Protein–RNA interactions for Protein: P08F94

PKHD1, Fibrocystin, humanhuman

Predictions only

Length 4,074 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKHD1P08F94 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.1□□□□□ -1.91
PKHD1P08F94 RPS12P10-201ENST00000427031 377 ntBASIC3.1□□□□□ -1.91
PKHD1P08F94 RPS29P17-201ENST00000430795 166 ntBASIC3.1□□□□□ -1.91
PKHD1P08F94 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC3.1□□□□□ -1.91
PKHD1P08F94 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.1□□□□□ -1.91
PKHD1P08F94 AC084783.1-201ENST00000565846 910 ntBASIC3.1□□□□□ -1.91
PKHD1P08F94 EP400NL-208ENST00000475841 7090 ntTSL 2 BASIC3.1□□□□□ -1.91
PKHD1P08F94 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PKHD1P08F94 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
PKHD1P08F94 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC3.1□□□□□ -1.91
PKHD1P08F94 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
PKHD1P08F94 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
PKHD1P08F94 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
PKHD1P08F94 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC3.1□□□□□ -1.91
PKHD1P08F94 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC3.1□□□□□ -1.91
PKHD1P08F94 SETBP1-201ENST00000282030 9899 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
PKHD1P08F94 OR5P1P-201ENST00000299512 925 ntBASIC3.1□□□□□ -1.91
PKHD1P08F94 OR1L6-202ENST00000373684 1044 ntBASIC3.1□□□□□ -1.91
PKHD1P08F94 RPL11P3-201ENST00000395256 523 ntBASIC3.1□□□□□ -1.91
PKHD1P08F94 AURKA-208ENST00000395915 2114 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PKHD1P08F94 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PKHD1P08F94 SNORA11.1-201ENST00000408133 129 ntBASIC3.1□□□□□ -1.91
PKHD1P08F94 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC3.1□□□□□ -1.91
PKHD1P08F94 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC3.1□□□□□ -1.91
PKHD1P08F94 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.1□□□□□ -1.91
PKHD1P08F94 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
PKHD1P08F94 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PKHD1P08F94 KCNMA1-248ENST00000638991 11990 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
PKHD1P08F94 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC3.1□□□□□ -1.91
PKHD1P08F94 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC3.1□□□□□ -1.91
PKHD1P08F94 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
PKHD1P08F94 ARHGEF7-203ENST00000375723 4957 ntTSL 5 BASIC3.1□□□□□ -1.91
PKHD1P08F94 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PKHD1P08F94 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
PKHD1P08F94 SCN11A-201ENST00000302328 6500 ntAPPRIS P2 TSL 5 BASIC3.1□□□□□ -1.91
PKHD1P08F94 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PKHD1P08F94 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC3.1□□□□□ -1.91
PKHD1P08F94 AC025031.4-201ENST00000621248 3271 ntBASIC3.1□□□□□ -1.91
PKHD1P08F94 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
PKHD1P08F94 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC3.09□□□□□ -1.91
PKHD1P08F94 RPL23AP26-201ENST00000412728 464 ntBASIC3.09□□□□□ -1.91
PKHD1P08F94 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC3.09□□□□□ -1.91
PKHD1P08F94 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC3.09□□□□□ -1.91
PKHD1P08F94 UQCRHP4-201ENST00000471686 272 ntBASIC3.09□□□□□ -1.91
PKHD1P08F94 TPT1P3-201ENST00000492841 512 ntBASIC3.09□□□□□ -1.91
PKHD1P08F94 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC3.09□□□□□ -1.91
PKHD1P08F94 CCNG2P1-201ENST00000549521 1000 ntBASIC3.09□□□□□ -1.91
PKHD1P08F94 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC3.09□□□□□ -1.91
PKHD1P08F94 AP001357.1-201ENST00000586304 1053 ntBASIC3.09□□□□□ -1.91
PKHD1P08F94 AC010632.3-201ENST00000611377 369 ntBASIC3.09□□□□□ -1.91
PKHD1P08F94 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
PKHD1P08F94 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC3.09□□□□□ -1.91
PKHD1P08F94 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
PKHD1P08F94 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
PKHD1P08F94 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
PKHD1P08F94 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
PKHD1P08F94 SALL4P2-201ENST00000423288 2910 ntBASIC3.09□□□□□ -1.91
PKHD1P08F94 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC3.09□□□□□ -1.91
PKHD1P08F94 AL592182.3-201ENST00000642132 3304 ntBASIC3.09□□□□□ -1.91
PKHD1P08F94 AC079097.1-201ENST00000512187 1399 ntBASIC3.09□□□□□ -1.91
PKHD1P08F94 RAB27B-201ENST00000262094 7281 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
PKHD1P08F94 THADA-206ENST00000405006 6310 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
PKHD1P08F94 F5-202ENST00000367797 7024 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
PKHD1P08F94 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
PKHD1P08F94 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC3.09□□□□□ -1.91
PKHD1P08F94 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC3.09□□□□□ -1.91
PKHD1P08F94 AC108475.1-201ENST00000507880 950 ntBASIC3.09□□□□□ -1.91
PKHD1P08F94 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC3.09□□□□□ -1.91
PKHD1P08F94 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC3.09□□□□□ -1.91
PKHD1P08F94 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC3.09□□□□□ -1.91
PKHD1P08F94 AC087499.8-201ENST00000578406 226 ntBASIC3.09□□□□□ -1.91
PKHD1P08F94 AF131215.7-201ENST00000602443 707 ntBASIC3.09□□□□□ -1.91
PKHD1P08F94 AL133338.2-201ENST00000604292 736 ntBASIC3.09□□□□□ -1.91
PKHD1P08F94 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC3.09□□□□□ -1.91
PKHD1P08F94 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
PKHD1P08F94 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
PKHD1P08F94 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
PKHD1P08F94 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC3.09□□□□□ -1.91
PKHD1P08F94 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
PKHD1P08F94 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC3.09□□□□□ -1.91
PKHD1P08F94 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
PKHD1P08F94 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC3.09□□□□□ -1.91
PKHD1P08F94 ZNF518A-201ENST00000316045 7277 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
PKHD1P08F94 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
PKHD1P08F94 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC3.09□□□□□ -1.92
PKHD1P08F94 GNG5P2-201ENST00000372054 207 ntBASIC3.09□□□□□ -1.92
PKHD1P08F94 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.09□□□□□ -1.92
PKHD1P08F94 SCP2-206ENST00000430330 938 ntTSL 2 BASIC3.09□□□□□ -1.92
PKHD1P08F94 RPL19P16-201ENST00000433839 588 ntBASIC3.09□□□□□ -1.92
PKHD1P08F94 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.09□□□□□ -1.92
PKHD1P08F94 RN7SL339P-201ENST00000580597 296 ntBASIC3.09□□□□□ -1.92
PKHD1P08F94 AL049794.2-201ENST00000616301 365 ntBASIC3.09□□□□□ -1.92
PKHD1P08F94 AC004777.1-201ENST00000624317 287 ntBASIC3.09□□□□□ -1.92
PKHD1P08F94 RNF123-214ENST00000629802 207 ntTSL 5 BASIC3.09□□□□□ -1.92
PKHD1P08F94 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
PKHD1P08F94 NAV2-213ENST00000533917 5084 ntTSL 2 BASIC3.09□□□□□ -1.92
PKHD1P08F94 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.92
PKHD1P08F94 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
PKHD1P08F94 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.92
PKHD1P08F94 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms