Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC5.56□□□□□ -1.52
BRCC3P46736 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.56□□□□□ -1.52
BRCC3P46736 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.56□□□□□ -1.52
BRCC3P46736 AC011840.5-201ENST00000582125 771 ntBASIC5.56□□□□□ -1.52
BRCC3P46736 AC025857.2-201ENST00000602711 238 ntBASIC5.56□□□□□ -1.52
BRCC3P46736 MIR6133-201ENST00000617057 108 ntBASIC5.56□□□□□ -1.52
BRCC3P46736 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
BRCC3P46736 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
BRCC3P46736 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.56□□□□□ -1.52
BRCC3P46736 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
BRCC3P46736 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
BRCC3P46736 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
BRCC3P46736 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.56□□□□□ -1.52
BRCC3P46736 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.56□□□□□ -1.52
BRCC3P46736 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
BRCC3P46736 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
BRCC3P46736 THAP12P4-201ENST00000528321 2266 ntBASIC5.55□□□□□ -1.52
BRCC3P46736 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
BRCC3P46736 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.55□□□□□ -1.52
BRCC3P46736 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.55□□□□□ -1.52
BRCC3P46736 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC5.55□□□□□ -1.52
BRCC3P46736 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
BRCC3P46736 SNORA51.8-201ENST00000384234 132 ntBASIC5.55□□□□□ -1.52
BRCC3P46736 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
BRCC3P46736 CHMP1B2P-201ENST00000399581 597 ntBASIC5.55□□□□□ -1.52
BRCC3P46736 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC5.55□□□□□ -1.52
BRCC3P46736 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.55□□□□□ -1.52
BRCC3P46736 AC124944.2-201ENST00000429866 1242 ntBASIC5.55□□□□□ -1.52
BRCC3P46736 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
BRCC3P46736 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.55□□□□□ -1.52
BRCC3P46736 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC5.55□□□□□ -1.52
BRCC3P46736 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
BRCC3P46736 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.55□□□□□ -1.52
BRCC3P46736 TAAR4P-201ENST00000454843 1039 ntBASIC5.55□□□□□ -1.52
BRCC3P46736 AC090589.1-201ENST00000473109 362 ntBASIC5.55□□□□□ -1.52
BRCC3P46736 RPL37AP8-201ENST00000494116 276 ntBASIC5.55□□□□□ -1.52
BRCC3P46736 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC5.55□□□□□ -1.52
BRCC3P46736 AC006427.1-201ENST00000514359 712 ntBASIC5.55□□□□□ -1.52
BRCC3P46736 GTF2IP11-201ENST00000526931 420 ntBASIC5.55□□□□□ -1.52
BRCC3P46736 EIF4A2P5-201ENST00000529914 499 ntBASIC5.55□□□□□ -1.52
BRCC3P46736 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.55□□□□□ -1.52
BRCC3P46736 MIR4700-201ENST00000578311 74 ntBASIC5.55□□□□□ -1.52
BRCC3P46736 MIR4433B-201ENST00000581329 102 ntBASIC5.55□□□□□ -1.52
BRCC3P46736 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.55□□□□□ -1.52
BRCC3P46736 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.55□□□□□ -1.52
BRCC3P46736 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC5.55□□□□□ -1.52
BRCC3P46736 AC011626.1-201ENST00000604710 562 ntBASIC5.55□□□□□ -1.52
BRCC3P46736 AC116651.1-201ENST00000609724 556 ntBASIC5.55□□□□□ -1.52
BRCC3P46736 AL627230.1-201ENST00000613077 211 ntBASIC5.55□□□□□ -1.52
BRCC3P46736 AL591926.8-201ENST00000616876 211 ntBASIC5.55□□□□□ -1.52
BRCC3P46736 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.55□□□□□ -1.52
BRCC3P46736 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.55□□□□□ -1.52
BRCC3P46736 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
BRCC3P46736 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.55□□□□□ -1.52
BRCC3P46736 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
BRCC3P46736 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
BRCC3P46736 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
BRCC3P46736 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
BRCC3P46736 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
BRCC3P46736 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
BRCC3P46736 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
BRCC3P46736 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
BRCC3P46736 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
BRCC3P46736 AL355488.2-201ENST00000609909 2850 ntBASIC5.54□□□□□ -1.52
BRCC3P46736 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.54□□□□□ -1.52
BRCC3P46736 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
BRCC3P46736 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.54□□□□□ -1.52
BRCC3P46736 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
BRCC3P46736 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
BRCC3P46736 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
BRCC3P46736 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
BRCC3P46736 SNORA70.6-201ENST00000383934 134 ntBASIC5.54□□□□□ -1.52
BRCC3P46736 AL133270.1-201ENST00000402635 279 ntBASIC5.54□□□□□ -1.52
BRCC3P46736 AL354766.1-201ENST00000423396 542 ntBASIC5.54□□□□□ -1.52
BRCC3P46736 AC017019.1-201ENST00000426129 261 ntBASIC5.54□□□□□ -1.52
BRCC3P46736 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.54□□□□□ -1.52
BRCC3P46736 RPL34P20-201ENST00000442771 351 ntBASIC5.54□□□□□ -1.52
BRCC3P46736 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.54□□□□□ -1.52
BRCC3P46736 AC091685.2-201ENST00000454924 864 ntBASIC5.54□□□□□ -1.52
BRCC3P46736 HMGN2P25-201ENST00000486956 268 ntBASIC5.54□□□□□ -1.52
BRCC3P46736 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.54□□□□□ -1.52
BRCC3P46736 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC5.54□□□□□ -1.52
BRCC3P46736 AP001922.4-201ENST00000526967 290 ntBASIC5.54□□□□□ -1.52
BRCC3P46736 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.54□□□□□ -1.52
BRCC3P46736 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.54□□□□□ -1.52
BRCC3P46736 AC023389.2-201ENST00000580031 955 ntBASIC5.54□□□□□ -1.52
BRCC3P46736 MIR4691-201ENST00000583764 85 ntBASIC5.54□□□□□ -1.52
BRCC3P46736 AC107993.1-201ENST00000591343 684 ntBASIC5.54□□□□□ -1.52
BRCC3P46736 AC015849.6-201ENST00000605454 474 ntBASIC5.54□□□□□ -1.52
BRCC3P46736 AP005131.7-201ENST00000610087 611 ntBASIC5.54□□□□□ -1.52
BRCC3P46736 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.54□□□□□ -1.52
BRCC3P46736 AP001784.1-201ENST00000624107 428 ntBASIC5.54□□□□□ -1.52
BRCC3P46736 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
BRCC3P46736 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.54□□□□□ -1.52
BRCC3P46736 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
BRCC3P46736 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.54□□□□□ -1.52
BRCC3P46736 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
BRCC3P46736 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
BRCC3P46736 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.54□□□□□ -1.52
BRCC3P46736 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms