Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CASP4P49662 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CASP4P49662 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CASP4P49662 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5.61□□□□□ -1.51
CASP4P49662 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.61□□□□□ -1.51
CASP4P49662 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CASP4P49662 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CASP4P49662 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
CASP4P49662 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CASP4P49662 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CASP4P49662 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.6□□□□□ -1.51
CASP4P49662 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CASP4P49662 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.6□□□□□ -1.51
CASP4P49662 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CASP4P49662 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CASP4P49662 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.6□□□□□ -1.51
CASP4P49662 RPL23P2-201ENST00000320371 421 ntBASIC5.6□□□□□ -1.51
CASP4P49662 U3.7-201ENST00000363668 216 ntBASIC5.6□□□□□ -1.51
CASP4P49662 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CASP4P49662 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CASP4P49662 AL035079.1-201ENST00000405210 287 ntBASIC5.6□□□□□ -1.51
CASP4P49662 RN7SKP273-201ENST00000411392 314 ntBASIC5.6□□□□□ -1.51
CASP4P49662 AP000534.2-201ENST00000412729 568 ntBASIC5.6□□□□□ -1.51
CASP4P49662 AL139148.1-201ENST00000427122 680 ntBASIC5.6□□□□□ -1.51
CASP4P49662 VTI1BP4-201ENST00000427516 527 ntBASIC5.6□□□□□ -1.51
CASP4P49662 AC092647.2-201ENST00000452998 253 ntBASIC5.6□□□□□ -1.51
CASP4P49662 AC018638.3-201ENST00000461273 132 ntBASIC5.6□□□□□ -1.51
CASP4P49662 RPS18P6-201ENST00000476880 458 ntBASIC5.6□□□□□ -1.51
CASP4P49662 RN7SL30P-201ENST00000488416 306 ntBASIC5.6□□□□□ -1.51
CASP4P49662 AC112184.1-201ENST00000505179 312 ntBASIC5.6□□□□□ -1.51
CASP4P49662 RNA5SP230-201ENST00000517039 122 ntBASIC5.6□□□□□ -1.51
CASP4P49662 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.6□□□□□ -1.51
CASP4P49662 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.6□□□□□ -1.51
CASP4P49662 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.6□□□□□ -1.51
CASP4P49662 SUMO2P15-201ENST00000604285 278 ntBASIC5.6□□□□□ -1.51
CASP4P49662 AL161912.3-201ENST00000605404 628 ntBASIC5.6□□□□□ -1.51
CASP4P49662 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.6□□□□□ -1.51
CASP4P49662 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
CASP4P49662 AC073869.7-201ENST00000640874 297 ntBASIC5.6□□□□□ -1.51
CASP4P49662 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CASP4P49662 AC093671.1-201ENST00000624981 2929 ntBASIC5.6□□□□□ -1.51
CASP4P49662 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CASP4P49662 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
CASP4P49662 AC063976.2-201ENST00000425667 3556 ntBASIC5.6□□□□□ -1.51
CASP4P49662 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.6□□□□□ -1.51
CASP4P49662 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.59□□□□□ -1.51
CASP4P49662 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
CASP4P49662 AC004158.1-201ENST00000564508 4319 ntBASIC5.59□□□□□ -1.51
CASP4P49662 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CASP4P49662 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CASP4P49662 CIR1P2-201ENST00000514821 1342 ntBASIC5.59□□□□□ -1.51
CASP4P49662 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CASP4P49662 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CASP4P49662 OR9K1P-201ENST00000326513 941 ntBASIC5.59□□□□□ -1.51
CASP4P49662 SNORA17.1-201ENST00000362945 126 ntBASIC5.59□□□□□ -1.51
CASP4P49662 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.59□□□□□ -1.51
CASP4P49662 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CASP4P49662 MIR223-201ENST00000385204 110 ntBASIC5.59□□□□□ -1.51
CASP4P49662 MIR323B-201ENST00000385269 82 ntBASIC5.59□□□□□ -1.51
CASP4P49662 AL050305.1-201ENST00000399993 1230 ntBASIC5.59□□□□□ -1.51
CASP4P49662 MIR1178-201ENST00000408396 91 ntBASIC5.59□□□□□ -1.51
CASP4P49662 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.59□□□□□ -1.51
CASP4P49662 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
CASP4P49662 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.59□□□□□ -1.51
CASP4P49662 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.59□□□□□ -1.51
CASP4P49662 AL389915.2-201ENST00000454576 441 ntBASIC5.59□□□□□ -1.51
CASP4P49662 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC5.59□□□□□ -1.51
CASP4P49662 AC021660.1-201ENST00000465006 554 ntBASIC5.59□□□□□ -1.51
CASP4P49662 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.59□□□□□ -1.51
CASP4P49662 AL049874.2-201ENST00000492636 288 ntBASIC5.59□□□□□ -1.51
CASP4P49662 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.59□□□□□ -1.51
CASP4P49662 RNA5SP34-201ENST00000516887 130 ntBASIC5.59□□□□□ -1.51
CASP4P49662 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.59□□□□□ -1.51
CASP4P49662 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.59□□□□□ -1.51
CASP4P49662 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.59□□□□□ -1.51
CASP4P49662 AC090022.1-201ENST00000546569 311 ntBASIC5.59□□□□□ -1.51
CASP4P49662 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CASP4P49662 AC004825.1-201ENST00000555068 586 ntBASIC5.59□□□□□ -1.51
CASP4P49662 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.59□□□□□ -1.51
CASP4P49662 AC095055.1-201ENST00000603472 1113 ntBASIC5.59□□□□□ -1.51
CASP4P49662 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.59□□□□□ -1.51
CASP4P49662 AC015660.5-201ENST00000623238 564 ntBASIC5.59□□□□□ -1.51
CASP4P49662 C4BPAP1-201ENST00000415474 1893 ntBASIC5.59□□□□□ -1.51
CASP4P49662 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
CASP4P49662 CDY11P-201ENST00000447168 1651 ntBASIC5.59□□□□□ -1.52
CASP4P49662 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CASP4P49662 AL031595.2-201ENST00000624215 19071 ntBASIC5.58□□□□□ -1.52
CASP4P49662 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.58□□□□□ -1.52
CASP4P49662 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CASP4P49662 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CASP4P49662 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
CASP4P49662 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CASP4P49662 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.58□□□□□ -1.52
CASP4P49662 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
CASP4P49662 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
CASP4P49662 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
CASP4P49662 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.58□□□□□ -1.52
CASP4P49662 AC005532.2-201ENST00000467154 373 ntBASIC5.58□□□□□ -1.52
CASP4P49662 RN7SL727P-201ENST00000482164 296 ntBASIC5.58□□□□□ -1.52
CASP4P49662 RN7SL629P-201ENST00000489622 285 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 124.4 ms