Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.48□□□□□ -1.53
HOXA9P31269 MTND2P40-201ENST00000436718 841 ntBASIC5.48□□□□□ -1.53
HOXA9P31269 RPS29P10-201ENST00000439197 166 ntBASIC5.48□□□□□ -1.53
HOXA9P31269 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC5.48□□□□□ -1.53
HOXA9P31269 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.48□□□□□ -1.53
HOXA9P31269 RN7SL860P-201ENST00000473738 223 ntBASIC5.48□□□□□ -1.53
HOXA9P31269 RPL7P16-201ENST00000479738 738 ntBASIC5.48□□□□□ -1.53
HOXA9P31269 RPS24P16-201ENST00000497294 392 ntBASIC5.48□□□□□ -1.53
HOXA9P31269 GLUD1P3-202ENST00000508551 200 ntBASIC5.48□□□□□ -1.53
HOXA9P31269 AC006427.1-201ENST00000514359 712 ntBASIC5.48□□□□□ -1.53
HOXA9P31269 AC020937.1-201ENST00000519677 1013 ntBASIC5.48□□□□□ -1.53
HOXA9P31269 HIGD1AP5-201ENST00000529959 259 ntBASIC5.48□□□□□ -1.53
HOXA9P31269 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HOXA9P31269 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.48□□□□□ -1.53
HOXA9P31269 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.48□□□□□ -1.53
HOXA9P31269 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
HOXA9P31269 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.48□□□□□ -1.53
HOXA9P31269 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.48□□□□□ -1.53
HOXA9P31269 AC008814.1-201ENST00000603797 406 ntBASIC5.48□□□□□ -1.53
HOXA9P31269 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC5.48□□□□□ -1.53
HOXA9P31269 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.48□□□□□ -1.53
HOXA9P31269 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.48□□□□□ -1.53
HOXA9P31269 AC093671.1-201ENST00000624981 2929 ntBASIC5.48□□□□□ -1.53
HOXA9P31269 AC007996.1-201ENST00000620414 2821 ntBASIC5.48□□□□□ -1.53
HOXA9P31269 AP002512.4-202ENST00000641599 4530 ntBASIC5.48□□□□□ -1.53
HOXA9P31269 AC100757.1-201ENST00000616872 1835 ntBASIC5.48□□□□□ -1.53
HOXA9P31269 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.48□□□□□ -1.53
HOXA9P31269 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.48□□□□□ -1.53
HOXA9P31269 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
HOXA9P31269 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
HOXA9P31269 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.47□□□□□ -1.53
HOXA9P31269 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
HOXA9P31269 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.47□□□□□ -1.53
HOXA9P31269 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HOXA9P31269 RNA5SP90-201ENST00000364801 99 ntBASIC5.47□□□□□ -1.53
HOXA9P31269 AL353625.1-202ENST00000366273 571 ntBASIC5.47□□□□□ -1.53
HOXA9P31269 SNORA56-201ENST00000383966 129 ntBASIC5.47□□□□□ -1.53
HOXA9P31269 TRAV35-201ENST00000390462 330 ntBASIC5.47□□□□□ -1.53
HOXA9P31269 PPIAP9-201ENST00000403866 498 ntBASIC5.47□□□□□ -1.53
HOXA9P31269 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.47□□□□□ -1.53
HOXA9P31269 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.47□□□□□ -1.53
HOXA9P31269 MRPS21P2-201ENST00000424704 264 ntBASIC5.47□□□□□ -1.53
HOXA9P31269 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.47□□□□□ -1.53
HOXA9P31269 AC124944.2-201ENST00000429866 1242 ntBASIC5.47□□□□□ -1.53
HOXA9P31269 AC138761.5-201ENST00000433967 325 ntBASIC5.47□□□□□ -1.53
HOXA9P31269 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC5.47□□□□□ -1.53
HOXA9P31269 MED28P3-201ENST00000444288 531 ntBASIC5.47□□□□□ -1.53
HOXA9P31269 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.47□□□□□ -1.53
HOXA9P31269 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.47□□□□□ -1.53
HOXA9P31269 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
HOXA9P31269 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.47□□□□□ -1.53
HOXA9P31269 AC017007.3-201ENST00000479865 435 ntBASIC5.47□□□□□ -1.53
HOXA9P31269 HMGN2P25-201ENST00000486956 268 ntBASIC5.47□□□□□ -1.53
HOXA9P31269 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC5.47□□□□□ -1.53
HOXA9P31269 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.47□□□□□ -1.53
HOXA9P31269 AC022360.1-201ENST00000521058 340 ntBASIC5.47□□□□□ -1.53
HOXA9P31269 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.47□□□□□ -1.53
HOXA9P31269 MIR4691-201ENST00000583764 85 ntBASIC5.47□□□□□ -1.53
HOXA9P31269 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.47□□□□□ -1.53
HOXA9P31269 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
HOXA9P31269 AL627230.1-201ENST00000613077 211 ntBASIC5.47□□□□□ -1.53
HOXA9P31269 AL591926.8-201ENST00000616876 211 ntBASIC5.47□□□□□ -1.53
HOXA9P31269 MTCO1P1-201ENST00000624263 1081 ntBASIC5.47□□□□□ -1.53
HOXA9P31269 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
HOXA9P31269 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
HOXA9P31269 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
HOXA9P31269 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.47□□□□□ -1.53
HOXA9P31269 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
HOXA9P31269 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.53
HOXA9P31269 AP005432.1-201ENST00000580891 3485 ntBASIC5.46□□□□□ -1.53
HOXA9P31269 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.46□□□□□ -1.53
HOXA9P31269 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.46□□□□□ -1.53
HOXA9P31269 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
HOXA9P31269 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.53
HOXA9P31269 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
HOXA9P31269 RN7SKP95-201ENST00000362860 303 ntBASIC5.46□□□□□ -1.54
HOXA9P31269 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC5.46□□□□□ -1.54
HOXA9P31269 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
HOXA9P31269 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC5.46□□□□□ -1.54
HOXA9P31269 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC5.46□□□□□ -1.54
HOXA9P31269 SEPT7P3-201ENST00000455017 621 ntBASIC5.46□□□□□ -1.54
HOXA9P31269 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.46□□□□□ -1.54
HOXA9P31269 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.46□□□□□ -1.54
HOXA9P31269 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC5.46□□□□□ -1.54
HOXA9P31269 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.46□□□□□ -1.54
HOXA9P31269 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
HOXA9P31269 AC063949.1-201ENST00000552900 865 ntBASIC5.46□□□□□ -1.54
HOXA9P31269 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
HOXA9P31269 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.46□□□□□ -1.54
HOXA9P31269 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC5.46□□□□□ -1.54
HOXA9P31269 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.46□□□□□ -1.54
HOXA9P31269 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.46□□□□□ -1.54
HOXA9P31269 AL162431.4-201ENST00000604674 411 ntBASIC5.46□□□□□ -1.54
HOXA9P31269 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.46□□□□□ -1.54
HOXA9P31269 AL356752.1-201ENST00000615844 593 ntBASIC5.46□□□□□ -1.54
HOXA9P31269 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.46□□□□□ -1.54
HOXA9P31269 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC5.46□□□□□ -1.54
HOXA9P31269 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.46□□□□□ -1.54
HOXA9P31269 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC5.46□□□□□ -1.54
HOXA9P31269 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms