Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 AC114774.1-201ENST00000507410 1770 ntBASIC5.82□□□□□ -1.48
SNX9Q9Y5X1 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
SNX9Q9Y5X1 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.82□□□□□ -1.48
SNX9Q9Y5X1 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SNX9Q9Y5X1 AL603750.1-201ENST00000624216 1717 ntBASIC5.82□□□□□ -1.48
SNX9Q9Y5X1 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
SNX9Q9Y5X1 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SNX9Q9Y5X1 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SNX9Q9Y5X1 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.81□□□□□ -1.48
SNX9Q9Y5X1 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SNX9Q9Y5X1 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SNX9Q9Y5X1 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SNX9Q9Y5X1 AC004656.1-201ENST00000568479 4951 ntBASIC5.81□□□□□ -1.48
SNX9Q9Y5X1 AC024341.1-201ENST00000526444 1552 ntBASIC5.81□□□□□ -1.48
SNX9Q9Y5X1 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.81□□□□□ -1.48
SNX9Q9Y5X1 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SNX9Q9Y5X1 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.81□□□□□ -1.48
SNX9Q9Y5X1 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
SNX9Q9Y5X1 AC092681.1-201ENST00000297369 291 ntBASIC5.81□□□□□ -1.48
SNX9Q9Y5X1 U3.28-201ENST00000391249 210 ntBASIC5.81□□□□□ -1.48
SNX9Q9Y5X1 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SNX9Q9Y5X1 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.81□□□□□ -1.48
SNX9Q9Y5X1 RPL12P17-201ENST00000432393 498 ntBASIC5.81□□□□□ -1.48
SNX9Q9Y5X1 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.81□□□□□ -1.48
SNX9Q9Y5X1 AC073465.2-201ENST00000440938 498 ntBASIC5.81□□□□□ -1.48
SNX9Q9Y5X1 AP002371.1-201ENST00000463604 433 ntBASIC5.81□□□□□ -1.48
SNX9Q9Y5X1 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.81□□□□□ -1.48
SNX9Q9Y5X1 RN7SL177P-201ENST00000476596 299 ntBASIC5.81□□□□□ -1.48
SNX9Q9Y5X1 AC021106.1-201ENST00000509020 1058 ntBASIC5.81□□□□□ -1.48
SNX9Q9Y5X1 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.81□□□□□ -1.48
SNX9Q9Y5X1 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.81□□□□□ -1.48
SNX9Q9Y5X1 HMGB1P40-201ENST00000525121 540 ntBASIC5.81□□□□□ -1.48
SNX9Q9Y5X1 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5.81□□□□□ -1.48
SNX9Q9Y5X1 AP004607.2-201ENST00000533949 322 ntBASIC5.81□□□□□ -1.48
SNX9Q9Y5X1 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SNX9Q9Y5X1 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.81□□□□□ -1.48
SNX9Q9Y5X1 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.81□□□□□ -1.48
SNX9Q9Y5X1 AC015802.5-201ENST00000607478 399 ntBASIC5.81□□□□□ -1.48
SNX9Q9Y5X1 AC096586.2-201ENST00000610260 441 ntBASIC5.81□□□□□ -1.48
SNX9Q9Y5X1 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SNX9Q9Y5X1 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.81□□□□□ -1.48
SNX9Q9Y5X1 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
SNX9Q9Y5X1 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC5.81□□□□□ -1.48
SNX9Q9Y5X1 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.81□□□□□ -1.48
SNX9Q9Y5X1 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
SNX9Q9Y5X1 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SNX9Q9Y5X1 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.81□□□□□ -1.48
SNX9Q9Y5X1 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
SNX9Q9Y5X1 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SNX9Q9Y5X1 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.81□□□□□ -1.48
SNX9Q9Y5X1 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.81□□□□□ -1.48
SNX9Q9Y5X1 AC079097.1-201ENST00000512187 1399 ntBASIC5.8□□□□□ -1.48
SNX9Q9Y5X1 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SNX9Q9Y5X1 AL138820.1-201ENST00000617901 5305 ntBASIC5.8□□□□□ -1.48
SNX9Q9Y5X1 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
SNX9Q9Y5X1 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SNX9Q9Y5X1 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.8□□□□□ -1.48
SNX9Q9Y5X1 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.8□□□□□ -1.48
SNX9Q9Y5X1 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SNX9Q9Y5X1 AL359715.3-201ENST00000569267 2123 ntBASIC5.8□□□□□ -1.48
SNX9Q9Y5X1 AC007342.5-201ENST00000571340 2142 ntBASIC5.8□□□□□ -1.48
SNX9Q9Y5X1 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SNX9Q9Y5X1 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SNX9Q9Y5X1 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.8□□□□□ -1.48
SNX9Q9Y5X1 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SNX9Q9Y5X1 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.8□□□□□ -1.48
SNX9Q9Y5X1 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
SNX9Q9Y5X1 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SNX9Q9Y5X1 RNA5SP339-201ENST00000390987 122 ntBASIC5.8□□□□□ -1.48
SNX9Q9Y5X1 AC005522.1-201ENST00000395416 346 ntBASIC5.8□□□□□ -1.48
SNX9Q9Y5X1 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
SNX9Q9Y5X1 MIR1286-201ENST00000408112 78 ntBASIC5.8□□□□□ -1.48
SNX9Q9Y5X1 AL121878.1-201ENST00000418638 859 ntBASIC5.8□□□□□ -1.48
SNX9Q9Y5X1 AL355433.1-201ENST00000422804 300 ntBASIC5.8□□□□□ -1.48
SNX9Q9Y5X1 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC5.8□□□□□ -1.48
SNX9Q9Y5X1 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.8□□□□□ -1.48
SNX9Q9Y5X1 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC5.8□□□□□ -1.48
SNX9Q9Y5X1 Z85994.2-201ENST00000434327 452 ntBASIC5.8□□□□□ -1.48
SNX9Q9Y5X1 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC5.8□□□□□ -1.48
SNX9Q9Y5X1 AP000949.1-201ENST00000438328 629 ntBASIC5.8□□□□□ -1.48
SNX9Q9Y5X1 MTCO3P43-201ENST00000440974 771 ntBASIC5.8□□□□□ -1.48
SNX9Q9Y5X1 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.8□□□□□ -1.48
SNX9Q9Y5X1 AC092754.1-201ENST00000472975 479 ntBASIC5.8□□□□□ -1.48
SNX9Q9Y5X1 COPS8P2-201ENST00000473228 627 ntBASIC5.8□□□□□ -1.48
SNX9Q9Y5X1 RPL7P39-201ENST00000481157 744 ntBASIC5.8□□□□□ -1.48
SNX9Q9Y5X1 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.8□□□□□ -1.48
SNX9Q9Y5X1 RPL37AP8-201ENST00000494116 276 ntBASIC5.8□□□□□ -1.48
SNX9Q9Y5X1 PGAM1P13-201ENST00000507497 754 ntBASIC5.8□□□□□ -1.48
SNX9Q9Y5X1 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.8□□□□□ -1.48
SNX9Q9Y5X1 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.8□□□□□ -1.48
SNX9Q9Y5X1 AC111000.6-201ENST00000514471 709 ntBASIC5.8□□□□□ -1.48
SNX9Q9Y5X1 MTND1P36-201ENST00000522384 936 ntBASIC5.8□□□□□ -1.48
SNX9Q9Y5X1 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC5.8□□□□□ -1.48
SNX9Q9Y5X1 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC5.8□□□□□ -1.48
SNX9Q9Y5X1 OR8Q1P-201ENST00000526467 655 ntBASIC5.8□□□□□ -1.48
SNX9Q9Y5X1 AC130364.2-201ENST00000528639 604 ntBASIC5.8□□□□□ -1.48
SNX9Q9Y5X1 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.8□□□□□ -1.48
SNX9Q9Y5X1 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.8□□□□□ -1.48
SNX9Q9Y5X1 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.8□□□□□ -1.48
SNX9Q9Y5X1 MIR1269B-201ENST00000580405 75 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms