Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
HOXA9P31269 AP000797.2-201ENST00000475768 606 ntBASIC5.5□□□□□ -1.53
HOXA9P31269 AC135999.1-201ENST00000478962 479 ntBASIC5.5□□□□□ -1.53
HOXA9P31269 AC105233.1-201ENST00000498840 781 ntBASIC5.5□□□□□ -1.53
HOXA9P31269 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.5□□□□□ -1.53
HOXA9P31269 OR4A17P-201ENST00000526032 904 ntBASIC5.5□□□□□ -1.53
HOXA9P31269 OR8Q1P-201ENST00000526467 655 ntBASIC5.5□□□□□ -1.53
HOXA9P31269 AC005000.1-201ENST00000536192 288 ntBASIC5.5□□□□□ -1.53
HOXA9P31269 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.5□□□□□ -1.53
HOXA9P31269 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.5□□□□□ -1.53
HOXA9P31269 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HOXA9P31269 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.5□□□□□ -1.53
HOXA9P31269 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
HOXA9P31269 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
HOXA9P31269 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.5□□□□□ -1.53
HOXA9P31269 AL139124.1-201ENST00000609123 421 ntBASIC5.5□□□□□ -1.53
HOXA9P31269 AC244107.2-201ENST00000611773 76 ntBASIC5.5□□□□□ -1.53
HOXA9P31269 AC015660.5-201ENST00000623238 564 ntBASIC5.5□□□□□ -1.53
HOXA9P31269 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC5.5□□□□□ -1.53
HOXA9P31269 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HOXA9P31269 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.5□□□□□ -1.53
HOXA9P31269 AC079097.1-201ENST00000512187 1399 ntBASIC5.5□□□□□ -1.53
HOXA9P31269 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HOXA9P31269 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HOXA9P31269 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HOXA9P31269 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.5□□□□□ -1.53
HOXA9P31269 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HOXA9P31269 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.5□□□□□ -1.53
HOXA9P31269 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HOXA9P31269 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
HOXA9P31269 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HOXA9P31269 XKRY2-202ENST00000623874 1581 ntBASIC5.5□□□□□ -1.53
HOXA9P31269 XKRY-202ENST00000624960 1581 ntBASIC5.5□□□□□ -1.53
HOXA9P31269 CDY11P-201ENST00000447168 1651 ntBASIC5.5□□□□□ -1.53
HOXA9P31269 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
HOXA9P31269 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.5□□□□□ -1.53
HOXA9P31269 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
HOXA9P31269 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HOXA9P31269 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HOXA9P31269 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
HOXA9P31269 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
HOXA9P31269 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HOXA9P31269 MIPEPP2-201ENST00000422560 1819 ntBASIC5.49□□□□□ -1.53
HOXA9P31269 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HOXA9P31269 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.49□□□□□ -1.53
HOXA9P31269 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.49□□□□□ -1.53
HOXA9P31269 AC092681.1-201ENST00000297369 291 ntBASIC5.49□□□□□ -1.53
HOXA9P31269 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HOXA9P31269 OR8V1P-201ENST00000395193 873 ntBASIC5.49□□□□□ -1.53
HOXA9P31269 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HOXA9P31269 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.49□□□□□ -1.53
HOXA9P31269 GJA6P-201ENST00000415117 1042 ntBASIC5.49□□□□□ -1.53
HOXA9P31269 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.49□□□□□ -1.53
HOXA9P31269 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.49□□□□□ -1.53
HOXA9P31269 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.49□□□□□ -1.53
HOXA9P31269 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.49□□□□□ -1.53
HOXA9P31269 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC5.49□□□□□ -1.53
HOXA9P31269 AC073072.2-201ENST00000447425 348 ntBASIC5.49□□□□□ -1.53
HOXA9P31269 RN7SL591P-201ENST00000496150 292 ntBASIC5.49□□□□□ -1.53
HOXA9P31269 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.49□□□□□ -1.53
HOXA9P31269 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC5.49□□□□□ -1.53
HOXA9P31269 AC138409.2-202ENST00000507274 458 ntBASIC5.49□□□□□ -1.53
HOXA9P31269 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
HOXA9P31269 AC008033.2-201ENST00000542626 177 ntBASIC5.49□□□□□ -1.53
HOXA9P31269 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC5.49□□□□□ -1.53
HOXA9P31269 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.49□□□□□ -1.53
HOXA9P31269 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
HOXA9P31269 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC5.49□□□□□ -1.53
HOXA9P31269 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5.49□□□□□ -1.53
HOXA9P31269 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.49□□□□□ -1.53
HOXA9P31269 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.49□□□□□ -1.53
HOXA9P31269 AC087783.2-201ENST00000605070 562 ntBASIC5.49□□□□□ -1.53
HOXA9P31269 AC015712.7-201ENST00000615211 635 ntBASIC5.49□□□□□ -1.53
HOXA9P31269 AC087385.3-201ENST00000620477 187 ntBASIC5.49□□□□□ -1.53
HOXA9P31269 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.49□□□□□ -1.53
HOXA9P31269 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.49□□□□□ -1.53
HOXA9P31269 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
HOXA9P31269 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.49□□□□□ -1.53
HOXA9P31269 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
HOXA9P31269 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
HOXA9P31269 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
HOXA9P31269 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HOXA9P31269 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
HOXA9P31269 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HOXA9P31269 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.48□□□□□ -1.53
HOXA9P31269 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HOXA9P31269 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
HOXA9P31269 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HOXA9P31269 DPY19L2P2-203ENST00000435536 1858 ntBASIC5.48□□□□□ -1.53
HOXA9P31269 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.48□□□□□ -1.53
HOXA9P31269 AC012618.3-205ENST00000637896 1496 ntBASIC5.48□□□□□ -1.53
HOXA9P31269 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.48□□□□□ -1.53
HOXA9P31269 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
HOXA9P31269 MIR133A2-201ENST00000347538 102 ntBASIC5.48□□□□□ -1.53
HOXA9P31269 RN7SKP149-201ENST00000363008 344 ntBASIC5.48□□□□□ -1.53
HOXA9P31269 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
HOXA9P31269 COX6B1P1-201ENST00000415962 213 ntBASIC5.48□□□□□ -1.53
HOXA9P31269 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HOXA9P31269 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC5.48□□□□□ -1.53
HOXA9P31269 AL161722.2-201ENST00000434731 981 ntBASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms