Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CLIP4Q8N3C7 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CLIP4Q8N3C7 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CLIP4Q8N3C7 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
CLIP4Q8N3C7 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.23□□□□□ -1.57
CLIP4Q8N3C7 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CLIP4Q8N3C7 PCAT14-202ENST00000627127 3935 ntBASIC5.23□□□□□ -1.57
CLIP4Q8N3C7 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
CLIP4Q8N3C7 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CLIP4Q8N3C7 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.23□□□□□ -1.57
CLIP4Q8N3C7 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
CLIP4Q8N3C7 RNU1-150P-201ENST00000362491 162 ntBASIC5.23□□□□□ -1.57
CLIP4Q8N3C7 AC004386.1-201ENST00000393214 761 ntBASIC5.23□□□□□ -1.57
CLIP4Q8N3C7 MIR1203-201ENST00000408812 85 ntBASIC5.23□□□□□ -1.57
CLIP4Q8N3C7 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC5.23□□□□□ -1.57
CLIP4Q8N3C7 AC098592.2-201ENST00000413158 265 ntBASIC5.23□□□□□ -1.57
CLIP4Q8N3C7 OR51A6P-201ENST00000418680 1004 ntBASIC5.23□□□□□ -1.57
CLIP4Q8N3C7 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.23□□□□□ -1.57
CLIP4Q8N3C7 AC092570.3-201ENST00000420113 693 ntBASIC5.23□□□□□ -1.57
CLIP4Q8N3C7 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC5.23□□□□□ -1.57
CLIP4Q8N3C7 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CLIP4Q8N3C7 AC069154.1-201ENST00000432914 542 ntBASIC5.23□□□□□ -1.57
CLIP4Q8N3C7 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC5.23□□□□□ -1.57
CLIP4Q8N3C7 AL645931.1-201ENST00000439737 410 ntBASIC5.23□□□□□ -1.57
CLIP4Q8N3C7 AL513321.1-201ENST00000441175 761 ntBASIC5.23□□□□□ -1.57
CLIP4Q8N3C7 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.23□□□□□ -1.57
CLIP4Q8N3C7 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.23□□□□□ -1.57
CLIP4Q8N3C7 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC5.23□□□□□ -1.57
CLIP4Q8N3C7 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC5.23□□□□□ -1.57
CLIP4Q8N3C7 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.23□□□□□ -1.57
CLIP4Q8N3C7 NAMPTP2-201ENST00000505629 1115 ntBASIC5.23□□□□□ -1.57
CLIP4Q8N3C7 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.23□□□□□ -1.57
CLIP4Q8N3C7 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.23□□□□□ -1.57
CLIP4Q8N3C7 AC114781.3-201ENST00000512083 142 ntBASIC5.23□□□□□ -1.57
CLIP4Q8N3C7 SEC11B-201ENST00000518383 499 ntBASIC5.23□□□□□ -1.57
CLIP4Q8N3C7 OR4V1P-201ENST00000525394 1140 ntBASIC5.23□□□□□ -1.57
CLIP4Q8N3C7 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC5.23□□□□□ -1.57
CLIP4Q8N3C7 OSBPL9P3-201ENST00000534523 595 ntBASIC5.23□□□□□ -1.57
CLIP4Q8N3C7 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.23□□□□□ -1.57
CLIP4Q8N3C7 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.23□□□□□ -1.57
CLIP4Q8N3C7 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.23□□□□□ -1.57
CLIP4Q8N3C7 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC5.23□□□□□ -1.57
CLIP4Q8N3C7 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC5.23□□□□□ -1.57
CLIP4Q8N3C7 AC009779.8-202ENST00000607990 932 ntBASIC5.23□□□□□ -1.57
CLIP4Q8N3C7 AC095038.2-201ENST00000621464 1070 ntBASIC5.23□□□□□ -1.57
CLIP4Q8N3C7 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CLIP4Q8N3C7 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.23□□□□□ -1.57
CLIP4Q8N3C7 HSPD1P7-201ENST00000447985 1686 ntBASIC5.23□□□□□ -1.57
CLIP4Q8N3C7 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.23□□□□□ -1.57
CLIP4Q8N3C7 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CLIP4Q8N3C7 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CLIP4Q8N3C7 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
CLIP4Q8N3C7 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.23□□□□□ -1.57
CLIP4Q8N3C7 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CLIP4Q8N3C7 AC007842.1-201ENST00000597336 2039 ntBASIC5.23□□□□□ -1.57
CLIP4Q8N3C7 IFIT1P1-201ENST00000400497 1449 ntBASIC5.23□□□□□ -1.57
CLIP4Q8N3C7 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CLIP4Q8N3C7 AL034546.1-201ENST00000623740 3693 ntBASIC5.22□□□□□ -1.57
CLIP4Q8N3C7 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.22□□□□□ -1.57
CLIP4Q8N3C7 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CLIP4Q8N3C7 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.22□□□□□ -1.57
CLIP4Q8N3C7 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLIP4Q8N3C7 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
CLIP4Q8N3C7 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
CLIP4Q8N3C7 AC007938.2-201ENST00000604666 2634 ntBASIC5.22□□□□□ -1.57
CLIP4Q8N3C7 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.22□□□□□ -1.57
CLIP4Q8N3C7 TCP1P3-201ENST00000414406 1498 ntBASIC5.22□□□□□ -1.57
CLIP4Q8N3C7 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CLIP4Q8N3C7 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLIP4Q8N3C7 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
CLIP4Q8N3C7 AC112198.2-201ENST00000426589 6996 ntBASIC5.22□□□□□ -1.57
CLIP4Q8N3C7 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.22□□□□□ -1.57
CLIP4Q8N3C7 AL121886.1-201ENST00000358609 435 ntBASIC5.22□□□□□ -1.57
CLIP4Q8N3C7 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.22□□□□□ -1.57
CLIP4Q8N3C7 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLIP4Q8N3C7 EI24P3-201ENST00000399046 1062 ntBASIC5.22□□□□□ -1.57
CLIP4Q8N3C7 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CLIP4Q8N3C7 AL133482.1-201ENST00000415988 498 ntBASIC5.22□□□□□ -1.57
CLIP4Q8N3C7 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.22□□□□□ -1.57
CLIP4Q8N3C7 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.22□□□□□ -1.57
CLIP4Q8N3C7 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.22□□□□□ -1.57
CLIP4Q8N3C7 NPM1P26-201ENST00000426339 738 ntBASIC5.22□□□□□ -1.57
CLIP4Q8N3C7 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC5.22□□□□□ -1.57
CLIP4Q8N3C7 AL512637.2-201ENST00000431287 1256 ntBASIC5.22□□□□□ -1.57
CLIP4Q8N3C7 ZNF965P-201ENST00000432501 817 ntBASIC5.22□□□□□ -1.57
CLIP4Q8N3C7 XKRY2-201ENST00000442362 1093 ntBASIC5.22□□□□□ -1.57
CLIP4Q8N3C7 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC5.22□□□□□ -1.57
CLIP4Q8N3C7 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.22□□□□□ -1.57
CLIP4Q8N3C7 SNORD125-201ENST00000459538 96 ntBASIC5.22□□□□□ -1.57
CLIP4Q8N3C7 CABYRP1-201ENST00000465493 1045 ntBASIC5.22□□□□□ -1.57
CLIP4Q8N3C7 RPS17P15-201ENST00000475609 349 ntBASIC5.22□□□□□ -1.57
CLIP4Q8N3C7 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CLIP4Q8N3C7 RPS17P5-201ENST00000498293 408 ntBASIC5.22□□□□□ -1.57
CLIP4Q8N3C7 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC5.22□□□□□ -1.57
CLIP4Q8N3C7 RNA5SP473-201ENST00000516402 125 ntBASIC5.22□□□□□ -1.57
CLIP4Q8N3C7 RN7SKP253-201ENST00000516424 309 ntBASIC5.22□□□□□ -1.57
CLIP4Q8N3C7 SNORA76.2-201ENST00000517095 137 ntBASIC5.22□□□□□ -1.57
CLIP4Q8N3C7 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.22□□□□□ -1.57
CLIP4Q8N3C7 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.22□□□□□ -1.57
CLIP4Q8N3C7 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms