Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC6.2□□□□□ -1.42
SSX2IPQ9Y2D8 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC6.2□□□□□ -1.42
SSX2IPQ9Y2D8 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC6.2□□□□□ -1.42
SSX2IPQ9Y2D8 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC6.2□□□□□ -1.42
SSX2IPQ9Y2D8 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC6.2□□□□□ -1.42
SSX2IPQ9Y2D8 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.2□□□□□ -1.42
SSX2IPQ9Y2D8 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC6.2□□□□□ -1.42
SSX2IPQ9Y2D8 AC068620.3-201ENST00000602749 560 ntBASIC6.2□□□□□ -1.42
SSX2IPQ9Y2D8 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC6.2□□□□□ -1.42
SSX2IPQ9Y2D8 AC025016.1-201ENST00000616746 682 ntBASIC6.2□□□□□ -1.42
SSX2IPQ9Y2D8 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC6.2□□□□□ -1.42
SSX2IPQ9Y2D8 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC6.2□□□□□ -1.42
SSX2IPQ9Y2D8 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC6.2□□□□□ -1.42
SSX2IPQ9Y2D8 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.2□□□□□ -1.42
SSX2IPQ9Y2D8 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC6.2□□□□□ -1.42
SSX2IPQ9Y2D8 AC073869.7-201ENST00000640874 297 ntBASIC6.2□□□□□ -1.42
SSX2IPQ9Y2D8 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC6.2□□□□□ -1.42
SSX2IPQ9Y2D8 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SSX2IPQ9Y2D8 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC6.2□□□□□ -1.42
SSX2IPQ9Y2D8 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SSX2IPQ9Y2D8 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC6.2□□□□□ -1.42
SSX2IPQ9Y2D8 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SSX2IPQ9Y2D8 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SSX2IPQ9Y2D8 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SSX2IPQ9Y2D8 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
SSX2IPQ9Y2D8 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SSX2IPQ9Y2D8 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
SSX2IPQ9Y2D8 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
SSX2IPQ9Y2D8 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SSX2IPQ9Y2D8 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SSX2IPQ9Y2D8 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
SSX2IPQ9Y2D8 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
SSX2IPQ9Y2D8 YES1P1-201ENST00000418510 1628 ntBASIC6.19□□□□□ -1.42
SSX2IPQ9Y2D8 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SSX2IPQ9Y2D8 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC6.19□□□□□ -1.42
SSX2IPQ9Y2D8 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SSX2IPQ9Y2D8 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
SSX2IPQ9Y2D8 GAPDHP42-201ENST00000406848 981 ntBASIC6.19□□□□□ -1.42
SSX2IPQ9Y2D8 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC6.19□□□□□ -1.42
SSX2IPQ9Y2D8 OR6E1P-201ENST00000414424 923 ntBASIC6.19□□□□□ -1.42
SSX2IPQ9Y2D8 Z93019.1-201ENST00000416450 973 ntBASIC6.19□□□□□ -1.42
SSX2IPQ9Y2D8 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC6.19□□□□□ -1.42
SSX2IPQ9Y2D8 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC6.19□□□□□ -1.42
SSX2IPQ9Y2D8 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC6.19□□□□□ -1.42
SSX2IPQ9Y2D8 MTND2P21-201ENST00000436242 1042 ntBASIC6.19□□□□□ -1.42
SSX2IPQ9Y2D8 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC6.19□□□□□ -1.42
SSX2IPQ9Y2D8 AC135999.1-201ENST00000478962 479 ntBASIC6.19□□□□□ -1.42
SSX2IPQ9Y2D8 AC087672.1-201ENST00000479876 766 ntBASIC6.19□□□□□ -1.42
SSX2IPQ9Y2D8 AL035690.1-201ENST00000490892 383 ntBASIC6.19□□□□□ -1.42
SSX2IPQ9Y2D8 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC6.19□□□□□ -1.42
SSX2IPQ9Y2D8 RNA5SP34-201ENST00000516887 130 ntBASIC6.19□□□□□ -1.42
SSX2IPQ9Y2D8 AC021678.3-201ENST00000517893 476 ntBASIC6.19□□□□□ -1.42
SSX2IPQ9Y2D8 AC136777.2-201ENST00000522979 358 ntBASIC6.19□□□□□ -1.42
SSX2IPQ9Y2D8 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
SSX2IPQ9Y2D8 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC6.19□□□□□ -1.42
SSX2IPQ9Y2D8 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC6.19□□□□□ -1.42
SSX2IPQ9Y2D8 AC010547.7-201ENST00000570323 333 ntBASIC6.19□□□□□ -1.42
SSX2IPQ9Y2D8 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.19□□□□□ -1.42
SSX2IPQ9Y2D8 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC6.19□□□□□ -1.42
SSX2IPQ9Y2D8 GMFG-212ENST00000602185 423 ntTSL 3 BASIC6.19□□□□□ -1.42
SSX2IPQ9Y2D8 HCG18-243ENST00000602498 327 ntTSL 3 BASIC6.19□□□□□ -1.42
SSX2IPQ9Y2D8 AC027334.1-201ENST00000603257 310 ntBASIC6.19□□□□□ -1.42
SSX2IPQ9Y2D8 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC6.19□□□□□ -1.42
SSX2IPQ9Y2D8 AL096803.3-201ENST00000609032 532 ntBASIC6.19□□□□□ -1.42
SSX2IPQ9Y2D8 AC068787.1-201ENST00000623908 691 ntBASIC6.19□□□□□ -1.42
SSX2IPQ9Y2D8 AC073342.3-201ENST00000624211 193 ntBASIC6.19□□□□□ -1.42
SSX2IPQ9Y2D8 WDR75-207ENST00000631047 270 ntTSL 5 BASIC6.19□□□□□ -1.42
SSX2IPQ9Y2D8 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
SSX2IPQ9Y2D8 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
SSX2IPQ9Y2D8 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
SSX2IPQ9Y2D8 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SSX2IPQ9Y2D8 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
SSX2IPQ9Y2D8 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SSX2IPQ9Y2D8 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SSX2IPQ9Y2D8 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SSX2IPQ9Y2D8 LINC01963-201ENST00000562038 3148 ntBASIC6.19□□□□□ -1.42
SSX2IPQ9Y2D8 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC6.18□□□□□ -1.42
SSX2IPQ9Y2D8 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
SSX2IPQ9Y2D8 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SSX2IPQ9Y2D8 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SSX2IPQ9Y2D8 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SSX2IPQ9Y2D8 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SSX2IPQ9Y2D8 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
SSX2IPQ9Y2D8 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
SSX2IPQ9Y2D8 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SSX2IPQ9Y2D8 TMEM161BP1-201ENST00000457388 1457 ntBASIC6.18□□□□□ -1.42
SSX2IPQ9Y2D8 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SSX2IPQ9Y2D8 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
SSX2IPQ9Y2D8 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
SSX2IPQ9Y2D8 OR9K1P-201ENST00000326513 941 ntBASIC6.18□□□□□ -1.42
SSX2IPQ9Y2D8 MIR365B-201ENST00000362317 111 ntBASIC6.18□□□□□ -1.42
SSX2IPQ9Y2D8 EEF1A1P29-201ENST00000416082 1096 ntBASIC6.18□□□□□ -1.42
SSX2IPQ9Y2D8 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC6.18□□□□□ -1.42
SSX2IPQ9Y2D8 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.18□□□□□ -1.42
SSX2IPQ9Y2D8 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.18□□□□□ -1.42
SSX2IPQ9Y2D8 MTND2P2-201ENST00000434633 945 ntBASIC6.18□□□□□ -1.42
SSX2IPQ9Y2D8 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC6.18□□□□□ -1.42
SSX2IPQ9Y2D8 AL162739.1-201ENST00000450606 307 ntBASIC6.18□□□□□ -1.42
SSX2IPQ9Y2D8 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC6.18□□□□□ -1.42
SSX2IPQ9Y2D8 RPS3AP15-201ENST00000483874 781 ntBASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms