Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SHOX2O60902 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
SHOX2O60902 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
SHOX2O60902 RNA5SP28-201ENST00000363841 119 ntBASIC5.17□□□□□ -1.58
SHOX2O60902 MIR551A-201ENST00000385042 96 ntBASIC5.17□□□□□ -1.58
SHOX2O60902 RNA5SP372-201ENST00000390836 115 ntBASIC5.17□□□□□ -1.58
SHOX2O60902 OR7E156P-201ENST00000400303 464 ntBASIC5.17□□□□□ -1.58
SHOX2O60902 RPS24P12-201ENST00000402084 394 ntBASIC5.17□□□□□ -1.58
SHOX2O60902 AC009237.10-201ENST00000414112 510 ntBASIC5.17□□□□□ -1.58
SHOX2O60902 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC5.17□□□□□ -1.58
SHOX2O60902 AK4P4-201ENST00000419465 646 ntBASIC5.17□□□□□ -1.58
SHOX2O60902 AL022331.1-201ENST00000429025 477 ntBASIC5.17□□□□□ -1.58
SHOX2O60902 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.17□□□□□ -1.58
SHOX2O60902 RPS27P18-201ENST00000431701 247 ntBASIC5.17□□□□□ -1.58
SHOX2O60902 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.17□□□□□ -1.58
SHOX2O60902 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC5.17□□□□□ -1.58
SHOX2O60902 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.17□□□□□ -1.58
SHOX2O60902 AL672138.1-201ENST00000450604 1015 ntBASIC5.17□□□□□ -1.58
SHOX2O60902 AC093166.2-201ENST00000455969 1017 ntBASIC5.17□□□□□ -1.58
SHOX2O60902 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.17□□□□□ -1.58
SHOX2O60902 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC5.17□□□□□ -1.58
SHOX2O60902 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.17□□□□□ -1.58
SHOX2O60902 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC5.17□□□□□ -1.58
SHOX2O60902 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.17□□□□□ -1.58
SHOX2O60902 STMN1P2-201ENST00000508435 439 ntBASIC5.17□□□□□ -1.58
SHOX2O60902 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.17□□□□□ -1.58
SHOX2O60902 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.17□□□□□ -1.58
SHOX2O60902 AC074087.1-201ENST00000512059 724 ntBASIC5.17□□□□□ -1.58
SHOX2O60902 OR5H7P-201ENST00000514084 930 ntBASIC5.17□□□□□ -1.58
SHOX2O60902 RNU6-1334P-201ENST00000516032 105 ntBASIC5.17□□□□□ -1.58
SHOX2O60902 Y_RNA.667-201ENST00000516212 107 ntBASIC5.17□□□□□ -1.58
SHOX2O60902 SCARNA18.1-201ENST00000516330 83 ntBASIC5.17□□□□□ -1.58
SHOX2O60902 AP004607.2-201ENST00000533949 322 ntBASIC5.17□□□□□ -1.58
SHOX2O60902 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.17□□□□□ -1.58
SHOX2O60902 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.17□□□□□ -1.58
SHOX2O60902 GSTP1P1-201ENST00000548078 319 ntBASIC5.17□□□□□ -1.58
SHOX2O60902 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.17□□□□□ -1.58
SHOX2O60902 CYCSP38-201ENST00000559840 322 ntBASIC5.17□□□□□ -1.58
SHOX2O60902 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.17□□□□□ -1.58
SHOX2O60902 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.17□□□□□ -1.58
SHOX2O60902 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
SHOX2O60902 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.17□□□□□ -1.58
SHOX2O60902 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.17□□□□□ -1.58
SHOX2O60902 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.17□□□□□ -1.58
SHOX2O60902 AC118658.2-201ENST00000618697 459 ntBASIC5.17□□□□□ -1.58
SHOX2O60902 AP001052.1-201ENST00000626421 99 ntBASIC5.17□□□□□ -1.58
SHOX2O60902 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.17□□□□□ -1.58
SHOX2O60902 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SHOX2O60902 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC5.17□□□□□ -1.58
SHOX2O60902 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.17□□□□□ -1.58
SHOX2O60902 MTCO1P11-201ENST00000429111 1528 ntBASIC5.17□□□□□ -1.58
SHOX2O60902 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SHOX2O60902 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.17□□□□□ -1.58
SHOX2O60902 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
SHOX2O60902 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SHOX2O60902 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
SHOX2O60902 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SHOX2O60902 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
SHOX2O60902 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.16□□□□□ -1.58
SHOX2O60902 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SHOX2O60902 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC5.16□□□□□ -1.58
SHOX2O60902 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SHOX2O60902 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.16□□□□□ -1.58
SHOX2O60902 RNU1-83P-201ENST00000363426 164 ntBASIC5.16□□□□□ -1.58
SHOX2O60902 RN7SKP6-201ENST00000364795 319 ntBASIC5.16□□□□□ -1.58
SHOX2O60902 RNA5SP131-201ENST00000365452 119 ntBASIC5.16□□□□□ -1.58
SHOX2O60902 MIR195-201ENST00000385194 87 ntBASIC5.16□□□□□ -1.58
SHOX2O60902 SEPT7P8-201ENST00000413308 775 ntBASIC5.16□□□□□ -1.58
SHOX2O60902 RPL21P108-201ENST00000413857 481 ntBASIC5.16□□□□□ -1.58
SHOX2O60902 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC5.16□□□□□ -1.58
SHOX2O60902 COX6CP13-201ENST00000428703 226 ntBASIC5.16□□□□□ -1.58
SHOX2O60902 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC5.16□□□□□ -1.58
SHOX2O60902 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.16□□□□□ -1.58
SHOX2O60902 AL161722.1-201ENST00000446972 1032 ntBASIC5.16□□□□□ -1.58
SHOX2O60902 RPS6P2-201ENST00000454208 705 ntBASIC5.16□□□□□ -1.58
SHOX2O60902 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.16□□□□□ -1.58
SHOX2O60902 AC068228.1-201ENST00000461723 211 ntBASIC5.16□□□□□ -1.58
SHOX2O60902 MRE11P1-201ENST00000464884 2127 ntBASIC5.16□□□□□ -1.58
SHOX2O60902 AC087672.1-201ENST00000479876 766 ntBASIC5.16□□□□□ -1.58
SHOX2O60902 AC104109.1-201ENST00000498563 436 ntBASIC5.16□□□□□ -1.58
SHOX2O60902 AC097173.1-201ENST00000505862 819 ntBASIC5.16□□□□□ -1.58
SHOX2O60902 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.16□□□□□ -1.58
SHOX2O60902 MRPS16P1-201ENST00000523462 412 ntBASIC5.16□□□□□ -1.58
SHOX2O60902 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.16□□□□□ -1.58
SHOX2O60902 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SHOX2O60902 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SHOX2O60902 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.16□□□□□ -1.58
SHOX2O60902 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.16□□□□□ -1.58
SHOX2O60902 AP001437.1-201ENST00000608783 456 ntBASIC5.16□□□□□ -1.58
SHOX2O60902 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.16□□□□□ -1.58
SHOX2O60902 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.16□□□□□ -1.58
SHOX2O60902 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.16□□□□□ -1.58
SHOX2O60902 PANDAR-201ENST00000629595 1506 ntBASIC5.16□□□□□ -1.58
SHOX2O60902 OR5AQ1P-202ENST00000641257 1534 ntBASIC5.16□□□□□ -1.58
SHOX2O60902 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.16□□□□□ -1.58
SHOX2O60902 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SHOX2O60902 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SHOX2O60902 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
SHOX2O60902 AC005332.5-201ENST00000591222 2919 ntBASIC5.16□□□□□ -1.58
SHOX2O60902 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms