Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AL049745.1-201ENST00000433953 286 ntBASIC5.85□□□□□ -1.47
RB1P06400 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC5.85□□□□□ -1.47
RB1P06400 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RB1P06400 SNRPFP2-201ENST00000440710 251 ntBASIC5.85□□□□□ -1.47
RB1P06400 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RB1P06400 AC089999.1-201ENST00000460336 374 ntBASIC5.85□□□□□ -1.47
RB1P06400 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.85□□□□□ -1.47
RB1P06400 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RB1P06400 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.85□□□□□ -1.47
RB1P06400 AC093815.1-201ENST00000508637 280 ntBASIC5.85□□□□□ -1.47
RB1P06400 MTND6P2-201ENST00000512226 524 ntBASIC5.85□□□□□ -1.47
RB1P06400 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC5.85□□□□□ -1.47
RB1P06400 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC5.85□□□□□ -1.47
RB1P06400 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC5.85□□□□□ -1.47
RB1P06400 PMS2P3-207ENST00000529061 717 ntBASIC5.85□□□□□ -1.47
RB1P06400 AP003168.1-201ENST00000530091 307 ntBASIC5.85□□□□□ -1.47
RB1P06400 RPL10P14-201ENST00000565265 298 ntBASIC5.85□□□□□ -1.47
RB1P06400 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.85□□□□□ -1.47
RB1P06400 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.85□□□□□ -1.47
RB1P06400 MIR3934-201ENST00000579806 107 ntBASIC5.85□□□□□ -1.47
RB1P06400 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.85□□□□□ -1.47
RB1P06400 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.85□□□□□ -1.47
RB1P06400 FAM25E-202ENST00000608562 189 ntBASIC5.85□□□□□ -1.47
RB1P06400 AC015922.4-201ENST00000612568 690 ntBASIC5.85□□□□□ -1.47
RB1P06400 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.85□□□□□ -1.47
RB1P06400 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.85□□□□□ -1.47
RB1P06400 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.85□□□□□ -1.47
RB1P06400 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RB1P06400 AC003985.2-201ENST00000562268 1669 ntBASIC5.85□□□□□ -1.47
RB1P06400 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.85□□□□□ -1.47
RB1P06400 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.85□□□□□ -1.47
RB1P06400 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.85□□□□□ -1.47
RB1P06400 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RB1P06400 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
RB1P06400 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.84□□□□□ -1.47
RB1P06400 AC012618.3-205ENST00000637896 1496 ntBASIC5.84□□□□□ -1.47
RB1P06400 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.84□□□□□ -1.47
RB1P06400 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
RB1P06400 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.84□□□□□ -1.47
RB1P06400 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
RB1P06400 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
RB1P06400 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RB1P06400 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RB1P06400 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
RB1P06400 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RB1P06400 GNG5P2-201ENST00000372054 207 ntBASIC5.84□□□□□ -1.47
RB1P06400 AL121977.1-201ENST00000401636 979 ntBASIC5.84□□□□□ -1.47
RB1P06400 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.84□□□□□ -1.47
RB1P06400 AC211486.3-201ENST00000412694 621 ntBASIC5.84□□□□□ -1.47
RB1P06400 FAR2P2-201ENST00000413041 594 ntBASIC5.84□□□□□ -1.47
RB1P06400 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC5.84□□□□□ -1.47
RB1P06400 FAR2P4-202ENST00000425399 584 ntBASIC5.84□□□□□ -1.47
RB1P06400 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RB1P06400 AC092017.2-201ENST00000427600 362 ntBASIC5.84□□□□□ -1.47
RB1P06400 RBMY2QP-201ENST00000429799 1147 ntBASIC5.84□□□□□ -1.47
RB1P06400 MTCO1P45-201ENST00000431457 267 ntBASIC5.84□□□□□ -1.47
RB1P06400 AL138787.1-202ENST00000437804 898 ntBASIC5.84□□□□□ -1.47
RB1P06400 ARL5AP3-201ENST00000439327 386 ntBASIC5.84□□□□□ -1.47
RB1P06400 CEACAMP9-201ENST00000442990 513 ntBASIC5.84□□□□□ -1.47
RB1P06400 AL500527.1-201ENST00000448532 255 ntBASIC5.84□□□□□ -1.47
RB1P06400 HGF-207ENST00000453018 721 ntTSL 3 BASIC5.84□□□□□ -1.47
RB1P06400 AZGP1P2-201ENST00000454506 345 ntBASIC5.84□□□□□ -1.47
RB1P06400 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.84□□□□□ -1.47
RB1P06400 GYG1P1-201ENST00000460864 698 ntBASIC5.84□□□□□ -1.47
RB1P06400 SNRPCP3-201ENST00000474888 476 ntBASIC5.84□□□□□ -1.47
RB1P06400 AC090114.3-201ENST00000479267 829 ntBASIC5.84□□□□□ -1.47
RB1P06400 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC5.84□□□□□ -1.47
RB1P06400 TRBV5-2-201ENST00000489095 273 ntBASIC5.84□□□□□ -1.47
RB1P06400 RPS4XP20-201ENST00000505751 772 ntBASIC5.84□□□□□ -1.47
RB1P06400 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.84□□□□□ -1.47
RB1P06400 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.84□□□□□ -1.47
RB1P06400 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.84□□□□□ -1.47
RB1P06400 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.84□□□□□ -1.47
RB1P06400 AP001804.2-201ENST00000533932 910 ntBASIC5.84□□□□□ -1.47
RB1P06400 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC5.84□□□□□ -1.47
RB1P06400 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.84□□□□□ -1.47
RB1P06400 AC139697.1-201ENST00000548429 745 ntBASIC5.84□□□□□ -1.47
RB1P06400 AC008147.3-201ENST00000548666 354 ntBASIC5.84□□□□□ -1.47
RB1P06400 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RB1P06400 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.84□□□□□ -1.47
RB1P06400 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC5.84□□□□□ -1.47
RB1P06400 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.84□□□□□ -1.47
RB1P06400 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.84□□□□□ -1.47
RB1P06400 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.84□□□□□ -1.47
RB1P06400 AC012213.4-201ENST00000606457 354 ntBASIC5.84□□□□□ -1.47
RB1P06400 AC015802.5-201ENST00000607478 399 ntBASIC5.84□□□□□ -1.47
RB1P06400 OR8G7P-201ENST00000616658 848 ntBASIC5.84□□□□□ -1.47
RB1P06400 CYP4F35P-202ENST00000636121 390 ntBASIC5.84□□□□□ -1.47
RB1P06400 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
RB1P06400 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.84□□□□□ -1.47
RB1P06400 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.84□□□□□ -1.47
RB1P06400 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RB1P06400 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
RB1P06400 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.84□□□□□ -1.47
RB1P06400 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RB1P06400 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RB1P06400 AC068870.3-201ENST00000625077 2536 ntBASIC5.84□□□□□ -1.47
RB1P06400 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
RB1P06400 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
RB1P06400 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.84□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms