Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC6.08□□□□□ -1.44
HERC6Q8IVU3 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC6.08□□□□□ -1.44
HERC6Q8IVU3 AC006116.3-201ENST00000592968 361 ntBASIC6.08□□□□□ -1.44
HERC6Q8IVU3 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC6.08□□□□□ -1.44
HERC6Q8IVU3 MTCO2P22-201ENST00000603246 681 ntBASIC6.08□□□□□ -1.44
HERC6Q8IVU3 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC6.08□□□□□ -1.44
HERC6Q8IVU3 AL450270.1-201ENST00000606160 391 ntBASIC6.08□□□□□ -1.44
HERC6Q8IVU3 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC6.08□□□□□ -1.44
HERC6Q8IVU3 AC092159.4-201ENST00000624944 550 ntBASIC6.08□□□□□ -1.44
HERC6Q8IVU3 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HERC6Q8IVU3 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.08□□□□□ -1.44
HERC6Q8IVU3 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
HERC6Q8IVU3 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.08□□□□□ -1.44
HERC6Q8IVU3 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.08□□□□□ -1.44
HERC6Q8IVU3 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.08□□□□□ -1.44
HERC6Q8IVU3 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
HERC6Q8IVU3 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HERC6Q8IVU3 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HERC6Q8IVU3 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
HERC6Q8IVU3 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HERC6Q8IVU3 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.08□□□□□ -1.44
HERC6Q8IVU3 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
HERC6Q8IVU3 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
HERC6Q8IVU3 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC6.08□□□□□ -1.44
HERC6Q8IVU3 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HERC6Q8IVU3 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
HERC6Q8IVU3 CDC27P2-201ENST00000425026 1922 ntBASIC6.07□□□□□ -1.44
HERC6Q8IVU3 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
HERC6Q8IVU3 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HERC6Q8IVU3 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HERC6Q8IVU3 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.07□□□□□ -1.44
HERC6Q8IVU3 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.07□□□□□ -1.44
HERC6Q8IVU3 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HERC6Q8IVU3 FBXL21-201ENST00000297158 1305 ntBASIC6.07□□□□□ -1.44
HERC6Q8IVU3 RAD1P1-201ENST00000231383 813 ntBASIC6.07□□□□□ -1.44
HERC6Q8IVU3 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HERC6Q8IVU3 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
HERC6Q8IVU3 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
HERC6Q8IVU3 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC6.07□□□□□ -1.44
HERC6Q8IVU3 AC093084.1-201ENST00000424233 687 ntBASIC6.07□□□□□ -1.44
HERC6Q8IVU3 AC092651.1-201ENST00000426110 312 ntBASIC6.07□□□□□ -1.44
HERC6Q8IVU3 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC6.07□□□□□ -1.44
HERC6Q8IVU3 PA2G4P6-201ENST00000438325 1197 ntBASIC6.07□□□□□ -1.44
HERC6Q8IVU3 AL389915.2-201ENST00000454576 441 ntBASIC6.07□□□□□ -1.44
HERC6Q8IVU3 AC004129.2-201ENST00000457229 287 ntBASIC6.07□□□□□ -1.44
HERC6Q8IVU3 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC6.07□□□□□ -1.44
HERC6Q8IVU3 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC6.07□□□□□ -1.44
HERC6Q8IVU3 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC6.07□□□□□ -1.44
HERC6Q8IVU3 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC6.07□□□□□ -1.44
HERC6Q8IVU3 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
HERC6Q8IVU3 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC6.07□□□□□ -1.44
HERC6Q8IVU3 CLMN-206ENST00000556441 452 ntTSL 5 BASIC6.07□□□□□ -1.44
HERC6Q8IVU3 AL049779.3-201ENST00000557141 606 ntBASIC6.07□□□□□ -1.44
HERC6Q8IVU3 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC6.07□□□□□ -1.44
HERC6Q8IVU3 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC6.07□□□□□ -1.44
HERC6Q8IVU3 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC6.07□□□□□ -1.44
HERC6Q8IVU3 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC6.07□□□□□ -1.44
HERC6Q8IVU3 TAS2R6P-201ENST00000605022 826 ntBASIC6.07□□□□□ -1.44
HERC6Q8IVU3 AL158211.2-201ENST00000607282 395 ntBASIC6.07□□□□□ -1.44
HERC6Q8IVU3 AL445528.2-201ENST00000620582 470 ntBASIC6.07□□□□□ -1.44
HERC6Q8IVU3 MIR6810-201ENST00000622701 70 ntBASIC6.07□□□□□ -1.44
HERC6Q8IVU3 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC6.07□□□□□ -1.44
HERC6Q8IVU3 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.07□□□□□ -1.44
HERC6Q8IVU3 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HERC6Q8IVU3 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HERC6Q8IVU3 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HERC6Q8IVU3 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
HERC6Q8IVU3 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
HERC6Q8IVU3 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
HERC6Q8IVU3 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC6.07□□□□□ -1.44
HERC6Q8IVU3 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.07□□□□□ -1.44
HERC6Q8IVU3 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.07□□□□□ -1.44
HERC6Q8IVU3 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HERC6Q8IVU3 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
HERC6Q8IVU3 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
HERC6Q8IVU3 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HERC6Q8IVU3 AC011493.1-201ENST00000596753 1632 ntBASIC6.07□□□□□ -1.44
HERC6Q8IVU3 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
HERC6Q8IVU3 AC018628.1-201ENST00000624147 3819 ntBASIC6.06□□□□□ -1.44
HERC6Q8IVU3 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HERC6Q8IVU3 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
HERC6Q8IVU3 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.06□□□□□ -1.44
HERC6Q8IVU3 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC6.06□□□□□ -1.44
HERC6Q8IVU3 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
HERC6Q8IVU3 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC6.06□□□□□ -1.44
HERC6Q8IVU3 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC6.06□□□□□ -1.44
HERC6Q8IVU3 AL807761.1-201ENST00000417622 171 ntBASIC6.06□□□□□ -1.44
HERC6Q8IVU3 FAM96AP1-201ENST00000430879 482 ntBASIC6.06□□□□□ -1.44
HERC6Q8IVU3 AL390879.1-201ENST00000439143 386 ntBASIC6.06□□□□□ -1.44
HERC6Q8IVU3 XKRY2-201ENST00000442362 1093 ntBASIC6.06□□□□□ -1.44
HERC6Q8IVU3 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC6.06□□□□□ -1.44
HERC6Q8IVU3 RPL21P133-201ENST00000443666 476 ntBASIC6.06□□□□□ -1.44
HERC6Q8IVU3 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC6.06□□□□□ -1.44
HERC6Q8IVU3 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC6.06□□□□□ -1.44
HERC6Q8IVU3 RPS23P2-201ENST00000463671 415 ntBASIC6.06□□□□□ -1.44
HERC6Q8IVU3 BX284632.1-201ENST00000478218 541 ntBASIC6.06□□□□□ -1.44
HERC6Q8IVU3 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC6.06□□□□□ -1.44
HERC6Q8IVU3 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC6.06□□□□□ -1.44
HERC6Q8IVU3 AC010468.3-201ENST00000508225 458 ntBASIC6.06□□□□□ -1.44
HERC6Q8IVU3 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms