Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC6.57□□□□□ -1.36
VTA1Q9NP79 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.57□□□□□ -1.36
VTA1Q9NP79 AL133445.1-201ENST00000467051 452 ntBASIC6.57□□□□□ -1.36
VTA1Q9NP79 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC6.57□□□□□ -1.36
VTA1Q9NP79 TSACC-207ENST00000470342 601 ntTSL 2 BASIC6.57□□□□□ -1.36
VTA1Q9NP79 RPS3AP15-201ENST00000483874 781 ntBASIC6.57□□□□□ -1.36
VTA1Q9NP79 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC6.57□□□□□ -1.36
VTA1Q9NP79 AC105233.1-201ENST00000498840 781 ntBASIC6.57□□□□□ -1.36
VTA1Q9NP79 RN7SKP287-201ENST00000516546 266 ntBASIC6.57□□□□□ -1.36
VTA1Q9NP79 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.57□□□□□ -1.36
VTA1Q9NP79 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.57□□□□□ -1.36
VTA1Q9NP79 DCN-210ENST00000547568 823 ntTSL 3 BASIC6.57□□□□□ -1.36
VTA1Q9NP79 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.57□□□□□ -1.36
VTA1Q9NP79 AC016180.1-201ENST00000567945 403 ntBASIC6.57□□□□□ -1.36
VTA1Q9NP79 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC6.57□□□□□ -1.36
VTA1Q9NP79 SNORD39.2-201ENST00000579995 76 ntBASIC6.57□□□□□ -1.36
VTA1Q9NP79 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC6.57□□□□□ -1.36
VTA1Q9NP79 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.57□□□□□ -1.36
VTA1Q9NP79 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC6.57□□□□□ -1.36
VTA1Q9NP79 AC022022.2-201ENST00000602989 360 ntBASIC6.57□□□□□ -1.36
VTA1Q9NP79 AC093424.1-201ENST00000604999 338 ntBASIC6.57□□□□□ -1.36
VTA1Q9NP79 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC6.57□□□□□ -1.36
VTA1Q9NP79 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC6.57□□□□□ -1.36
VTA1Q9NP79 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.57□□□□□ -1.36
VTA1Q9NP79 RMST_10.1-201ENST00000616309 154 ntBASIC6.57□□□□□ -1.36
VTA1Q9NP79 AL035661.1-201ENST00000620459 1144 ntBASIC6.57□□□□□ -1.36
VTA1Q9NP79 AC069234.4-201ENST00000621276 412 ntBASIC6.57□□□□□ -1.36
VTA1Q9NP79 AC004836.1-201ENST00000623032 634 ntBASIC6.57□□□□□ -1.36
VTA1Q9NP79 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
VTA1Q9NP79 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
VTA1Q9NP79 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.57□□□□□ -1.36
VTA1Q9NP79 YES1P1-201ENST00000418510 1628 ntBASIC6.57□□□□□ -1.36
VTA1Q9NP79 NCOA4P2-201ENST00000340589 1813 ntBASIC6.57□□□□□ -1.36
VTA1Q9NP79 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.57□□□□□ -1.36
VTA1Q9NP79 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
VTA1Q9NP79 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
VTA1Q9NP79 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
VTA1Q9NP79 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC6.56□□□□□ -1.36
VTA1Q9NP79 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC6.56□□□□□ -1.36
VTA1Q9NP79 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
VTA1Q9NP79 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.56□□□□□ -1.36
VTA1Q9NP79 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
VTA1Q9NP79 AC011503.2-201ENST00000594230 1500 ntBASIC6.56□□□□□ -1.36
VTA1Q9NP79 AC092451.3-201ENST00000625067 1343 ntBASIC6.56□□□□□ -1.36
VTA1Q9NP79 LINC02019-201ENST00000608605 2060 ntBASIC6.56□□□□□ -1.36
VTA1Q9NP79 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
VTA1Q9NP79 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
VTA1Q9NP79 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
VTA1Q9NP79 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC6.56□□□□□ -1.36
VTA1Q9NP79 RN7SKP74-201ENST00000362849 309 ntBASIC6.56□□□□□ -1.36
VTA1Q9NP79 AL357752.1-201ENST00000412817 349 ntBASIC6.56□□□□□ -1.36
VTA1Q9NP79 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC6.56□□□□□ -1.36
VTA1Q9NP79 RPA2P2-201ENST00000419698 796 ntBASIC6.56□□□□□ -1.36
VTA1Q9NP79 CETN4P-201ENST00000432407 469 ntBASIC6.56□□□□□ -1.36
VTA1Q9NP79 MED6P1-201ENST00000439659 713 ntBASIC6.56□□□□□ -1.36
VTA1Q9NP79 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC6.56□□□□□ -1.36
VTA1Q9NP79 MTCO2P6-201ENST00000463134 685 ntBASIC6.56□□□□□ -1.36
VTA1Q9NP79 OARD1-211ENST00000480585 829 ntTSL 3 BASIC6.56□□□□□ -1.36
VTA1Q9NP79 AC008945.1-201ENST00000505144 499 ntBASIC6.56□□□□□ -1.36
VTA1Q9NP79 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC6.56□□□□□ -1.36
VTA1Q9NP79 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC6.56□□□□□ -1.36
VTA1Q9NP79 BX510359.5-201ENST00000515651 304 ntBASIC6.56□□□□□ -1.36
VTA1Q9NP79 AP001207.2-201ENST00000519490 539 ntBASIC6.56□□□□□ -1.36
VTA1Q9NP79 IGLV2-28-201ENST00000520681 304 ntBASIC6.56□□□□□ -1.36
VTA1Q9NP79 NRBF2P4-201ENST00000520874 850 ntBASIC6.56□□□□□ -1.36
VTA1Q9NP79 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC6.56□□□□□ -1.36
VTA1Q9NP79 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC6.56□□□□□ -1.36
VTA1Q9NP79 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
VTA1Q9NP79 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC6.56□□□□□ -1.36
VTA1Q9NP79 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC6.56□□□□□ -1.36
VTA1Q9NP79 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC6.56□□□□□ -1.36
VTA1Q9NP79 AC090651.1-201ENST00000567865 634 ntBASIC6.56□□□□□ -1.36
VTA1Q9NP79 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.56□□□□□ -1.36
VTA1Q9NP79 GMFG-212ENST00000602185 423 ntTSL 3 BASIC6.56□□□□□ -1.36
VTA1Q9NP79 AC084373.1-201ENST00000603311 235 ntBASIC6.56□□□□□ -1.36
VTA1Q9NP79 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC6.56□□□□□ -1.36
VTA1Q9NP79 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC6.56□□□□□ -1.36
VTA1Q9NP79 AC048344.4-201ENST00000619744 527 ntBASIC6.56□□□□□ -1.36
VTA1Q9NP79 AC008115.4-201ENST00000619780 775 ntBASIC6.56□□□□□ -1.36
VTA1Q9NP79 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC6.56□□□□□ -1.36
VTA1Q9NP79 AC136428.4-201ENST00000634254 1155 ntBASIC6.56□□□□□ -1.36
VTA1Q9NP79 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.56□□□□□ -1.36
VTA1Q9NP79 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.56□□□□□ -1.36
VTA1Q9NP79 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.56□□□□□ -1.36
VTA1Q9NP79 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
VTA1Q9NP79 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC6.56□□□□□ -1.36
VTA1Q9NP79 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
VTA1Q9NP79 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
VTA1Q9NP79 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.56□□□□□ -1.36
VTA1Q9NP79 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
VTA1Q9NP79 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC6.56□□□□□ -1.36
VTA1Q9NP79 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.56□□□□□ -1.36
VTA1Q9NP79 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
VTA1Q9NP79 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
VTA1Q9NP79 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
VTA1Q9NP79 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
VTA1Q9NP79 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
VTA1Q9NP79 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
VTA1Q9NP79 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.55□□□□□ -1.36
VTA1Q9NP79 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms