Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.04□□□□□ -1.6
CLDN9O95484 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CLDN9O95484 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CLDN9O95484 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.03□□□□□ -1.6
CLDN9O95484 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CLDN9O95484 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLDN9O95484 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
CLDN9O95484 MTCO1P11-201ENST00000429111 1528 ntBASIC5.03□□□□□ -1.6
CLDN9O95484 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
CLDN9O95484 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLDN9O95484 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLDN9O95484 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLDN9O95484 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.03□□□□□ -1.6
CLDN9O95484 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLDN9O95484 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.03□□□□□ -1.6
CLDN9O95484 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLDN9O95484 AL390316.1-201ENST00000406279 553 ntBASIC5.03□□□□□ -1.6
CLDN9O95484 RN7SKP229-201ENST00000410465 302 ntBASIC5.03□□□□□ -1.6
CLDN9O95484 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.03□□□□□ -1.6
CLDN9O95484 AL513325.1-201ENST00000417716 1034 ntBASIC5.03□□□□□ -1.6
CLDN9O95484 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.03□□□□□ -1.6
CLDN9O95484 AC079355.1-201ENST00000421770 223 ntBASIC5.03□□□□□ -1.6
CLDN9O95484 CHEK2P5-201ENST00000423877 246 ntBASIC5.03□□□□□ -1.6
CLDN9O95484 AC093655.2-201ENST00000425735 631 ntBASIC5.03□□□□□ -1.6
CLDN9O95484 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.03□□□□□ -1.6
CLDN9O95484 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.03□□□□□ -1.6
CLDN9O95484 MTCO3P17-201ENST00000443775 513 ntBASIC5.03□□□□□ -1.6
CLDN9O95484 AC023141.9-201ENST00000458734 412 ntBASIC5.03□□□□□ -1.6
CLDN9O95484 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CLDN9O95484 RPL7P6-201ENST00000480903 738 ntBASIC5.03□□□□□ -1.6
CLDN9O95484 RN7SL184P-201ENST00000488308 297 ntBASIC5.03□□□□□ -1.6
CLDN9O95484 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.03□□□□□ -1.6
CLDN9O95484 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.03□□□□□ -1.6
CLDN9O95484 SCARNA21.2-201ENST00000516600 166 ntBASIC5.03□□□□□ -1.6
CLDN9O95484 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
CLDN9O95484 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.03□□□□□ -1.6
CLDN9O95484 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CLDN9O95484 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CLDN9O95484 AC020978.7-201ENST00000575953 1187 ntBASIC5.03□□□□□ -1.6
CLDN9O95484 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.03□□□□□ -1.6
CLDN9O95484 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.03□□□□□ -1.6
CLDN9O95484 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.03□□□□□ -1.6
CLDN9O95484 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.03□□□□□ -1.6
CLDN9O95484 AC135068.12-201ENST00000637370 931 ntBASIC5.03□□□□□ -1.6
CLDN9O95484 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLDN9O95484 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLDN9O95484 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.03□□□□□ -1.6
CLDN9O95484 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CLDN9O95484 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLDN9O95484 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.03□□□□□ -1.6
CLDN9O95484 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CLDN9O95484 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.03□□□□□ -1.6
CLDN9O95484 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.03□□□□□ -1.6
CLDN9O95484 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.03□□□□□ -1.6
CLDN9O95484 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
CLDN9O95484 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
CLDN9O95484 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
CLDN9O95484 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
CLDN9O95484 HSPA8P14-201ENST00000552265 1805 ntBASIC5.02□□□□□ -1.61
CLDN9O95484 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
CLDN9O95484 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.02□□□□□ -1.61
CLDN9O95484 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
CLDN9O95484 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
CLDN9O95484 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CLDN9O95484 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
CLDN9O95484 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CLDN9O95484 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CLDN9O95484 U3.3-201ENST00000362986 216 ntBASIC5.02□□□□□ -1.61
CLDN9O95484 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC5.02□□□□□ -1.61
CLDN9O95484 AC098592.2-201ENST00000413158 265 ntBASIC5.02□□□□□ -1.61
CLDN9O95484 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.02□□□□□ -1.61
CLDN9O95484 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.02□□□□□ -1.61
CLDN9O95484 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC5.02□□□□□ -1.61
CLDN9O95484 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.02□□□□□ -1.61
CLDN9O95484 HMGN2P27-201ENST00000427352 270 ntBASIC5.02□□□□□ -1.61
CLDN9O95484 TCEA1P3-201ENST00000443005 880 ntBASIC5.02□□□□□ -1.61
CLDN9O95484 AC007386.1-201ENST00000455212 582 ntBASIC5.02□□□□□ -1.61
CLDN9O95484 AC110749.1-201ENST00000462007 357 ntBASIC5.02□□□□□ -1.61
CLDN9O95484 RPS4XP20-201ENST00000505751 772 ntBASIC5.02□□□□□ -1.61
CLDN9O95484 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC5.02□□□□□ -1.61
CLDN9O95484 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.02□□□□□ -1.61
CLDN9O95484 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC5.02□□□□□ -1.61
CLDN9O95484 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.02□□□□□ -1.61
CLDN9O95484 AC027026.1-201ENST00000532323 742 ntBASIC5.02□□□□□ -1.61
CLDN9O95484 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.02□□□□□ -1.61
CLDN9O95484 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.02□□□□□ -1.61
CLDN9O95484 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.02□□□□□ -1.61
CLDN9O95484 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.02□□□□□ -1.61
CLDN9O95484 AC011445.2-201ENST00000599274 173 ntBASIC5.02□□□□□ -1.61
CLDN9O95484 AC067838.1-201ENST00000606064 577 ntBASIC5.02□□□□□ -1.61
CLDN9O95484 AL359513.1-201ENST00000614364 557 ntBASIC5.02□□□□□ -1.61
CLDN9O95484 AC007204.2-201ENST00000615022 616 ntBASIC5.02□□□□□ -1.61
CLDN9O95484 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.02□□□□□ -1.61
CLDN9O95484 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.02□□□□□ -1.61
CLDN9O95484 CYP4F35P-202ENST00000636121 390 ntBASIC5.02□□□□□ -1.61
CLDN9O95484 AC073869.7-201ENST00000640874 297 ntBASIC5.02□□□□□ -1.61
CLDN9O95484 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CLDN9O95484 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.02□□□□□ -1.61
CLDN9O95484 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.02□□□□□ -1.61
CLDN9O95484 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms