Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.25□□□□□ -1.73
SSBP1Q04837 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.25□□□□□ -1.73
SSBP1Q04837 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC4.25□□□□□ -1.73
SSBP1Q04837 RPS29P9-201ENST00000440360 171 ntBASIC4.25□□□□□ -1.73
SSBP1Q04837 AL445665.1-202ENST00000452436 324 ntBASIC4.25□□□□□ -1.73
SSBP1Q04837 AL691482.1-201ENST00000453255 87 ntBASIC4.25□□□□□ -1.73
SSBP1Q04837 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.25□□□□□ -1.73
SSBP1Q04837 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.25□□□□□ -1.73
SSBP1Q04837 AP000942.1-201ENST00000463969 747 ntBASIC4.25□□□□□ -1.73
SSBP1Q04837 RN7SL799P-201ENST00000475891 298 ntBASIC4.25□□□□□ -1.73
SSBP1Q04837 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.25□□□□□ -1.73
SSBP1Q04837 RPL21P6-201ENST00000479171 504 ntBASIC4.25□□□□□ -1.73
SSBP1Q04837 AC104971.1-201ENST00000495117 578 ntBASIC4.25□□□□□ -1.73
SSBP1Q04837 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC4.25□□□□□ -1.73
SSBP1Q04837 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.25□□□□□ -1.73
SSBP1Q04837 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC4.25□□□□□ -1.73
SSBP1Q04837 OR51A1P-201ENST00000511110 946 ntBASIC4.25□□□□□ -1.73
SSBP1Q04837 AC114781.3-201ENST00000512083 142 ntBASIC4.25□□□□□ -1.73
SSBP1Q04837 AC060775.1-201ENST00000518241 520 ntBASIC4.25□□□□□ -1.73
SSBP1Q04837 AC027369.2-201ENST00000528030 440 ntBASIC4.25□□□□□ -1.73
SSBP1Q04837 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SSBP1Q04837 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC4.25□□□□□ -1.73
SSBP1Q04837 AP001157.1-201ENST00000550837 2339 ntBASIC4.25□□□□□ -1.73
SSBP1Q04837 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.25□□□□□ -1.73
SSBP1Q04837 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.25□□□□□ -1.73
SSBP1Q04837 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC4.25□□□□□ -1.73
SSBP1Q04837 AL512413.1-201ENST00000606489 382 ntBASIC4.25□□□□□ -1.73
SSBP1Q04837 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC4.25□□□□□ -1.73
SSBP1Q04837 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC4.25□□□□□ -1.73
SSBP1Q04837 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.25□□□□□ -1.73
SSBP1Q04837 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC4.25□□□□□ -1.73
SSBP1Q04837 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SSBP1Q04837 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
SSBP1Q04837 AC026523.2-201ENST00000625039 7739 ntBASIC4.25□□□□□ -1.73
SSBP1Q04837 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
SSBP1Q04837 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
SSBP1Q04837 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
SSBP1Q04837 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
SSBP1Q04837 AC108751.5-201ENST00000492880 1336 ntBASIC4.24□□□□□ -1.73
SSBP1Q04837 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.24□□□□□ -1.73
SSBP1Q04837 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
SSBP1Q04837 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.24□□□□□ -1.73
SSBP1Q04837 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SSBP1Q04837 RNA5SP46-201ENST00000362370 120 ntBASIC4.24□□□□□ -1.73
SSBP1Q04837 MIR191-201ENST00000384873 92 ntBASIC4.24□□□□□ -1.73
SSBP1Q04837 OR4K12P-201ENST00000406538 961 ntBASIC4.24□□□□□ -1.73
SSBP1Q04837 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.24□□□□□ -1.73
SSBP1Q04837 CYCSP10-201ENST00000417973 294 ntBASIC4.24□□□□□ -1.73
SSBP1Q04837 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC4.24□□□□□ -1.73
SSBP1Q04837 RPS4XP16-201ENST00000427198 791 ntBASIC4.24□□□□□ -1.73
SSBP1Q04837 FMO7P-201ENST00000436045 768 ntBASIC4.24□□□□□ -1.73
SSBP1Q04837 AC118758.1-202ENST00000454719 225 ntBASIC4.24□□□□□ -1.73
SSBP1Q04837 HMGB1P4-201ENST00000455362 567 ntBASIC4.24□□□□□ -1.73
SSBP1Q04837 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC4.24□□□□□ -1.73
SSBP1Q04837 RN7SL41P-201ENST00000476144 297 ntBASIC4.24□□□□□ -1.73
SSBP1Q04837 AC074087.1-201ENST00000512059 724 ntBASIC4.24□□□□□ -1.73
SSBP1Q04837 AC134698.5-201ENST00000519444 336 ntBASIC4.24□□□□□ -1.73
SSBP1Q04837 AP003033.2-201ENST00000528901 805 ntBASIC4.24□□□□□ -1.73
SSBP1Q04837 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC4.24□□□□□ -1.73
SSBP1Q04837 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
SSBP1Q04837 GNG2-208ENST00000554875 430 ntTSL 5 BASIC4.24□□□□□ -1.73
SSBP1Q04837 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC4.24□□□□□ -1.73
SSBP1Q04837 AC023389.2-201ENST00000580031 955 ntBASIC4.24□□□□□ -1.73
SSBP1Q04837 AC005828.7-201ENST00000607331 556 ntBASIC4.24□□□□□ -1.73
SSBP1Q04837 AC000068.2-201ENST00000608816 460 ntBASIC4.24□□□□□ -1.73
SSBP1Q04837 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.24□□□□□ -1.73
SSBP1Q04837 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC4.24□□□□□ -1.73
SSBP1Q04837 AC006453.5-201ENST00000636451 619 ntBASIC4.24□□□□□ -1.73
SSBP1Q04837 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SSBP1Q04837 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.24□□□□□ -1.73
SSBP1Q04837 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.24□□□□□ -1.73
SSBP1Q04837 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SSBP1Q04837 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.24□□□□□ -1.73
SSBP1Q04837 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SSBP1Q04837 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.23□□□□□ -1.73
SSBP1Q04837 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC4.23□□□□□ -1.73
SSBP1Q04837 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SSBP1Q04837 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
SSBP1Q04837 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SSBP1Q04837 EOGT-210ENST00000615922 1931 ntBASIC4.23□□□□□ -1.73
SSBP1Q04837 AC009643.2-201ENST00000603543 1448 ntBASIC4.23□□□□□ -1.73
SSBP1Q04837 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SSBP1Q04837 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
SSBP1Q04837 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SSBP1Q04837 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.23□□□□□ -1.73
SSBP1Q04837 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.23□□□□□ -1.73
SSBP1Q04837 LINC01355-201ENST00000566551 5444 ntBASIC4.23□□□□□ -1.73
SSBP1Q04837 AC083843.2-201ENST00000568248 6253 ntBASIC4.23□□□□□ -1.73
SSBP1Q04837 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SSBP1Q04837 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC4.23□□□□□ -1.73
SSBP1Q04837 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SSBP1Q04837 MIR195-201ENST00000385194 87 ntBASIC4.23□□□□□ -1.73
SSBP1Q04837 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
SSBP1Q04837 MIR921-201ENST00000401133 56 ntBASIC4.23□□□□□ -1.73
SSBP1Q04837 MIR1182-201ENST00000408363 97 ntBASIC4.23□□□□□ -1.73
SSBP1Q04837 AL596448.1-201ENST00000415024 392 ntBASIC4.23□□□□□ -1.73
SSBP1Q04837 AC093155.2-201ENST00000420734 937 ntBASIC4.23□□□□□ -1.73
SSBP1Q04837 AL358176.3-201ENST00000420757 454 ntBASIC4.23□□□□□ -1.73
SSBP1Q04837 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.23□□□□□ -1.73
SSBP1Q04837 AMYP1-201ENST00000440059 1023 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms