Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
PKNOX1P55347 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.09□□□□□ -1.59
PKNOX1P55347 FO393422.1-201ENST00000603908 708 ntBASIC5.09□□□□□ -1.59
PKNOX1P55347 AC018695.5-201ENST00000605872 315 ntBASIC5.09□□□□□ -1.59
PKNOX1P55347 AC010245.2-201ENST00000606908 1167 ntBASIC5.09□□□□□ -1.59
PKNOX1P55347 WBP1LP8-201ENST00000617401 327 ntBASIC5.09□□□□□ -1.59
PKNOX1P55347 AP000648.2-201ENST00000624182 404 ntBASIC5.09□□□□□ -1.59
PKNOX1P55347 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.09□□□□□ -1.59
PKNOX1P55347 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.09□□□□□ -1.59
PKNOX1P55347 AC074101.1-201ENST00000637861 241 ntBASIC5.09□□□□□ -1.59
PKNOX1P55347 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.09□□□□□ -1.59
PKNOX1P55347 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PKNOX1P55347 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PKNOX1P55347 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
PKNOX1P55347 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
PKNOX1P55347 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.09□□□□□ -1.6
PKNOX1P55347 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.08□□□□□ -1.6
PKNOX1P55347 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PKNOX1P55347 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PKNOX1P55347 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.08□□□□□ -1.6
PKNOX1P55347 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
PKNOX1P55347 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PKNOX1P55347 MTHFD2P5-201ENST00000320415 844 ntBASIC5.08□□□□□ -1.6
PKNOX1P55347 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PKNOX1P55347 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.08□□□□□ -1.6
PKNOX1P55347 MIR105-1-201ENST00000385222 81 ntBASIC5.08□□□□□ -1.6
PKNOX1P55347 OR4K12P-201ENST00000406538 961 ntBASIC5.08□□□□□ -1.6
PKNOX1P55347 MARK2P12-201ENST00000420129 585 ntBASIC5.08□□□□□ -1.6
PKNOX1P55347 RPL24P2-201ENST00000421023 475 ntBASIC5.08□□□□□ -1.6
PKNOX1P55347 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.08□□□□□ -1.6
PKNOX1P55347 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.08□□□□□ -1.6
PKNOX1P55347 AL390119.1-201ENST00000440329 312 ntBASIC5.08□□□□□ -1.6
PKNOX1P55347 RPL36AP39-201ENST00000445859 318 ntBASIC5.08□□□□□ -1.6
PKNOX1P55347 AC073909.1-201ENST00000447112 999 ntBASIC5.08□□□□□ -1.6
PKNOX1P55347 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.08□□□□□ -1.6
PKNOX1P55347 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.08□□□□□ -1.6
PKNOX1P55347 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PKNOX1P55347 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.08□□□□□ -1.6
PKNOX1P55347 AC112191.2-201ENST00000522428 333 ntBASIC5.08□□□□□ -1.6
PKNOX1P55347 OR8A2P-201ENST00000528631 952 ntBASIC5.08□□□□□ -1.6
PKNOX1P55347 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.08□□□□□ -1.6
PKNOX1P55347 AL390334.1-201ENST00000556395 450 ntBASIC5.08□□□□□ -1.6
PKNOX1P55347 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.08□□□□□ -1.6
PKNOX1P55347 RBM22P1-201ENST00000578589 1214 ntBASIC5.08□□□□□ -1.6
PKNOX1P55347 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.08□□□□□ -1.6
PKNOX1P55347 MIR3936-201ENST00000584304 110 ntBASIC5.08□□□□□ -1.6
PKNOX1P55347 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.08□□□□□ -1.6
PKNOX1P55347 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.08□□□□□ -1.6
PKNOX1P55347 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.08□□□□□ -1.6
PKNOX1P55347 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC5.08□□□□□ -1.6
PKNOX1P55347 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.08□□□□□ -1.6
PKNOX1P55347 AC022960.2-201ENST00000616300 666 ntBASIC5.08□□□□□ -1.6
PKNOX1P55347 AC118658.2-201ENST00000618697 459 ntBASIC5.08□□□□□ -1.6
PKNOX1P55347 AL691477.1-201ENST00000624398 162 ntBASIC5.08□□□□□ -1.6
PKNOX1P55347 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC5.08□□□□□ -1.6
PKNOX1P55347 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PKNOX1P55347 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PKNOX1P55347 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
PKNOX1P55347 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PKNOX1P55347 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
PKNOX1P55347 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.08□□□□□ -1.6
PKNOX1P55347 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC5.07□□□□□ -1.6
PKNOX1P55347 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
PKNOX1P55347 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.07□□□□□ -1.6
PKNOX1P55347 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PKNOX1P55347 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.07□□□□□ -1.6
PKNOX1P55347 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PKNOX1P55347 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.07□□□□□ -1.6
PKNOX1P55347 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PKNOX1P55347 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
PKNOX1P55347 RNA5SP510-201ENST00000364697 99 ntBASIC5.07□□□□□ -1.6
PKNOX1P55347 AC007068.1-201ENST00000396690 844 ntBASIC5.07□□□□□ -1.6
PKNOX1P55347 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
PKNOX1P55347 AL391422.1-201ENST00000402155 436 ntBASIC5.07□□□□□ -1.6
PKNOX1P55347 RNA5SP296-201ENST00000410523 111 ntBASIC5.07□□□□□ -1.6
PKNOX1P55347 IPPKP1-201ENST00000422501 768 ntBASIC5.07□□□□□ -1.6
PKNOX1P55347 OR5M12P-201ENST00000423388 929 ntBASIC5.07□□□□□ -1.6
PKNOX1P55347 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.07□□□□□ -1.6
PKNOX1P55347 AL121578.1-201ENST00000428051 892 ntBASIC5.07□□□□□ -1.6
PKNOX1P55347 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.07□□□□□ -1.6
PKNOX1P55347 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.07□□□□□ -1.6
PKNOX1P55347 GTF3AP5-201ENST00000442645 697 ntBASIC5.07□□□□□ -1.6
PKNOX1P55347 HMGN1P36-201ENST00000446623 298 ntBASIC5.07□□□□□ -1.6
PKNOX1P55347 PPIA-203ENST00000451562 544 ntTSL 2 BASIC5.07□□□□□ -1.6
PKNOX1P55347 RANP1-206ENST00000455094 651 ntBASIC5.07□□□□□ -1.6
PKNOX1P55347 RPS4XP12-201ENST00000461747 709 ntBASIC5.07□□□□□ -1.6
PKNOX1P55347 AC104849.1-201ENST00000462623 405 ntBASIC5.07□□□□□ -1.6
PKNOX1P55347 RPL5P22-201ENST00000480199 884 ntBASIC5.07□□□□□ -1.6
PKNOX1P55347 AC091544.1-201ENST00000484702 348 ntBASIC5.07□□□□□ -1.6
PKNOX1P55347 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.07□□□□□ -1.6
PKNOX1P55347 OR2A3P-201ENST00000493774 953 ntBASIC5.07□□□□□ -1.6
PKNOX1P55347 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.07□□□□□ -1.6
PKNOX1P55347 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.07□□□□□ -1.6
PKNOX1P55347 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
PKNOX1P55347 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC5.07□□□□□ -1.6
PKNOX1P55347 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC5.07□□□□□ -1.6
PKNOX1P55347 AC135626.1-201ENST00000556983 435 ntBASIC5.07□□□□□ -1.6
PKNOX1P55347 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.07□□□□□ -1.6
PKNOX1P55347 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC5.07□□□□□ -1.6
PKNOX1P55347 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms