Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.1□□□□□ -1.59
CLDN6P56747 PCNPP1-201ENST00000552501 511 ntBASIC5.1□□□□□ -1.59
CLDN6P56747 AC063949.1-201ENST00000552900 865 ntBASIC5.1□□□□□ -1.59
CLDN6P56747 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
CLDN6P56747 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
CLDN6P56747 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CLDN6P56747 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CLDN6P56747 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.1□□□□□ -1.59
CLDN6P56747 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.1□□□□□ -1.59
CLDN6P56747 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.1□□□□□ -1.59
CLDN6P56747 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.1□□□□□ -1.59
CLDN6P56747 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.1□□□□□ -1.59
CLDN6P56747 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
CLDN6P56747 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CLDN6P56747 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CLDN6P56747 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.09□□□□□ -1.59
CLDN6P56747 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.09□□□□□ -1.59
CLDN6P56747 AC018628.1-201ENST00000624147 3819 ntBASIC5.09□□□□□ -1.59
CLDN6P56747 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
CLDN6P56747 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CLDN6P56747 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CLDN6P56747 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CLDN6P56747 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CLDN6P56747 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
CLDN6P56747 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC5.09□□□□□ -1.59
CLDN6P56747 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
CLDN6P56747 AC010132.2-201ENST00000295493 1043 ntBASIC5.09□□□□□ -1.59
CLDN6P56747 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.09□□□□□ -1.59
CLDN6P56747 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
CLDN6P56747 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CLDN6P56747 RN7SKP95-201ENST00000362860 303 ntBASIC5.09□□□□□ -1.59
CLDN6P56747 HSPA8P15-201ENST00000401676 786 ntBASIC5.09□□□□□ -1.59
CLDN6P56747 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CLDN6P56747 MGAT2P2-201ENST00000427194 797 ntBASIC5.09□□□□□ -1.59
CLDN6P56747 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.09□□□□□ -1.59
CLDN6P56747 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
CLDN6P56747 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.09□□□□□ -1.59
CLDN6P56747 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC5.09□□□□□ -1.59
CLDN6P56747 AC073072.2-201ENST00000447425 348 ntBASIC5.09□□□□□ -1.59
CLDN6P56747 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.09□□□□□ -1.59
CLDN6P56747 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.09□□□□□ -1.59
CLDN6P56747 NDUFA5P9-201ENST00000472609 340 ntBASIC5.09□□□□□ -1.59
CLDN6P56747 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CLDN6P56747 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.09□□□□□ -1.59
CLDN6P56747 AC021006.3-201ENST00000530771 192 ntBASIC5.09□□□□□ -1.59
CLDN6P56747 OR5AM1P-201ENST00000532136 1032 ntBASIC5.09□□□□□ -1.59
CLDN6P56747 OR5AN2P-201ENST00000534535 896 ntBASIC5.09□□□□□ -1.59
CLDN6P56747 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.09□□□□□ -1.59
CLDN6P56747 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.09□□□□□ -1.59
CLDN6P56747 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.09□□□□□ -1.59
CLDN6P56747 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.09□□□□□ -1.59
CLDN6P56747 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.09□□□□□ -1.59
CLDN6P56747 AC005084.1-201ENST00000605160 304 ntBASIC5.09□□□□□ -1.59
CLDN6P56747 AL161616.1-201ENST00000611867 286 ntBASIC5.09□□□□□ -1.59
CLDN6P56747 AL627230.1-201ENST00000613077 211 ntBASIC5.09□□□□□ -1.59
CLDN6P56747 AL591926.8-201ENST00000616876 211 ntBASIC5.09□□□□□ -1.59
CLDN6P56747 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.09□□□□□ -1.59
CLDN6P56747 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CLDN6P56747 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
CLDN6P56747 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.09□□□□□ -1.59
CLDN6P56747 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
CLDN6P56747 AC114774.1-201ENST00000507410 1770 ntBASIC5.09□□□□□ -1.6
CLDN6P56747 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
CLDN6P56747 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
CLDN6P56747 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
CLDN6P56747 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CLDN6P56747 TET1P1-201ENST00000426627 2301 ntBASIC5.08□□□□□ -1.6
CLDN6P56747 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
CLDN6P56747 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.08□□□□□ -1.6
CLDN6P56747 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CLDN6P56747 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
CLDN6P56747 RNU1-32P-201ENST00000363937 159 ntBASIC5.08□□□□□ -1.6
CLDN6P56747 CBX1P3-201ENST00000413296 527 ntBASIC5.08□□□□□ -1.6
CLDN6P56747 AC245028.1-201ENST00000423259 256 ntBASIC5.08□□□□□ -1.6
CLDN6P56747 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.08□□□□□ -1.6
CLDN6P56747 RPL34P20-201ENST00000442771 351 ntBASIC5.08□□□□□ -1.6
CLDN6P56747 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.08□□□□□ -1.6
CLDN6P56747 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.08□□□□□ -1.6
CLDN6P56747 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC5.08□□□□□ -1.6
CLDN6P56747 NDUFAF4P3-201ENST00000456468 525 ntBASIC5.08□□□□□ -1.6
CLDN6P56747 AC096741.1-201ENST00000472250 846 ntBASIC5.08□□□□□ -1.6
CLDN6P56747 RN7SL481P-201ENST00000477764 299 ntBASIC5.08□□□□□ -1.6
CLDN6P56747 AC093720.1-201ENST00000505681 714 ntBASIC5.08□□□□□ -1.6
CLDN6P56747 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC5.08□□□□□ -1.6
CLDN6P56747 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC5.08□□□□□ -1.6
CLDN6P56747 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CLDN6P56747 OR8Q1P-201ENST00000526467 655 ntBASIC5.08□□□□□ -1.6
CLDN6P56747 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.08□□□□□ -1.6
CLDN6P56747 AC009117.1-201ENST00000563948 554 ntBASIC5.08□□□□□ -1.6
CLDN6P56747 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.08□□□□□ -1.6
CLDN6P56747 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.08□□□□□ -1.6
CLDN6P56747 AC009597.2-201ENST00000604659 592 ntBASIC5.08□□□□□ -1.6
CLDN6P56747 RNA5SP439-201ENST00000617595 124 ntBASIC5.08□□□□□ -1.6
CLDN6P56747 AC010435.1-201ENST00000623353 1177 ntBASIC5.08□□□□□ -1.6
CLDN6P56747 MIR7641-1-201ENST00000627518 61 ntBASIC5.08□□□□□ -1.6
CLDN6P56747 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.08□□□□□ -1.6
CLDN6P56747 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
CLDN6P56747 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.08□□□□□ -1.6
CLDN6P56747 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CLDN6P56747 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms