Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 AC079097.1-201ENST00000512187 1399 ntBASIC5.39□□□□□ -1.55
HNF4AP41235 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HNF4AP41235 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HNF4AP41235 HSPA8P14-201ENST00000552265 1805 ntBASIC5.39□□□□□ -1.55
HNF4AP41235 BX005019.1-201ENST00000561881 1810 ntBASIC5.39□□□□□ -1.55
HNF4AP41235 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.39□□□□□ -1.55
HNF4AP41235 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.39□□□□□ -1.55
HNF4AP41235 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HNF4AP41235 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
HNF4AP41235 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.38□□□□□ -1.55
HNF4AP41235 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.38□□□□□ -1.55
HNF4AP41235 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HNF4AP41235 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5.38□□□□□ -1.55
HNF4AP41235 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HNF4AP41235 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
HNF4AP41235 AL078621.3-201ENST00000623707 2042 ntBASIC5.38□□□□□ -1.55
HNF4AP41235 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.38□□□□□ -1.55
HNF4AP41235 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
HNF4AP41235 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HNF4AP41235 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HNF4AP41235 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
HNF4AP41235 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
HNF4AP41235 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
HNF4AP41235 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
HNF4AP41235 RNA5SP131-201ENST00000365452 119 ntBASIC5.38□□□□□ -1.55
HNF4AP41235 RNU2-50P-201ENST00000410494 143 ntBASIC5.38□□□□□ -1.55
HNF4AP41235 RPS26P13-201ENST00000419030 330 ntBASIC5.38□□□□□ -1.55
HNF4AP41235 MTND6P12-201ENST00000428247 522 ntBASIC5.38□□□□□ -1.55
HNF4AP41235 RPL7P56-201ENST00000429441 717 ntBASIC5.38□□□□□ -1.55
HNF4AP41235 AC064862.4-201ENST00000442180 334 ntBASIC5.38□□□□□ -1.55
HNF4AP41235 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.38□□□□□ -1.55
HNF4AP41235 RPL31P15-201ENST00000449770 338 ntBASIC5.38□□□□□ -1.55
HNF4AP41235 LRRC37A14P-201ENST00000452297 462 ntBASIC5.38□□□□□ -1.55
HNF4AP41235 YWHAEP1-201ENST00000453697 763 ntBASIC5.38□□□□□ -1.55
HNF4AP41235 AP000547.1-201ENST00000454360 617 ntBASIC5.38□□□□□ -1.55
HNF4AP41235 AZGP1P2-201ENST00000454506 345 ntBASIC5.38□□□□□ -1.55
HNF4AP41235 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HNF4AP41235 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HNF4AP41235 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.38□□□□□ -1.55
HNF4AP41235 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC5.38□□□□□ -1.55
HNF4AP41235 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC5.38□□□□□ -1.55
HNF4AP41235 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.38□□□□□ -1.55
HNF4AP41235 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.38□□□□□ -1.55
HNF4AP41235 OR10D4P-201ENST00000525892 951 ntBASIC5.38□□□□□ -1.55
HNF4AP41235 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.38□□□□□ -1.55
HNF4AP41235 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.38□□□□□ -1.55
HNF4AP41235 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC5.38□□□□□ -1.55
HNF4AP41235 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HNF4AP41235 MIR3908-201ENST00000579798 126 ntBASIC5.38□□□□□ -1.55
HNF4AP41235 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC5.38□□□□□ -1.55
HNF4AP41235 AP004372.1-201ENST00000604842 844 ntBASIC5.38□□□□□ -1.55
HNF4AP41235 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.38□□□□□ -1.55
HNF4AP41235 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.38□□□□□ -1.55
HNF4AP41235 AC084036.1-201ENST00000609190 508 ntBASIC5.38□□□□□ -1.55
HNF4AP41235 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.38□□□□□ -1.55
HNF4AP41235 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC5.38□□□□□ -1.55
HNF4AP41235 AC021766.1-201ENST00000624404 741 ntBASIC5.38□□□□□ -1.55
HNF4AP41235 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.38□□□□□ -1.55
HNF4AP41235 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HNF4AP41235 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HNF4AP41235 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HNF4AP41235 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
HNF4AP41235 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HNF4AP41235 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.38□□□□□ -1.55
HNF4AP41235 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.38□□□□□ -1.55
HNF4AP41235 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
HNF4AP41235 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HNF4AP41235 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HNF4AP41235 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.37□□□□□ -1.55
HNF4AP41235 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.37□□□□□ -1.55
HNF4AP41235 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.37□□□□□ -1.55
HNF4AP41235 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.37□□□□□ -1.55
HNF4AP41235 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.37□□□□□ -1.55
HNF4AP41235 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HNF4AP41235 AC010329.2-201ENST00000595195 2737 ntBASIC5.37□□□□□ -1.55
HNF4AP41235 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HNF4AP41235 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HNF4AP41235 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HNF4AP41235 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HNF4AP41235 RN7SKP292-201ENST00000365522 317 ntBASIC5.37□□□□□ -1.55
HNF4AP41235 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HNF4AP41235 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HNF4AP41235 RNU6-178P-201ENST00000384631 104 ntBASIC5.37□□□□□ -1.55
HNF4AP41235 SNORA68.2-201ENST00000391263 128 ntBASIC5.37□□□□□ -1.55
HNF4AP41235 AL031985.1-201ENST00000392713 418 ntBASIC5.37□□□□□ -1.55
HNF4AP41235 GAPDHP42-201ENST00000406848 981 ntBASIC5.37□□□□□ -1.55
HNF4AP41235 SNORA11.3-201ENST00000408471 128 ntBASIC5.37□□□□□ -1.55
HNF4AP41235 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.37□□□□□ -1.55
HNF4AP41235 AC007161.1-204ENST00000423039 460 ntBASIC5.37□□□□□ -1.55
HNF4AP41235 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.37□□□□□ -1.55
HNF4AP41235 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.37□□□□□ -1.55
HNF4AP41235 AL359265.1-201ENST00000440296 795 ntBASIC5.37□□□□□ -1.55
HNF4AP41235 AC073465.2-201ENST00000440938 498 ntBASIC5.37□□□□□ -1.55
HNF4AP41235 AC005297.1-201ENST00000444765 862 ntBASIC5.37□□□□□ -1.55
HNF4AP41235 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.37□□□□□ -1.55
HNF4AP41235 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.37□□□□□ -1.55
HNF4AP41235 AL358876.1-201ENST00000453364 1075 ntBASIC5.37□□□□□ -1.55
HNF4AP41235 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.37□□□□□ -1.55
HNF4AP41235 AC021146.7-201ENST00000509604 775 ntBASIC5.37□□□□□ -1.55
HNF4AP41235 MTATP6P1-201ENST00000514057 681 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms