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.78□□□□□ -1.48
VCPP55072 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.78□□□□□ -1.48
VCPP55072 OR6D1P-201ENST00000436165 939 ntBASIC5.78□□□□□ -1.48
VCPP55072 AC073465.2-201ENST00000440938 498 ntBASIC5.78□□□□□ -1.48
VCPP55072 RPL5P25-201ENST00000441148 775 ntBASIC5.78□□□□□ -1.48
VCPP55072 ABCC13-202ENST00000463099 3842 ntBASIC5.78□□□□□ -1.48
VCPP55072 RN7SL817P-201ENST00000480777 288 ntBASIC5.78□□□□□ -1.48
VCPP55072 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.78□□□□□ -1.48
VCPP55072 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
VCPP55072 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.78□□□□□ -1.48
VCPP55072 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.78□□□□□ -1.48
VCPP55072 OR4A43P-201ENST00000532938 908 ntBASIC5.78□□□□□ -1.48
VCPP55072 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.78□□□□□ -1.48
VCPP55072 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.78□□□□□ -1.48
VCPP55072 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
VCPP55072 AL023583.1-201ENST00000607518 1143 ntBASIC5.78□□□□□ -1.48
VCPP55072 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.78□□□□□ -1.48
VCPP55072 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
VCPP55072 AL353662.3-201ENST00000625131 237 ntBASIC5.78□□□□□ -1.48
VCPP55072 CASC19-281ENST00000642118 1554 ntBASIC5.78□□□□□ -1.48
VCPP55072 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
VCPP55072 AC133552.1-201ENST00000569988 4007 ntBASIC5.78□□□□□ -1.48
VCPP55072 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
VCPP55072 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
VCPP55072 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.78□□□□□ -1.48
VCPP55072 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.78□□□□□ -1.48
VCPP55072 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
VCPP55072 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
VCPP55072 AC093909.5-201ENST00000621839 1799 ntBASIC5.78□□□□□ -1.48
VCPP55072 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
VCPP55072 AC144833.1-201ENST00000567953 4089 ntBASIC5.77□□□□□ -1.49
VCPP55072 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
VCPP55072 AL359715.3-201ENST00000569267 2123 ntBASIC5.77□□□□□ -1.49
VCPP55072 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
VCPP55072 RNU6-249P-201ENST00000363016 102 ntBASIC5.77□□□□□ -1.49
VCPP55072 RNU1-43P-201ENST00000365052 165 ntBASIC5.77□□□□□ -1.49
VCPP55072 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
VCPP55072 AC007068.1-201ENST00000396690 844 ntBASIC5.77□□□□□ -1.49
VCPP55072 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 122.1 ms