Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 RMST-209ENST00000639542 3269 ntTSL 5 BASIC6.16□□□□□ -1.42
TOP1P11387 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
TOP1P11387 AP001284.1-201ENST00000528393 2118 ntBASIC6.16□□□□□ -1.42
TOP1P11387 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
TOP1P11387 NUDT19P3-201ENST00000404698 555 ntBASIC6.16□□□□□ -1.42
TOP1P11387 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC6.16□□□□□ -1.42
TOP1P11387 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC6.16□□□□□ -1.42
TOP1P11387 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC6.16□□□□□ -1.42
TOP1P11387 LYPLA1P1-201ENST00000434514 622 ntBASIC6.16□□□□□ -1.42
TOP1P11387 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC6.16□□□□□ -1.42
TOP1P11387 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC6.16□□□□□ -1.42
TOP1P11387 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC6.16□□□□□ -1.42
TOP1P11387 AC009127.1-201ENST00000467090 155 ntBASIC6.16□□□□□ -1.42
TOP1P11387 CBX1P5-201ENST00000475330 559 ntBASIC6.16□□□□□ -1.42
TOP1P11387 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC6.16□□□□□ -1.42
TOP1P11387 GTF2F2P1-201ENST00000511083 675 ntBASIC6.16□□□□□ -1.42
TOP1P11387 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC6.16□□□□□ -1.42
TOP1P11387 RNA5SP230-201ENST00000517039 122 ntBASIC6.16□□□□□ -1.42
TOP1P11387 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC6.16□□□□□ -1.42
TOP1P11387 AC022360.1-201ENST00000521058 340 ntBASIC6.16□□□□□ -1.42
TOP1P11387 AC138832.1-201ENST00000522871 556 ntBASIC6.16□□□□□ -1.42
TOP1P11387 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC6.16□□□□□ -1.42
TOP1P11387 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC6.16□□□□□ -1.42
TOP1P11387 AL359219.2-201ENST00000555184 348 ntBASIC6.16□□□□□ -1.42
TOP1P11387 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC6.16□□□□□ -1.42
TOP1P11387 AC105036.1-201ENST00000566222 271 ntBASIC6.16□□□□□ -1.42
TOP1P11387 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC6.16□□□□□ -1.42
TOP1P11387 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC6.16□□□□□ -1.42
TOP1P11387 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC6.16□□□□□ -1.42
TOP1P11387 AL356608.1-201ENST00000610034 820 ntBASIC6.16□□□□□ -1.42
TOP1P11387 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
TOP1P11387 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
TOP1P11387 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
TOP1P11387 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
TOP1P11387 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
TOP1P11387 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
TOP1P11387 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC6.16□□□□□ -1.42
TOP1P11387 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
TOP1P11387 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC6.15□□□□□ -1.42
TOP1P11387 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
TOP1P11387 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
TOP1P11387 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC6.15□□□□□ -1.42
TOP1P11387 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC6.15□□□□□ -1.42
TOP1P11387 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC6.15□□□□□ -1.42
TOP1P11387 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC6.15□□□□□ -1.42
TOP1P11387 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
TOP1P11387 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
TOP1P11387 MRRFP1-201ENST00000435941 1675 ntBASIC6.15□□□□□ -1.42
TOP1P11387 RNA5SP507-201ENST00000363603 121 ntBASIC6.15□□□□□ -1.42
TOP1P11387 SNORA70-201ENST00000384436 135 ntBASIC6.15□□□□□ -1.42
TOP1P11387 MIR765-201ENST00000390226 114 ntBASIC6.15□□□□□ -1.42
TOP1P11387 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
TOP1P11387 U3.36-201ENST00000408418 213 ntBASIC6.15□□□□□ -1.42
TOP1P11387 RNU6ATAC21P-201ENST00000408656 126 ntBASIC6.15□□□□□ -1.42
TOP1P11387 AL445213.1-201ENST00000412589 747 ntBASIC6.15□□□□□ -1.42
TOP1P11387 RPL23AP27-201ENST00000415161 451 ntBASIC6.15□□□□□ -1.42
TOP1P11387 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
TOP1P11387 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC6.15□□□□□ -1.42
TOP1P11387 DNAJB5P1-201ENST00000454004 806 ntBASIC6.15□□□□□ -1.42
TOP1P11387 AP000797.2-201ENST00000475768 606 ntBASIC6.15□□□□□ -1.42
TOP1P11387 BX284632.1-201ENST00000478218 541 ntBASIC6.15□□□□□ -1.42
TOP1P11387 RPS24P16-201ENST00000497294 392 ntBASIC6.15□□□□□ -1.42
TOP1P11387 AC012400.1-201ENST00000518452 381 ntBASIC6.15□□□□□ -1.42
TOP1P11387 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC6.15□□□□□ -1.42
TOP1P11387 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC6.15□□□□□ -1.42
TOP1P11387 APPL2-203ENST00000546731 684 ntTSL 2 BASIC6.15□□□□□ -1.42
TOP1P11387 AC044860.2-201ENST00000561005 179 ntBASIC6.15□□□□□ -1.42
TOP1P11387 MIR3691-201ENST00000578066 90 ntBASIC6.15□□□□□ -1.42
TOP1P11387 MIR4660-201ENST00000583549 74 ntBASIC6.15□□□□□ -1.42
TOP1P11387 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
TOP1P11387 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC6.15□□□□□ -1.42
TOP1P11387 AC009597.2-201ENST00000604659 592 ntBASIC6.15□□□□□ -1.42
TOP1P11387 TAS2R6P-201ENST00000605022 826 ntBASIC6.15□□□□□ -1.42
TOP1P11387 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC6.15□□□□□ -1.42
TOP1P11387 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC6.15□□□□□ -1.42
TOP1P11387 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.42
TOP1P11387 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC6.15□□□□□ -1.43
TOP1P11387 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC6.15□□□□□ -1.43
TOP1P11387 AC092376.2-201ENST00000622621 4116 ntBASIC6.15□□□□□ -1.43
TOP1P11387 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC6.15□□□□□ -1.43
TOP1P11387 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC6.15□□□□□ -1.43
TOP1P11387 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
TOP1P11387 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
TOP1P11387 PANDAR-201ENST00000629595 1506 ntBASIC6.15□□□□□ -1.43
TOP1P11387 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC6.14□□□□□ -1.43
TOP1P11387 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
TOP1P11387 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC6.14□□□□□ -1.43
TOP1P11387 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
TOP1P11387 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC6.14□□□□□ -1.43
TOP1P11387 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC6.14□□□□□ -1.43
TOP1P11387 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC6.14□□□□□ -1.43
TOP1P11387 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
TOP1P11387 RNU1-106P-201ENST00000384382 164 ntBASIC6.14□□□□□ -1.43
TOP1P11387 MIR600-201ENST00000385007 98 ntBASIC6.14□□□□□ -1.43
TOP1P11387 AL358178.1-201ENST00000407698 397 ntBASIC6.14□□□□□ -1.43
TOP1P11387 RN7SKP126-201ENST00000411143 300 ntBASIC6.14□□□□□ -1.43
TOP1P11387 EI24P4-201ENST00000423683 1078 ntBASIC6.14□□□□□ -1.43
TOP1P11387 RPS4XP16-201ENST00000427198 791 ntBASIC6.14□□□□□ -1.43
TOP1P11387 PTMAP6-201ENST00000439110 327 ntBASIC6.14□□□□□ -1.43
TOP1P11387 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 388.5 ms