Protein–RNA interactions for Protein: P41225

SOX3, Transcription factor SOX-3, humanhuman

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3P41225 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
SOX3P41225 MIR7-1-201ENST00000384871 110 ntBASIC5.05□□□□□ -1.6
SOX3P41225 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
SOX3P41225 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SOX3P41225 BX510359.3-201ENST00000422168 306 ntBASIC5.05□□□□□ -1.6
SOX3P41225 RCC2P2-201ENST00000422174 918 ntBASIC5.05□□□□□ -1.6
SOX3P41225 AL355433.1-201ENST00000422804 300 ntBASIC5.05□□□□□ -1.6
SOX3P41225 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
SOX3P41225 MTATP6P11-201ENST00000428071 670 ntBASIC5.05□□□□□ -1.6
SOX3P41225 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC5.05□□□□□ -1.6
SOX3P41225 AC105399.1-202ENST00000447303 205 ntBASIC5.05□□□□□ -1.6
SOX3P41225 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.05□□□□□ -1.6
SOX3P41225 C1DP3-201ENST00000455013 423 ntBASIC5.05□□□□□ -1.6
SOX3P41225 OR2AO1P-201ENST00000476497 403 ntBASIC5.05□□□□□ -1.6
SOX3P41225 RPS4XP14-201ENST00000493072 781 ntBASIC5.05□□□□□ -1.6
SOX3P41225 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.05□□□□□ -1.6
SOX3P41225 AC021193.1-201ENST00000511607 420 ntBASIC5.05□□□□□ -1.6
SOX3P41225 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.05□□□□□ -1.6
SOX3P41225 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.05□□□□□ -1.6
SOX3P41225 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.05□□□□□ -1.6
SOX3P41225 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.05□□□□□ -1.6
SOX3P41225 AC079064.1-201ENST00000528365 362 ntBASIC5.05□□□□□ -1.6
SOX3P41225 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.05□□□□□ -1.6
SOX3P41225 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.05□□□□□ -1.6
SOX3P41225 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.05□□□□□ -1.6
SOX3P41225 BLZF2P-201ENST00000553776 1130 ntBASIC5.05□□□□□ -1.6
SOX3P41225 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.05□□□□□ -1.6
SOX3P41225 AL731537.2-201ENST00000561565 951 ntBASIC5.05□□□□□ -1.6
SOX3P41225 RN7SL290P-201ENST00000578661 300 ntBASIC5.05□□□□□ -1.6
SOX3P41225 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.05□□□□□ -1.6
SOX3P41225 MIR4433B-201ENST00000581329 102 ntBASIC5.05□□□□□ -1.6
SOX3P41225 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.05□□□□□ -1.6
SOX3P41225 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.05□□□□□ -1.6
SOX3P41225 AC020763.5-201ENST00000623298 430 ntBASIC5.05□□□□□ -1.6
SOX3P41225 AC136428.4-201ENST00000634254 1155 ntBASIC5.05□□□□□ -1.6
SOX3P41225 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC5.05□□□□□ -1.6
SOX3P41225 SAMMSON-209ENST00000641222 1100 ntBASIC5.05□□□□□ -1.6
SOX3P41225 CASC19-264ENST00000641912 1184 ntBASIC5.05□□□□□ -1.6
SOX3P41225 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SOX3P41225 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SOX3P41225 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.05□□□□□ -1.6
SOX3P41225 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SOX3P41225 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
SOX3P41225 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.05□□□□□ -1.6
SOX3P41225 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
SOX3P41225 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SOX3P41225 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.05□□□□□ -1.6
SOX3P41225 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
SOX3P41225 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SOX3P41225 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SOX3P41225 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SOX3P41225 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SOX3P41225 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SOX3P41225 FTO-203ENST00000460382 1517 ntTSL 5 BASIC5.04□□□□□ -1.6
SOX3P41225 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.04□□□□□ -1.6
SOX3P41225 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SOX3P41225 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SOX3P41225 RNU6-1331P-201ENST00000363658 106 ntBASIC5.04□□□□□ -1.6
SOX3P41225 RNA5SP335-201ENST00000363817 110 ntBASIC5.04□□□□□ -1.6
SOX3P41225 USP9YP19-201ENST00000412165 485 ntBASIC5.04□□□□□ -1.6
SOX3P41225 Z68694.1-201ENST00000413929 841 ntBASIC5.04□□□□□ -1.6
SOX3P41225 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.04□□□□□ -1.6
SOX3P41225 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.04□□□□□ -1.6
SOX3P41225 RPL7P56-201ENST00000429441 717 ntBASIC5.04□□□□□ -1.6
SOX3P41225 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.04□□□□□ -1.6
SOX3P41225 RPL7L1P9-201ENST00000431298 745 ntBASIC5.04□□□□□ -1.6
SOX3P41225 AC073465.2-201ENST00000440938 498 ntBASIC5.04□□□□□ -1.6
SOX3P41225 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.04□□□□□ -1.6
SOX3P41225 IGBP1P3-201ENST00000447449 1000 ntBASIC5.04□□□□□ -1.6
SOX3P41225 AL606490.1-201ENST00000452266 765 ntBASIC5.04□□□□□ -1.6
SOX3P41225 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.04□□□□□ -1.6
SOX3P41225 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.04□□□□□ -1.6
SOX3P41225 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SOX3P41225 MTND6P2-201ENST00000512226 524 ntBASIC5.04□□□□□ -1.6
SOX3P41225 AC117525.1-201ENST00000515228 503 ntBASIC5.04□□□□□ -1.6
SOX3P41225 SCARNA16.4-201ENST00000516956 187 ntBASIC5.04□□□□□ -1.6
SOX3P41225 AC104997.1-201ENST00000519761 717 ntBASIC5.04□□□□□ -1.6
SOX3P41225 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.04□□□□□ -1.6
SOX3P41225 AL359715.3-201ENST00000569267 2123 ntBASIC5.04□□□□□ -1.6
SOX3P41225 MIR7853-201ENST00000584820 132 ntBASIC5.04□□□□□ -1.6
SOX3P41225 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.04□□□□□ -1.6
SOX3P41225 SUMO2P15-201ENST00000604285 278 ntBASIC5.04□□□□□ -1.6
SOX3P41225 AC015802.5-201ENST00000607478 399 ntBASIC5.04□□□□□ -1.6
SOX3P41225 AC009032.1-201ENST00000617574 431 ntBASIC5.04□□□□□ -1.6
SOX3P41225 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.04□□□□□ -1.6
SOX3P41225 MIR6837-201ENST00000620884 64 ntBASIC5.04□□□□□ -1.6
SOX3P41225 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.04□□□□□ -1.6
SOX3P41225 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SOX3P41225 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SOX3P41225 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.04□□□□□ -1.6
SOX3P41225 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.04□□□□□ -1.6
SOX3P41225 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
SOX3P41225 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SOX3P41225 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
SOX3P41225 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
SOX3P41225 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.03□□□□□ -1.6
SOX3P41225 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SOX3P41225 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.03□□□□□ -1.6
SOX3P41225 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
SOX3P41225 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 131 ms