Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
VPS4BO75351 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
VPS4BO75351 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.87□□□□□ -1.47
VPS4BO75351 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
VPS4BO75351 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
VPS4BO75351 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
VPS4BO75351 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
VPS4BO75351 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
VPS4BO75351 AC083837.1-201ENST00000565297 2994 ntBASIC5.87□□□□□ -1.47
VPS4BO75351 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
VPS4BO75351 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.87□□□□□ -1.47
VPS4BO75351 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
VPS4BO75351 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.87□□□□□ -1.47
VPS4BO75351 RNU4-28P-201ENST00000364739 141 ntBASIC5.87□□□□□ -1.47
VPS4BO75351 OR13C3-201ENST00000374781 1108 ntBASIC5.87□□□□□ -1.47
VPS4BO75351 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.87□□□□□ -1.47
VPS4BO75351 AC087752.1-201ENST00000391360 558 ntBASIC5.87□□□□□ -1.47
VPS4BO75351 GAPDHP15-201ENST00000398586 975 ntBASIC5.87□□□□□ -1.47
VPS4BO75351 LYPLA1P3-201ENST00000402650 695 ntBASIC5.87□□□□□ -1.47
VPS4BO75351 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
VPS4BO75351 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC5.87□□□□□ -1.47
VPS4BO75351 TRIM60P5Y-201ENST00000413946 574 ntBASIC5.87□□□□□ -1.47
VPS4BO75351 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC5.87□□□□□ -1.47
VPS4BO75351 USP9YP21-201ENST00000420603 432 ntBASIC5.87□□□□□ -1.47
VPS4BO75351 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
VPS4BO75351 USP9YP24-201ENST00000434374 697 ntBASIC5.87□□□□□ -1.47
VPS4BO75351 AC092473.1-201ENST00000441098 221 ntBASIC5.87□□□□□ -1.47
VPS4BO75351 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC5.87□□□□□ -1.47
VPS4BO75351 USP9YP17-201ENST00000444617 696 ntBASIC5.87□□□□□ -1.47
VPS4BO75351 AL591719.1-201ENST00000444669 744 ntBASIC5.87□□□□□ -1.47
VPS4BO75351 AL161636.2-201ENST00000445179 927 ntBASIC5.87□□□□□ -1.47
VPS4BO75351 NDUFAF4P2-201ENST00000445374 520 ntBASIC5.87□□□□□ -1.47
VPS4BO75351 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.87□□□□□ -1.47
VPS4BO75351 Z83846.1-201ENST00000446798 265 ntBASIC5.87□□□□□ -1.47
VPS4BO75351 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC5.87□□□□□ -1.47
VPS4BO75351 HIGD1AP16-201ENST00000450986 258 ntBASIC5.87□□□□□ -1.47
VPS4BO75351 AC096992.1-201ENST00000459808 709 ntBASIC5.87□□□□□ -1.47
VPS4BO75351 AC026348.1-201ENST00000462549 1053 ntBASIC5.87□□□□□ -1.47
VPS4BO75351 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.87□□□□□ -1.47
VPS4BO75351 RN7SL629P-201ENST00000489622 285 ntBASIC5.87□□□□□ -1.47
VPS4BO75351 PSMA2P2-201ENST00000504319 686 ntBASIC5.87□□□□□ -1.47
VPS4BO75351 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.87□□□□□ -1.47
VPS4BO75351 GOLGA5P1-201ENST00000507317 980 ntBASIC5.87□□□□□ -1.47
VPS4BO75351 AC021106.1-201ENST00000509020 1058 ntBASIC5.87□□□□□ -1.47
VPS4BO75351 AC090958.1-201ENST00000511122 351 ntBASIC5.87□□□□□ -1.47
VPS4BO75351 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
VPS4BO75351 SETP21-201ENST00000514799 892 ntBASIC5.87□□□□□ -1.47
VPS4BO75351 SNORD46.2-201ENST00000516021 102 ntBASIC5.87□□□□□ -1.47
VPS4BO75351 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.87□□□□□ -1.47
VPS4BO75351 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.87□□□□□ -1.47
VPS4BO75351 UBTFL10-201ENST00000528532 562 ntBASIC5.87□□□□□ -1.47
VPS4BO75351 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.87□□□□□ -1.47
VPS4BO75351 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.87□□□□□ -1.47
VPS4BO75351 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.87□□□□□ -1.47
VPS4BO75351 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.87□□□□□ -1.47
VPS4BO75351 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
VPS4BO75351 AL163952.1-202ENST00000569625 600 ntBASIC5.87□□□□□ -1.47
VPS4BO75351 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.87□□□□□ -1.47
VPS4BO75351 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.87□□□□□ -1.47
VPS4BO75351 BNIP3P24-201ENST00000593398 557 ntBASIC5.87□□□□□ -1.47
VPS4BO75351 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC5.87□□□□□ -1.47
VPS4BO75351 AC002487.1-201ENST00000604565 994 ntBASIC5.87□□□□□ -1.47
VPS4BO75351 AC114878.2-201ENST00000604863 1251 ntBASIC5.87□□□□□ -1.47
VPS4BO75351 AC126175.1-201ENST00000617041 758 ntBASIC5.87□□□□□ -1.47
VPS4BO75351 AL355974.3-201ENST00000617383 467 ntBASIC5.87□□□□□ -1.47
VPS4BO75351 AC006386.1-201ENST00000619436 415 ntBASIC5.87□□□□□ -1.47
VPS4BO75351 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
VPS4BO75351 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
VPS4BO75351 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
VPS4BO75351 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
VPS4BO75351 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.87□□□□□ -1.47
VPS4BO75351 AC024587.1-201ENST00000505925 2157 ntBASIC5.87□□□□□ -1.47
VPS4BO75351 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
VPS4BO75351 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
VPS4BO75351 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
VPS4BO75351 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
VPS4BO75351 MTCO1P15-201ENST00000529569 1526 ntBASIC5.86□□□□□ -1.47
VPS4BO75351 AL355578.1-201ENST00000607405 1328 ntBASIC5.86□□□□□ -1.47
VPS4BO75351 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
VPS4BO75351 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
VPS4BO75351 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
VPS4BO75351 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
VPS4BO75351 RNA5SP346-201ENST00000363541 121 ntBASIC5.86□□□□□ -1.47
VPS4BO75351 RNU105B-201ENST00000364478 208 ntBASIC5.86□□□□□ -1.47
VPS4BO75351 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
VPS4BO75351 EIF4A1P1-201ENST00000420241 934 ntBASIC5.86□□□□□ -1.47
VPS4BO75351 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.86□□□□□ -1.47
VPS4BO75351 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.86□□□□□ -1.47
VPS4BO75351 OSTCP5-201ENST00000425293 453 ntBASIC5.86□□□□□ -1.47
VPS4BO75351 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC5.86□□□□□ -1.47
VPS4BO75351 OR3D1P-201ENST00000438288 955 ntBASIC5.86□□□□□ -1.47
VPS4BO75351 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.86□□□□□ -1.47
VPS4BO75351 VN1R25P-201ENST00000443385 738 ntBASIC5.86□□□□□ -1.47
VPS4BO75351 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
VPS4BO75351 AL157827.1-201ENST00000447622 132 ntBASIC5.86□□□□□ -1.47
VPS4BO75351 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.86□□□□□ -1.47
VPS4BO75351 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.86□□□□□ -1.47
VPS4BO75351 AC079080.1-201ENST00000479841 822 ntBASIC5.86□□□□□ -1.47
VPS4BO75351 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC5.86□□□□□ -1.47
VPS4BO75351 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 136.7 ms