Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 SHPRH-203ENST00000367505 7201 ntAPPRIS P2 TSL 5 BASIC3.45□□□□□ -1.86
ALMS1Q8TCU4 NSF-206ENST00000575068 2667 ntTSL 2 BASIC3.45□□□□□ -1.86
ALMS1Q8TCU4 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
ALMS1Q8TCU4 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
ALMS1Q8TCU4 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
ALMS1Q8TCU4 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
ALMS1Q8TCU4 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
ALMS1Q8TCU4 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC3.45□□□□□ -1.86
ALMS1Q8TCU4 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC3.45□□□□□ -1.86
ALMS1Q8TCU4 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC3.44□□□□□ -1.86
ALMS1Q8TCU4 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC3.44□□□□□ -1.86
ALMS1Q8TCU4 RNA5-8SP7-201ENST00000363443 155 ntBASIC3.44□□□□□ -1.86
ALMS1Q8TCU4 Z97832.1-201ENST00000402490 328 ntBASIC3.44□□□□□ -1.86
ALMS1Q8TCU4 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC3.44□□□□□ -1.86
ALMS1Q8TCU4 SNORA84-201ENST00000459229 133 ntBASIC3.44□□□□□ -1.86
ALMS1Q8TCU4 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC3.44□□□□□ -1.86
ALMS1Q8TCU4 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC3.44□□□□□ -1.86
ALMS1Q8TCU4 AC034105.4-201ENST00000568304 277 ntBASIC3.44□□□□□ -1.86
ALMS1Q8TCU4 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC3.44□□□□□ -1.86
ALMS1Q8TCU4 AL121873.1-201ENST00000616013 524 ntBASIC3.44□□□□□ -1.86
ALMS1Q8TCU4 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC3.44□□□□□ -1.86
ALMS1Q8TCU4 AC004836.1-201ENST00000623032 634 ntBASIC3.44□□□□□ -1.86
ALMS1Q8TCU4 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
ALMS1Q8TCU4 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.44□□□□□ -1.86
ALMS1Q8TCU4 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
ALMS1Q8TCU4 AL359715.3-201ENST00000569267 2123 ntBASIC3.44□□□□□ -1.86
ALMS1Q8TCU4 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC3.44□□□□□ -1.86
ALMS1Q8TCU4 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC3.44□□□□□ -1.86
ALMS1Q8TCU4 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
ALMS1Q8TCU4 AL121977.1-201ENST00000401636 979 ntBASIC3.44□□□□□ -1.86
ALMS1Q8TCU4 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC3.44□□□□□ -1.86
ALMS1Q8TCU4 AC092651.1-201ENST00000426110 312 ntBASIC3.44□□□□□ -1.86
ALMS1Q8TCU4 BX276092.6-201ENST00000430476 250 ntBASIC3.44□□□□□ -1.86
ALMS1Q8TCU4 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.44□□□□□ -1.86
ALMS1Q8TCU4 BX276092.8-201ENST00000455722 250 ntBASIC3.44□□□□□ -1.86
ALMS1Q8TCU4 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
ALMS1Q8TCU4 AC012339.2-201ENST00000523996 453 ntBASIC3.44□□□□□ -1.86
ALMS1Q8TCU4 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC3.44□□□□□ -1.86
ALMS1Q8TCU4 EIF1P5-201ENST00000585002 234 ntBASIC3.44□□□□□ -1.86
ALMS1Q8TCU4 AP001267.4-201ENST00000602598 545 ntBASIC3.44□□□□□ -1.86
ALMS1Q8TCU4 AC011944.2-201ENST00000624440 683 ntBASIC3.44□□□□□ -1.86
ALMS1Q8TCU4 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC3.44□□□□□ -1.86
ALMS1Q8TCU4 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC3.44□□□□□ -1.86
ALMS1Q8TCU4 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
ALMS1Q8TCU4 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
ALMS1Q8TCU4 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC3.44□□□□□ -1.86
ALMS1Q8TCU4 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC3.44□□□□□ -1.86
ALMS1Q8TCU4 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
ALMS1Q8TCU4 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
ALMS1Q8TCU4 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
ALMS1Q8TCU4 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
ALMS1Q8TCU4 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
ALMS1Q8TCU4 OR4K15-201ENST00000305051 1216 ntBASIC3.44□□□□□ -1.86
ALMS1Q8TCU4 RPL31-204ENST00000409038 817 ntTSL 2 BASIC3.44□□□□□ -1.86
ALMS1Q8TCU4 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.44□□□□□ -1.86
ALMS1Q8TCU4 BX679664.2-201ENST00000439282 283 ntBASIC3.44□□□□□ -1.86
ALMS1Q8TCU4 RN7SL814P-201ENST00000487715 300 ntBASIC3.44□□□□□ -1.86
ALMS1Q8TCU4 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC3.44□□□□□ -1.86
ALMS1Q8TCU4 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC3.44□□□□□ -1.86
ALMS1Q8TCU4 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
ALMS1Q8TCU4 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
ALMS1Q8TCU4 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
ALMS1Q8TCU4 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC3.44□□□□□ -1.86
ALMS1Q8TCU4 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
ALMS1Q8TCU4 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC3.44□□□□□ -1.86
ALMS1Q8TCU4 MIR208A-201ENST00000362287 71 ntBASIC3.44□□□□□ -1.86
ALMS1Q8TCU4 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC3.44□□□□□ -1.86
ALMS1Q8TCU4 BX510359.2-201ENST00000417920 305 ntBASIC3.44□□□□□ -1.86
ALMS1Q8TCU4 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.44□□□□□ -1.86
ALMS1Q8TCU4 RPL5P2-201ENST00000429598 854 ntBASIC3.44□□□□□ -1.86
ALMS1Q8TCU4 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC3.44□□□□□ -1.86
ALMS1Q8TCU4 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.44□□□□□ -1.86
ALMS1Q8TCU4 AL034374.2-201ENST00000605281 548 ntBASIC3.44□□□□□ -1.86
ALMS1Q8TCU4 AC004232.3-201ENST00000622977 525 ntBASIC3.44□□□□□ -1.86
ALMS1Q8TCU4 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC3.44□□□□□ -1.86
ALMS1Q8TCU4 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC3.43□□□□□ -1.86
ALMS1Q8TCU4 PPP1R12B-216ENST00000608999 15248 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
ALMS1Q8TCU4 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
ALMS1Q8TCU4 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC3.43□□□□□ -1.86
ALMS1Q8TCU4 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC3.43□□□□□ -1.86
ALMS1Q8TCU4 AC099654.2-201ENST00000433031 1980 ntBASIC3.43□□□□□ -1.86
ALMS1Q8TCU4 DTNA-225ENST00000595022 6016 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
ALMS1Q8TCU4 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
ALMS1Q8TCU4 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC3.43□□□□□ -1.86
ALMS1Q8TCU4 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
ALMS1Q8TCU4 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
ALMS1Q8TCU4 ZNF451-204ENST00000370708 9478 ntTSL 2 BASIC3.43□□□□□ -1.86
ALMS1Q8TCU4 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
ALMS1Q8TCU4 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
ALMS1Q8TCU4 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC3.43□□□□□ -1.86
ALMS1Q8TCU4 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
ALMS1Q8TCU4 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
ALMS1Q8TCU4 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
ALMS1Q8TCU4 SNORD1C-201ENST00000363315 78 ntBASIC3.43□□□□□ -1.86
ALMS1Q8TCU4 RNA5SP28-201ENST00000363841 119 ntBASIC3.43□□□□□ -1.86
ALMS1Q8TCU4 SNORA11C-201ENST00000408532 129 ntBASIC3.43□□□□□ -1.86
ALMS1Q8TCU4 RN7SKP106-201ENST00000410832 272 ntBASIC3.43□□□□□ -1.86
ALMS1Q8TCU4 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
ALMS1Q8TCU4 SNRPCP3-201ENST00000474888 476 ntBASIC3.43□□□□□ -1.86
ALMS1Q8TCU4 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms